| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is fruA [H]
Identifier: 119947155
GI number: 119947155
Start: 4370726
End: 4372453
Strand: Direct
Name: fruA [H]
Synonym: Ping_3553
Alternate gene names: 119947155
Gene position: 4370726-4372453 (Clockwise)
Preceding gene: 119947154
Following gene: 119947156
Centisome position: 95.86
GC content: 44.62
Gene sequence:
>1728_bases ATGAAATTAGCGATAGTCACAGCATGCCCCAGCGGCATTGCCAACAGTATTATTGCTGCTGGTTTAATTGAAAAAGCAGT CTCAACATTAAACTGGGAAGCGACAATCGAATGCCAGTCTAGCGTCAAATCGGTACAAATTTTAACACAACAACAAATTG ATCAAGCCGACTGTATCGTGATTGCTGCGAATACAACGGTTGATCTTAGCCGCTTTCAGGGTAAAAAAGTGTATCAATCT GATATTACGGAATGCCTGGAAAATACAAAAAACTATCTGGAGAACGCAGTTAACAAAGCACAACTGCTTATCCAACCCAT AACGAGGAAGACCACTATGTCAACAACTAAAAAAATTGTTGCAATTACAGCCTGCCCAACGGGTGTTGCACACACCTTTA TGGCAGCAACTGCCTTAGAAGATAAAGCTAAAGAGCTTGGTTATGAAATTAAAGTTGAAACACGCGGCTCAGTCGGTGCA AAAAACCAGTTAACCGCAGAAGATATTAGCGCGGCTGATCTGGTTATTATTGCCGCAGATATTAGCGTTGATTTAGCCCG TTTTGATGGCAAAAAATTGTATAAAACCAGTACTGGTTTAGCCCTTAAAAAAACCGAGCAAGAGATCAACAAAGCATTTT CTGATGCAGCGATTTATCGCAGCACAGGTGCAGCGGCAAGCAGTGATGGTGAGCAAATGAAAGCATCGTCTGCTATCTAT AAACACCTTATGTCCGGTGTTTCTCATATGTTACCTGTGGTTGTTGCGGGTGGTTTATTAATTGCGTTGTCTTTTGTCTT TGGTATCGAAGCCTTTAAAGAGGAAGGTACACTTGCAGCGGCATTAATGACTATCGGCGGAGCTTCCGCTTTTGCGTTGA TGATTCCGGTATTATCTGGTTTTATTGCCTTTTCGATTGCCGACAGACCCGGTCTTGCACCCGGTTTAATTGGCGGTATG TTAGCAAGTTCAACGGGAGCGGGTTTCCTTGGTGGTATCATTGCAGGTTTCCTAGCAGGTTACACAGCAAAATGGGTTGC CGATAATTTCCCATTGCCAGATTCTATGGCGGCGCTAAAACCCATCTTAATTATTCCTTTGATTGCCAGCTTAGTAACAG GTTTAGTGATGATCTATGTGGTCGGTACGCCAGTGGCTGCAGTCATGGCCGGACTAACTGACTTCCTACAAACCATGGGC TCAGGAAATGCTGTCCTATTAGGTATTCTTCTTGGCGCAATGATGTGTTTCGACCTTGGTGGTCCAGTCAACAAAACAGC CTATACCTTTGGCGTGGGTCTATTGGCATCACAAACTTATGCACCTATGGCGGCGATTATGGCTGCGGGTATGGTACCGG CTCTAGGTATGGGTCTAGCAACATTCTTAGCTAAATCTAAATTTATCGCAAGTGAAGCCGAAGCGGGTAAAGCATCATTC GTATTAGGTCTTTGCTTTATCTCTGAAGGTGCTATCCCCTTTGCCGCACATGATCCATTACGCGTAATCCCTTGTTGTAT GGCCGGTGGCGCGTTAACAGGTGCACTGTCTATGTTATTTGGTGCACAACTACTAGCGCCACACGGTGGTTTATTCGTAC TGCTTATACCGGGTGCTATCTCACCAGTCCTACTTTACTTAGTAGCGATTGCAGCAGGAACAGCAGTGACTGGTATCAGT TACGCCTTCCTTAAGAAAAGCGACCGTAAAGAAGCCGTTGCAGCTTAA
Upstream 100 bases:
>100_bases GCATTGCAAAAAAACATAAAAATAACACAAGAGTGATTAAGAAGGTTATTTAATAACCTTAGTATTTACTTTATAAATAA ATTGTTCAGAGGATAAGAAT
Downstream 100 bases:
>100_bases TTTGACGCTTTAAATAGCGACTGGTTAGTCCATAAAAACCCGGCACATTGCTGGGTTTTTTTTCCAGAAAATATCACTAT TTTGAAGAAAAAAGAACATT
Product: PTS system fructose-specific IIBC protein
Products: NA
Alternate protein names: EIIBC-Fru; Fructose-specific phosphotransferase enzyme IIB component; EIII-Fru; PTS system fructose-specific EIIB component; Fructose permease IIC component; PTS system fructose-specific EIIC component [H]
Number of amino acids: Translated: 575; Mature: 575
Protein sequence:
