| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is 119946770
Identifier: 119946770
GI number: 119946770
Start: 3894621
End: 3896003
Strand: Direct
Name: 119946770
Synonym: Ping_3163
Alternate gene names: NA
Gene position: 3894621-3896003 (Clockwise)
Preceding gene: 119946763
Following gene: 119946771
Centisome position: 85.42
GC content: 53.0
Gene sequence:
>1383_bases ATGACTACTCAAAGCAAGGTTTCCACAGTATTGCTGGTACTCGGATTACCCGTAGCACTCGGGCTGGCACTGGCTACTCA AGGCACCGGGATTATCAAAAATGATCTCGAGCGCAATATTTATATCCCCACTGAACTGACTATGCCACTGCAGATTAAGT CCGCCTATAACGGCGAGCAGATCTTTTTCCGCTACCGCTGGCCAGCCGCTGCACCGCATATTTTGCATGATGTGCTGCGC TACGAAGATGGAAAATGGCTGACTGAAGGACACGGTGTGCCAGGACCCGCTGCCAACGGTTTGCATGAAGATCGGGTCGC TATGATGGTCGATGACGGCAGCGTGGCGGAATTCAGTCGTTATGGCGGTTATGTTGCCATTGGCGCCGGTATTGCCGGCT TCACACATGAAAACCCCAAAGGAGTCAGCAAGCACCTGCCTGAAACCCAGCAGGACGAGGTGGCGCTTGAAGATGTGACT CAGCATCAACTGCGCAAGGCGGGTTATTTTCTGGACTTGTGGCATTGGCGAGCTGGACGCTCCAACCCGATCGCCATGGC CGATGACCAGAATGTTGGCAAATCGCGTTCTGGAGATGAAGGCAAAGGCTCCTACACGAAAAATTGGAATGGTGATACCA ATCAACCTCTGCAGATGTTCAATGTCCAGACTACTGGACAGCGAGCGCTTGCGTGGGACGATGTGCGCCAGGGCAAAATC ACTCAGGAAGACAGTTACTATCTTAGTGCGCAAACCGCCGTACCTTTCGATCCGCAAGCTGATTGGAAAAATGGTGATAC TCTGCCACGGCGGATCCTGCGTCAACCCGTCGGAGATCGTGGAGACATTGCGGTGGTTGCCAAGGAGACCCGTTGGGAGG ATGGATTCTGGAACGTGACCTTAGTACGTGACATGGACACCGGTAATCCACTGAACGATAAAATTTTCCGCGAAAAGGGT CGTTATGATCTGGCTGTTTCAGTACATCGTAATGCGACTGGCGGTCGTTGGCACTATGTTTCCATGCCCTACACTGTTGG GCTTGGCCGCGACGCTGACTTCCCTGCTATGGCATTCCAGGGCGATAGCCCAGACTGGTCTCAGGAATGGTTCGATATGA CCCTGTTTTATCCTGGCCAAGTTAACTGGCCACTATTGACCAGCAAGGCACATCCCGGCGCTGAAGATATCGCCGCCGGT AAGCCGGTCCGCCCTCGCCACAGCGAAAAGGTCCTGGCAATACACGGTGTGGAAATGGAATTCAATGATAAAATTATCCA CCAATGGCAATTGACCCTGCTAGCCGGGCTGTTCGCCATGCTAGGTATTACGCTGGCGCTTCTACCCGCCTTCCGAAACA CTAAAAAAGGAGCACGCTCATGA
Upstream 100 bases:
>100_bases GACAATGTCAAGTTGAAGACCTAGCGTAGTTTAGATCGCATTCGCTGATATGCCGAAAAGGATAATGGCGTTACTCATTC CCACTCTTCAGGAATCGTCT
Downstream 100 bases:
>100_bases CAGGTCTTCACTTTATGCTGATTCATTTTCCCATCGGTTTATGGTCACTAGCGACCTTAATGATCATCGTTGGTGCGTTG TTTTCCGGGCGTTTGGCCGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 460; Mature: 459
Protein sequence:
>460_residues MTTQSKVSTVLLVLGLPVALGLALATQGTGIIKNDLERNIYIPTELTMPLQIKSAYNGEQIFFRYRWPAAAPHILHDVLR YEDGKWLTEGHGVPGPAANGLHEDRVAMMVDDGSVAEFSRYGGYVAIGAGIAGFTHENPKGVSKHLPETQQDEVALEDVT QHQLRKAGYFLDLWHWRAGRSNPIAMADDQNVGKSRSGDEGKGSYTKNWNGDTNQPLQMFNVQTTGQRALAWDDVRQGKI TQEDSYYLSAQTAVPFDPQADWKNGDTLPRRILRQPVGDRGDIAVVAKETRWEDGFWNVTLVRDMDTGNPLNDKIFREKG RYDLAVSVHRNATGGRWHYVSMPYTVGLGRDADFPAMAFQGDSPDWSQEWFDMTLFYPGQVNWPLLTSKAHPGAEDIAAG KPVRPRHSEKVLAIHGVEMEFNDKIIHQWQLTLLAGLFAMLGITLALLPAFRNTKKGARS
Sequences:
