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The map label for this gene is bigR [H]

Identifier: 119947233

GI number: 119947233

Start: 4445917

End: 4446228

Strand: Direct

Name: bigR [H]

Synonym: Ping_3631

Alternate gene names: 119947233

Gene position: 4445917-4446228 (Clockwise)

Preceding gene: 119947230

Following gene: 119947234

Centisome position: 97.51

GC content: 38.46

Gene sequence:

>312_bases
ATGAGTCAATTAGCCGAAATACATGATAAAGCTGGTGAAGTAAGTGAGTTATTAAAAATAATAGCTCATGCGGATCGAAT
GGTGGTGTTATGTTTGTTATCCGATGGTGAAATGGGCGTATCAGAATTACGTGAGCATACAAAATTAAGTCAATCGGCAT
TTTCTCAACATCTGGGTGTATTAAGAAAAAACCACCTCGTAAAGGTAAGAAAAAAGTCGCAACAGGTCTTTTATTCTATT
GCCGATCCGCGCGTAGATTTGCTGCTTAGTGCATTACAACAAGCTTTTTGCCCTCCTGATGTAAGCAATTGA

Upstream 100 bases:

>100_bases
CAATATGATTAGCAAAAGCTAATATACATCTATCTCGTTTAGCTATTGATTAAAAAAACTGCCGAGGTAAAATACTTTGA
CTAACATTAAGGAATTAAAA

Downstream 100 bases:

>100_bases
TTTAAAAATGGTTGGAGTCAATTATGGAAAATTTCACACCTTGGTCAGCATTAGCGGGGGGCGCATTAATTGGTCTTTCT
GCTGCCCTGCTGATGTTGTT

Product: transcriptional regulator of ArsR family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 103; Mature: 102

Protein sequence:

>103_residues
MSQLAEIHDKAGEVSELLKIIAHADRMVVLCLLSDGEMGVSELREHTKLSQSAFSQHLGVLRKNHLVKVRKKSQQVFYSI
ADPRVDLLLSALQQAFCPPDVSN

Sequences:

>Translated_103_residues
MSQLAEIHDKAGEVSELLKIIAHADRMVVLCLLSDGEMGVSELREHTKLSQSAFSQHLGVLRKNHLVKVRKKSQQVFYSI
ADPRVDLLLSALQQAFCPPDVSN
>Mature_102_residues
SQLAEIHDKAGEVSELLKIIAHADRMVVLCLLSDGEMGVSELREHTKLSQSAFSQHLGVLRKNHLVKVRKKSQQVFYSIA
DPRVDLLLSALQQAFCPPDVSN

Specific function: Represses an operon that comprises at least itself and blh. Binds to a palindromic AT-rich sequence spanning the -10 region of the blh promoter and blocks transcription of the operon [H]

COG id: COG0640

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH arsR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1789021, Length=100, Percent_Identity=37, Blast_Score=73, Evalue=4e-15,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001845
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01022 HTH_5 [H]

EC number: NA

Molecular weight: Translated: 11465; Mature: 11334

Theoretical pI: Translated: 7.63; Mature: 7.63

Prosite motif: PS50987 HTH_ARSR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQLAEIHDKAGEVSELLKIIAHADRMVVLCLLSDGEMGVSELREHTKLSQSAFSQHLGV
CCHHHHHHHCCCCHHHHHHHHHCCCHHEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHH
LRKNHLVKVRKKSQQVFYSIADPRVDLLLSALQQAFCPPDVSN
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
SQLAEIHDKAGEVSELLKIIAHADRMVVLCLLSDGEMGVSELREHTKLSQSAFSQHLGV
CHHHHHHHCCCCHHHHHHHHHCCCHHEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHH
LRKNHLVKVRKKSQQVFYSIADPRVDLLLSALQQAFCPPDVSN
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11743193; 11743194 [H]