>575_residues MKLAIVTACPSGIANSIIAAGLIEKAVSTLNWEATIECQSSVKSVQILTQQQIDQADCIVIAANTTVDLSRFQGKKVYQS DITECLENTKNYLENAVNKAQLLIQPITRKTTMSTTKKIVAITACPTGVAHTFMAATALEDKAKELGYEIKVETRGSVGA KNQLTAEDISAADLVIIAADISVDLARFDGKKLYKTSTGLALKKTEQEINKAFSDAAIYRSTGAAASSDGEQMKASSAIY KHLMSGVSHMLPVVVAGGLLIALSFVFGIEAFKEEGTLAAALMTIGGASAFALMIPVLSGFIAFSIADRPGLAPGLIGGM LASSTGAGFLGGIIAGFLAGYTAKWVADNFPLPDSMAALKPILIIPLIASLVTGLVMIYVVGTPVAAVMAGLTDFLQTMG SGNAVLLGILLGAMMCFDLGGPVNKTAYTFGVGLLASQTYAPMAAIMAAGMVPALGMGLATFLAKSKFIASEAEAGKASF VLGLCFISEGAIPFAAHDPLRVIPCCMAGGALTGALSMLFGAQLLAPHGGLFVLLIPGAISPVLLYLVAIAAGTAVTGIS YAFLKKSDRKEAVAA
Sequences:
>Translated_575_residues MKLAIVTACPSGIANSIIAAGLIEKAVSTLNWEATIECQSSVKSVQILTQQQIDQADCIVIAANTTVDLSRFQGKKVYQS DITECLENTKNYLENAVNKAQLLIQPITRKTTMSTTKKIVAITACPTGVAHTFMAATALEDKAKELGYEIKVETRGSVGA KNQLTAEDISAADLVIIAADISVDLARFDGKKLYKTSTGLALKKTEQEINKAFSDAAIYRSTGAAASSDGEQMKASSAIY KHLMSGVSHMLPVVVAGGLLIALSFVFGIEAFKEEGTLAAALMTIGGASAFALMIPVLSGFIAFSIADRPGLAPGLIGGM LASSTGAGFLGGIIAGFLAGYTAKWVADNFPLPDSMAALKPILIIPLIASLVTGLVMIYVVGTPVAAVMAGLTDFLQTMG SGNAVLLGILLGAMMCFDLGGPVNKTAYTFGVGLLASQTYAPMAAIMAAGMVPALGMGLATFLAKSKFIASEAEAGKASF VLGLCFISEGAIPFAAHDPLRVIPCCMAGGALTGALSMLFGAQLLAPHGGLFVLLIPGAISPVLLYLVAIAAGTAVTGIS YAFLKKSDRKEAVAA >Mature_575_residues MKLAIVTACPSGIANSIIAAGLIEKAVSTLNWEATIECQSSVKSVQILTQQQIDQADCIVIAANTTVDLSRFQGKKVYQS DITECLENTKNYLENAVNKAQLLIQPITRKTTMSTTKKIVAITACPTGVAHTFMAATALEDKAKELGYEIKVETRGSVGA KNQLTAEDISAADLVIIAADISVDLARFDGKKLYKTSTGLALKKTEQEINKAFSDAAIYRSTGAAASSDGEQMKASSAIY KHLMSGVSHMLPVVVAGGLLIALSFVFGIEAFKEEGTLAAALMTIGGASAFALMIPVLSGFIAFSIADRPGLAPGLIGGM LASSTGAGFLGGIIAGFLAGYTAKWVADNFPLPDSMAALKPILIIPLIASLVTGLVMIYVVGTPVAAVMAGLTDFLQTMG SGNAVLLGILLGAMMCFDLGGPVNKTAYTFGVGLLASQTYAPMAAIMAAGMVPALGMGLATFLAKSKFIASEAEAGKASF VLGLCFISEGAIPFAAHDPLRVIPCCMAGGALTGALSMLFGAQLLAPHGGLFVLLIPGAISPVLLYLVAIAAGTAVTGIS YAFLKKSDRKEAVAA
Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. This
COG id: COG1299
COG function: function code G; Phosphotransferase system, fructose-specific IIC component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PTS EIIC type-2 domain [H]
Homologues:
Organism=Escherichia coli, GI1788492, Length=517, Percent_Identity=63.8297872340426, Blast_Score=660, Evalue=0.0, Organism=Escherichia coli, GI87082348, Length=484, Percent_Identity=37.603305785124, Blast_Score=272, Evalue=5e-74, Organism=Escherichia coli, GI1786951, Length=433, Percent_Identity=36.9515011547344, Blast_Score=266, Evalue=3e-72, Organism=Escherichia coli, GI1790386, Length=299, Percent_Identity=43.4782608695652, Blast_Score=218, Evalue=9e-58, Organism=Escherichia coli, GI1788729, Length=397, Percent_Identity=27.2040302267003, Blast_Score=121, Evalue=9e-29, Organism=Escherichia coli, GI1790387, Length=90, Percent_Identity=52.2222222222222, Blast_Score=101, Evalue=1e-22, Organism=Escherichia coli, GI1788730, Length=90, Percent_Identity=45.5555555555556, Blast_Score=87, Evalue=2e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013011 - InterPro: IPR003501 - InterPro: IPR003352 - InterPro: IPR013014 - InterPro: IPR003353 - InterPro: IPR006327 [H]
