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The map label for this gene is flgF [H]

Identifier: 119947176

GI number: 119947176

Start: 4391738

End: 4392469

Strand: Reverse

Name: flgF [H]

Synonym: Ping_3574

Alternate gene names: 119947176

Gene position: 4392469-4391738 (Counterclockwise)

Preceding gene: 119947177

Following gene: 119947175

Centisome position: 96.33

GC content: 46.31

Gene sequence:

>732_bases
ATGAACCCTATTTTATTCACCGCCGCCACGAGTGCCAGTAAACTAATGATCTCGCAGCATGTGAGAGCCAATAATATGGC
CCAAGTAAATACCATTGGTTTTAAGGCCGTGCTGGAAAGAACCGTTCCGGTATTCCGCACCGGGGATGGTTTTCTCAGCA
GTGTTACCAGCCGAAGTAACTCTACTTCAATTGACTTCAGCCATGGCAAGCTCTCACAAACCGGACGGCCCTTAGATGTT
GCTATTACCGGAGATGGTTTTTTTGCTGTTCGAGGCAATGATGGTAAAGAAAGCTATACCCGTGCGGGTAATATCAAAGC
GTCAGCGGATGGGGAATTAAGTGTTAATAATAATGCTTTATTGGGCACCGGAGGGGAGCAACTGGTATTACCTGAGCATC
AAAGTCTGACTATCAGTAATAAGGGTATTATCACTGTGATGTCTAATGGTGGAGGTGCGAGCATTGAGGTCGGCCAGATT
AAACTGGTTAATCCGGATACCAATAAACTGACGTTAAACACCTCCGGGACATTTAGCAGCGCGGTGCCACTTGAGGCTTC
TCCTGATGTAGAAATGACTTCGGAGTATCTGGAAAGCGCCAATGTATCGGTCATTTCAGAAATGATTGGGGTGATGACAG
CCACTCGTCAGTATGAAATGCAGGTCAAAATGATGAAAGCGGCAGATCAACTGATAGCCGCAGGTAATAAACTAATCTCG
GCGAGGGGATAA

Upstream 100 bases:

>100_bases
CTGATGACAGCACAACGTAATTATCAGGCGAATACAAAAACTATTTCAACTGCAGATCAGCTGACCAAAGCCTTATTTAA
TGCGGTTTAAAGGATAATCA

Downstream 100 bases:

>100_bases
AGGTATGAACAGTGCTTTATGGATAAGTAAAACGGGGATGGCCGCTCAAGATGCAAAAATGACTGCTATTTCTAATAATT
TAGCGAATATTAATACGGTT

Product: flagellar basal-body rod protein FlgF

Products: NA

Alternate protein names: Putative proximal rod protein [H]

Number of amino acids: Translated: 243; Mature: 243

Protein sequence:

>243_residues
MNPILFTAATSASKLMISQHVRANNMAQVNTIGFKAVLERTVPVFRTGDGFLSSVTSRSNSTSIDFSHGKLSQTGRPLDV
AITGDGFFAVRGNDGKESYTRAGNIKASADGELSVNNNALLGTGGEQLVLPEHQSLTISNKGIITVMSNGGGASIEVGQI
KLVNPDTNKLTLNTSGTFSSAVPLEASPDVEMTSEYLESANVSVISEMIGVMTATRQYEMQVKMMKAADQLIAAGNKLIS
ARG

Sequences:

>Translated_243_residues
MNPILFTAATSASKLMISQHVRANNMAQVNTIGFKAVLERTVPVFRTGDGFLSSVTSRSNSTSIDFSHGKLSQTGRPLDV
AITGDGFFAVRGNDGKESYTRAGNIKASADGELSVNNNALLGTGGEQLVLPEHQSLTISNKGIITVMSNGGGASIEVGQI
KLVNPDTNKLTLNTSGTFSSAVPLEASPDVEMTSEYLESANVSVISEMIGVMTATRQYEMQVKMMKAADQLIAAGNKLIS
ARG
>Mature_243_residues
MNPILFTAATSASKLMISQHVRANNMAQVNTIGFKAVLERTVPVFRTGDGFLSSVTSRSNSTSIDFSHGKLSQTGRPLDV
AITGDGFFAVRGNDGKESYTRAGNIKASADGELSVNNNALLGTGGEQLVLPEHQSLTISNKGIITVMSNGGGASIEVGQI
KLVNPDTNKLTLNTSGTFSSAVPLEASPDVEMTSEYLESANVSVISEMIGVMTATRQYEMQVKMMKAADQLIAAGNKLIS
ARG

Specific function: Unknown

COG id: COG4787

COG function: function code N; Flagellar basal body rod protein

Gene ontology:

Cell location: Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flagella basal body rod proteins family [H]

Homologues:

Organism=Escherichia coli, GI1787317, Length=252, Percent_Identity=31.3492063492063, Blast_Score=122, Evalue=2e-29,
Organism=Escherichia coli, GI1787318, Length=264, Percent_Identity=30.6818181818182, Blast_Score=89, Evalue=3e-19,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010930
- InterPro:   IPR001444
- InterPro:   IPR019776
- InterPro:   IPR020013
- InterPro:   IPR012836 [H]

Pfam domain/function: PF06429 DUF1078; PF00460 Flg_bb_rod [H]

EC number: NA

Molecular weight: Translated: 25562; Mature: 25562

Theoretical pI: Translated: 6.81; Mature: 6.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPILFTAATSASKLMISQHVRANNMAQVNTIGFKAVLERTVPVFRTGDGFLSSVTSRSN
CCCEEEEECCCCHHHHHHHCCCCCCCEEEEHHHHHHHHHHCCCEEECCCHHHHHHHCCCC
STSIDFSHGKLSQTGRPLDVAITGDGFFAVRGNDGKESYTRAGNIKASADGELSVNNNAL
CCEEEECCCCCCCCCCCEEEEEECCEEEEEECCCCCHHHHHCCCEEECCCCEEEECCCEE
LGTGGEQLVLPEHQSLTISNKGIITVMSNGGGASIEVGQIKLVNPDTNKLTLNTSGTFSS
EECCCCEEEECCCCEEEEECCCEEEEEECCCCCEEEEEEEEEECCCCCEEEEECCCCCCC
AVPLEASPDVEMTSEYLESANVSVISEMIGVMTATRQYEMQVKMMKAADQLIAAGNKLIS
CCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCEEEE
ARG
CCC
>Mature Secondary Structure
MNPILFTAATSASKLMISQHVRANNMAQVNTIGFKAVLERTVPVFRTGDGFLSSVTSRSN
CCCEEEEECCCCHHHHHHHCCCCCCCEEEEHHHHHHHHHHCCCEEECCCHHHHHHHCCCC
STSIDFSHGKLSQTGRPLDVAITGDGFFAVRGNDGKESYTRAGNIKASADGELSVNNNAL
CCEEEECCCCCCCCCCCEEEEEECCEEEEEECCCCCHHHHHCCCEEECCCCEEEECCCEE
LGTGGEQLVLPEHQSLTISNKGIITVMSNGGGASIEVGQIKLVNPDTNKLTLNTSGTFSS
EECCCCEEEECCCCEEEEECCCEEEEEECCCCCEEEEEEEEEECCCCCEEEEECCCCCCC
AVPLEASPDVEMTSEYLESANVSVISEMIGVMTATRQYEMQVKMMKAADQLIAAGNKLIS
CCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCEEEE
ARG
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2129540; 11677609; 2193164; 2181149 [H]