| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is 119946684
Identifier: 119946684
GI number: 119946684
Start: 3763437
End: 3763901
Strand: Direct
Name: 119946684
Synonym: Ping_3065
Alternate gene names: NA
Gene position: 3763437-3763901 (Clockwise)
Preceding gene: 119946683
Following gene: 119946685
Centisome position: 82.54
GC content: 43.87
Gene sequence:
>465_bases ATGTCCAAAAAAAGCGCGTTAGGCTTATTCATTTGCCTGTGCCAATTTATTTCATCCAACGCCATTGCCACAGACAGCAT CATTACGGGTACCACAGACCTTTCTACATCCTGGTTATCTGGTGGCTCAATTCAGTTTAATAATTCACTTTGTGTAGGAT TAGGTGCTCCAGCGACTACCTATAAAGTGAGAATGACCGGTAGCGGCTCAGGTAATAGTTTCTCACTGCAAAAAAATGCA ACTGATACTCTTGAGTACACTATTGAATGGGCATCACAATCCGGACAAACCAGCGGTTTTTCTGCCACTAGTGGTGTTTA CATTACAGGTCAACCATCGGGGCAATCAACGGACTGCAGCGCGAAAAATGCCACTCTCATCGTTAAAATATCTGCGGCTC AGCTACAACAAGCCAAGTCAGGAAGCCATACTGGCACCATAACAATTACTGTAGAACCTGAATAA
Upstream 100 bases:
>100_bases ATTAAAATATATTCTTAGTACAGGTAATAAACAGCAACATTTTACACTCGAGACAAACAGTAAATAGGCTCTATTTATTA GTGTCTAAGGAATTATTATC
Downstream 100 bases:
>100_bases CGGCTATTGATGAGGAATGTAAAATTTGTACAGGCTAGGCATTTATTTAGTTAATCTCAGTTTAATCCTCCTTCTAATTA AACCAGTAGAAGCTGCTAAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 154; Mature: 153
Protein sequence:
>154_residues MSKKSALGLFICLCQFISSNAIATDSIITGTTDLSTSWLSGGSIQFNNSLCVGLGAPATTYKVRMTGSGSGNSFSLQKNA TDTLEYTIEWASQSGQTSGFSATSGVYITGQPSGQSTDCSAKNATLIVKISAAQLQQAKSGSHTGTITITVEPE
Sequences:
>Translated_154_residues MSKKSALGLFICLCQFISSNAIATDSIITGTTDLSTSWLSGGSIQFNNSLCVGLGAPATTYKVRMTGSGSGNSFSLQKNA TDTLEYTIEWASQSGQTSGFSATSGVYITGQPSGQSTDCSAKNATLIVKISAAQLQQAKSGSHTGTITITVEPE >Mature_153_residues SKKSALGLFICLCQFISSNAIATDSIITGTTDLSTSWLSGGSIQFNNSLCVGLGAPATTYKVRMTGSGSGNSFSLQKNAT DTLEYTIEWASQSGQTSGFSATSGVYITGQPSGQSTDCSAKNATLIVKISAAQLQQAKSGSHTGTITITVEPE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15850; Mature: 15719
Theoretical pI: Translated: 7.13; Mature: 7.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKKSALGLFICLCQFISSNAIATDSIITGTTDLSTSWLSGGSIQFNNSLCVGLGAPATT CCCCHHHHHHHHHHHHHCCCCEECCCEEECCCCCCHHHCCCCEEEECCEEEEEECCCCEE YKVRMTGSGSGNSFSLQKNATDTLEYTIEWASQSGQTSGFSATSGVYITGQPSGQSTDCS EEEEEEECCCCCEEEEECCCCCEEEEEEEECCCCCCCCCCCCCCCEEEEECCCCCCCCCC AKNATLIVKISAAQLQQAKSGSHTGTITITVEPE CCCCEEEEEEEHHHHHHHCCCCCCEEEEEEEECC >Mature Secondary Structure SKKSALGLFICLCQFISSNAIATDSIITGTTDLSTSWLSGGSIQFNNSLCVGLGAPATT CCCHHHHHHHHHHHHHCCCCEECCCEEECCCCCCHHHCCCCEEEECCEEEEEECCCCEE YKVRMTGSGSGNSFSLQKNATDTLEYTIEWASQSGQTSGFSATSGVYITGQPSGQSTDCS EEEEEEECCCCCEEEEECCCCCEEEEEEEECCCCCCCCCCCCCCCEEEEECCCCCCCCCC AKNATLIVKISAAQLQQAKSGSHTGTITITVEPE CCCCEEEEEEEHHHHHHHCCCCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA