Click here to switch to the map view.

The map label for this gene is 119947235

Identifier: 119947235

GI number: 119947235

Start: 4446677

End: 4447156

Strand: Direct

Name: 119947235

Synonym: Ping_3633

Alternate gene names: NA

Gene position: 4446677-4447156 (Clockwise)

Preceding gene: 119947234

Following gene: 119947247

Centisome position: 97.52

GC content: 43.54

Gene sequence:

>480_bases
ATGTCGAAGTCAAAAATAATTCGTATCAGTGTCGCTCTGGTTGCAGGTCTGTTGTTTGGTATGGGGATGATTATCTCCGA
AATGGTTAATCCGGCCAAAGTTCTTGGGTTTTTGAATATTACCGGCAATTGGGACCCCAGCCTTGCATTTGTAATGGGCG
GCGCCTTAGCTGTATTCACCCCTATTTATCACTTTGTTATTAAAAAACGTGCGGTTGCTATTAATGGTGATAAATTGAGT
TGGACCAGCAATACCAAGATTGATGGTACATTAATTTCCGGATCGCTTATTTTCGGGGCTGGATGGGGGTTAGCCGGTTT
TTGCCCCGGCCCTGCCATCACAAGTATTGCCAGTGGCAGTAATATCGTTTTGGCTTTTATCTTGAGCATGATTGTCGGCA
TAATATTAGCCAAGCAGTACCAACAAGGCCGGTTACCTTTACCTTTTGTTGGTTACCGGAAGAATATCTGCTCAATTTAG

Upstream 100 bases:

>100_bases
TGGGACGCTTTTCAAAACGTTCAATTTTTGCCACTATCGCCTTTATGGCTTCGGCTTTTATGGTGGTTTTTGTCCGTAAC
CAATTTGGGGCACTTTAACA

Downstream 100 bases:

>100_bases
TCACGCACTAGAGCAGAGTCATATGCCTGCCCTGTTTTATGGGCAGGCATATGACTAATGATGATGGTGATGCTGTTTCA
ATAAACTCTTCGGCACTAGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 159; Mature: 158

Protein sequence:

>159_residues
MSKSKIIRISVALVAGLLFGMGMIISEMVNPAKVLGFLNITGNWDPSLAFVMGGALAVFTPIYHFVIKKRAVAINGDKLS
WTSNTKIDGTLISGSLIFGAGWGLAGFCPGPAITSIASGSNIVLAFILSMIVGIILAKQYQQGRLPLPFVGYRKNICSI

Sequences:

>Translated_159_residues
MSKSKIIRISVALVAGLLFGMGMIISEMVNPAKVLGFLNITGNWDPSLAFVMGGALAVFTPIYHFVIKKRAVAINGDKLS
WTSNTKIDGTLISGSLIFGAGWGLAGFCPGPAITSIASGSNIVLAFILSMIVGIILAKQYQQGRLPLPFVGYRKNICSI
>Mature_158_residues
SKSKIIRISVALVAGLLFGMGMIISEMVNPAKVLGFLNITGNWDPSLAFVMGGALAVFTPIYHFVIKKRAVAINGDKLSW
TSNTKIDGTLISGSLIFGAGWGLAGFCPGPAITSIASGSNIVLAFILSMIVGIILAKQYQQGRLPLPFVGYRKNICSI

Specific function: Unknown

COG id: COG2391

COG function: function code R; Predicted transporter component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0394 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007272 [H]

Pfam domain/function: PF04143 DUF395 [H]

EC number: NA

Molecular weight: Translated: 16819; Mature: 16688

Theoretical pI: Translated: 10.63; Mature: 10.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKSKIIRISVALVAGLLFGMGMIISEMVNPAKVLGFLNITGNWDPSLAFVMGGALAVFT
CCCCCEEEHHHHHHHHHHHHHHHHHHHHCCHHHHEEEEEECCCCCCHHHHHHHHHHHHHH
PIYHFVIKKRAVAINGDKLSWTSNTKIDGTLISGSLIFGAGWGLAGFCPGPAITSIASGS
HHHHHHHHHHHEEECCCEEEECCCCEECEEEEECEEEEECCCCCCCCCCCHHHHHHCCCC
NIVLAFILSMIVGIILAKQYQQGRLPLPFVGYRKNICSI
CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCCC
>Mature Secondary Structure 
SKSKIIRISVALVAGLLFGMGMIISEMVNPAKVLGFLNITGNWDPSLAFVMGGALAVFT
CCCCEEEHHHHHHHHHHHHHHHHHHHHCCHHHHEEEEEECCCCCCHHHHHHHHHHHHHH
PIYHFVIKKRAVAINGDKLSWTSNTKIDGTLISGSLIFGAGWGLAGFCPGPAITSIASGS
HHHHHHHHHHHEEECCCEEEECCCCEECEEEEECEEEEECCCCCCCCCCCHHHHHHCCCC
NIVLAFILSMIVGIILAKQYQQGRLPLPFVGYRKNICSI
CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12533478 [H]