Pfam domain/function: PF02378 PTS_EIIC; PF02302 PTS_IIB [H]
EC number: =2.7.1.69 [H]
Molecular weight: Translated: 59201; Mature: 59201
Theoretical pI: Translated: 7.33; Mature: 7.33
Prosite motif: PS51099 PTS_EIIB_TYPE_2 ; PS51104 PTS_EIIC_TYPE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLAIVTACPSGIANSIIAAGLIEKAVSTLNWEATIECQSSVKSVQILTQQQIDQADCIV CEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHCCCCCCEEE IAANTTVDLSRFQGKKVYQSDITECLENTKNYLENAVNKAQLLIQPITRKTTMSTTKKIV EEECCEEEHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEE AITACPTGVAHTFMAATALEDKAKELGYEIKVETRGSVGAKNQLTAEDISAADLVIIAAD EEEECCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHCCCCCEEEEEEC ISVDLARFDGKKLYKTSTGLALKKTEQEINKAFSDAAIYRSTGAAASSDGEQMKASSAIY CEEEHHHCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH KHLMSGVSHMLPVVVAGGLLIALSFVFGIEAFKEEGTLAAALMTIGGASAFALMIPVLSG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHH FIAFSIADRPGLAPGLIGGMLASSTGAGFLGGIIAGFLAGYTAKWVADNFPLPDSMAALK HHHEEECCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHCCCCCCCCHHHHHH PILIIPLIASLVTGLVMIYVVGTPVAAVMAGLTDFLQTMGSGNAVLLGILLGAMMCFDLG HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCC GPVNKTAYTFGVGLLASQTYAPMAAIMAAGMVPALGMGLATFLAKSKFIASEAEAGKASF CCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH VLGLCFISEGAIPFAAHDPLRVIPCCMAGGALTGALSMLFGAQLLAPHGGLFVLLIPGAI HHHHHHHCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCHH SPVLLYLVAIAAGTAVTGISYAFLKKSDRKEAVAA HHHHHHHHHHHHCHHHHHHHHHHHCCCCCHHHCCC >Mature Secondary Structure MKLAIVTACPSGIANSIIAAGLIEKAVSTLNWEATIECQSSVKSVQILTQQQIDQADCIV CEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHCCCCCCEEE IAANTTVDLSRFQGKKVYQSDITECLENTKNYLENAVNKAQLLIQPITRKTTMSTTKKIV EEECCEEEHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEE AITACPTGVAHTFMAATALEDKAKELGYEIKVETRGSVGAKNQLTAEDISAADLVIIAAD EEEECCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHCCCCCEEEEEEC ISVDLARFDGKKLYKTSTGLALKKTEQEINKAFSDAAIYRSTGAAASSDGEQMKASSAIY CEEEHHHCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH KHLMSGVSHMLPVVVAGGLLIALSFVFGIEAFKEEGTLAAALMTIGGASAFALMIPVLSG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHH FIAFSIADRPGLAPGLIGGMLASSTGAGFLGGIIAGFLAGYTAKWVADNFPLPDSMAALK HHHEEECCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHCCCCCCCCHHHHHH PILIIPLIASLVTGLVMIYVVGTPVAAVMAGLTDFLQTMGSGNAVLLGILLGAMMCFDLG HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCC GPVNKTAYTFGVGLLASQTYAPMAAIMAAGMVPALGMGLATFLAKSKFIASEAEAGKASF CCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH VLGLCFISEGAIPFAAHDPLRVIPCCMAGGALTGALSMLFGAQLLAPHGGLFVLLIPGAI HHHHHHHCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCHH SPVLLYLVAIAAGTAVTGISYAFLKKSDRKEAVAA HHHHHHHHHHHHCHHHHHHHHHHHCCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 3076173; 9278503; 9097040; 1981619 [H]