>Translated_460_residues MTTQSKVSTVLLVLGLPVALGLALATQGTGIIKNDLERNIYIPTELTMPLQIKSAYNGEQIFFRYRWPAAAPHILHDVLR YEDGKWLTEGHGVPGPAANGLHEDRVAMMVDDGSVAEFSRYGGYVAIGAGIAGFTHENPKGVSKHLPETQQDEVALEDVT QHQLRKAGYFLDLWHWRAGRSNPIAMADDQNVGKSRSGDEGKGSYTKNWNGDTNQPLQMFNVQTTGQRALAWDDVRQGKI TQEDSYYLSAQTAVPFDPQADWKNGDTLPRRILRQPVGDRGDIAVVAKETRWEDGFWNVTLVRDMDTGNPLNDKIFREKG RYDLAVSVHRNATGGRWHYVSMPYTVGLGRDADFPAMAFQGDSPDWSQEWFDMTLFYPGQVNWPLLTSKAHPGAEDIAAG KPVRPRHSEKVLAIHGVEMEFNDKIIHQWQLTLLAGLFAMLGITLALLPAFRNTKKGARS >Mature_459_residues TTQSKVSTVLLVLGLPVALGLALATQGTGIIKNDLERNIYIPTELTMPLQIKSAYNGEQIFFRYRWPAAAPHILHDVLRY EDGKWLTEGHGVPGPAANGLHEDRVAMMVDDGSVAEFSRYGGYVAIGAGIAGFTHENPKGVSKHLPETQQDEVALEDVTQ HQLRKAGYFLDLWHWRAGRSNPIAMADDQNVGKSRSGDEGKGSYTKNWNGDTNQPLQMFNVQTTGQRALAWDDVRQGKIT QEDSYYLSAQTAVPFDPQADWKNGDTLPRRILRQPVGDRGDIAVVAKETRWEDGFWNVTLVRDMDTGNPLNDKIFREKGR YDLAVSVHRNATGGRWHYVSMPYTVGLGRDADFPAMAFQGDSPDWSQEWFDMTLFYPGQVNWPLLTSKAHPGAEDIAAGK PVRPRHSEKVLAIHGVEMEFNDKIIHQWQLTLLAGLFAMLGITLALLPAFRNTKKGARS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51280; Mature: 51149
Theoretical pI: Translated: 6.64; Mature: 6.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTQSKVSTVLLVLGLPVALGLALATQGTGIIKNDLERNIYIPTELTMPLQIKSAYNGEQ CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCEECCCEEECCEEEECCCCCCE IFFRYRWPAAAPHILHDVLRYEDGKWLTEGHGVPGPAANGLHEDRVAMMVDDGSVAEFSR EEEEEECCCCCHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCEEEEECCCCHHHHHH YGGYVAIGAGIAGFTHENPKGVSKHLPETQQDEVALEDVTQHQLRKAGYFLDLWHWRAGR CCCEEEECCCEECCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCC SNPIAMADDQNVGKSRSGDEGKGSYTKNWNGDTNQPLQMFNVQTTGQRALAWDDVRQGKI CCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEHHHHCCCCC TQEDSYYLSAQTAVPFDPQADWKNGDTLPRRILRQPVGDRGDIAVVAKETRWEDGFWNVT CCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEEEECCCCCCCCEEEE LVRDMDTGNPLNDKIFREKGRYDLAVSVHRNATGGRWHYVSMPYTVGLGRDADFPAMAFQ EEEECCCCCCCCHHHHHHCCCEEEEEEEECCCCCCEEEEEECCEEEECCCCCCCCCEEEE GDSPDWSQEWFDMTLFYPGQVNWPLLTSKAHPGAEDIAAGKPVRPRHSEKVLAIHGVEME CCCCCCCHHHEEEEEEECCCCCCCEEECCCCCCHHHHCCCCCCCCCCCCCEEEEEEEEEE FNDKIIHQWQLTLLAGLFAMLGITLALLPAFRNTKKGARS CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure TTQSKVSTVLLVLGLPVALGLALATQGTGIIKNDLERNIYIPTELTMPLQIKSAYNGEQ CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCEECCCEEECCEEEECCCCCCE IFFRYRWPAAAPHILHDVLRYEDGKWLTEGHGVPGPAANGLHEDRVAMMVDDGSVAEFSR EEEEEECCCCCHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCEEEEECCCCHHHHHH YGGYVAIGAGIAGFTHENPKGVSKHLPETQQDEVALEDVTQHQLRKAGYFLDLWHWRAGR CCCEEEECCCEECCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCC SNPIAMADDQNVGKSRSGDEGKGSYTKNWNGDTNQPLQMFNVQTTGQRALAWDDVRQGKI CCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEHHHHCCCCC TQEDSYYLSAQTAVPFDPQADWKNGDTLPRRILRQPVGDRGDIAVVAKETRWEDGFWNVT CCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEEEECCCCCCCCEEEE LVRDMDTGNPLNDKIFREKGRYDLAVSVHRNATGGRWHYVSMPYTVGLGRDADFPAMAFQ EEEECCCCCCCCHHHHHHCCCEEEEEEEECCCCCCEEEEEECCEEEECCCCCCCCCEEEE GDSPDWSQEWFDMTLFYPGQVNWPLLTSKAHPGAEDIAAGKPVRPRHSEKVLAIHGVEME CCCCCCCHHHEEEEEEECCCCCCCEEECCCCCCHHHHCCCCCCCCCCCCCEEEEEEEEEE FNDKIIHQWQLTLLAGLFAMLGITLALLPAFRNTKKGARS CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA