| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is 119946680
Identifier: 119946680
GI number: 119946680
Start: 3758184
End: 3758996
Strand: Reverse
Name: 119946680
Synonym: Ping_3061
Alternate gene names: NA
Gene position: 3758996-3758184 (Counterclockwise)
Preceding gene: 119946681
Following gene: 119946679
Centisome position: 82.44
GC content: 41.08
Gene sequence:
>813_bases ATGGTCTTCCCTGGAAGGCCATTTTTTTTGCTTTTTTTTGATAAAAAAGAAAGCAAAACAGAAAAACTAATAATAGGAAG TAACGCGGTTAATATGAAAAAGTACGTTGTTAAAGCGCTTGTCGTCATCTCATTGGCAGTTTGTTCCGCAAGCAGTTTCG CTGCATTCTCGGTCACTCGGACAAGCATGGGTGTCAACCTTGAGCAACCGGTGACAAAAGAGACCACTCTGATTAATTCA GGGAATAAACCGGTGAGAGTGAGGGTCAATTTTGAAAAACCCGCATGGGCTAAAGATAAATACTATCTGGGAGAGCAGCT GGTGGCTTATCCGAGAATAGTGGTGATTCCGCCAAAGGGTAAGATACAAGTAAAAGTTGCACCAAGAATAAAAAAAGATT TACAGGATGGGGAATATGTCGCTCTGCTTATGTTTAAAGAGATGCCCCCAAGAAGCAGTGGTAATCAGGTAACCATGCTG ATGAATATCGGTATTCCCTACTACGGCAGGAAAGGAAAACTTGAAACCGGACTCGATTTTGACGCATTGCGGATCGAGAA ATCAGGCAAGGGTTATGACCTGCTGGGAACGGCTAAAAACACCGGGAATTTTTCTTACCCGCTTGATATAGAAGTTAAGT TTTACAGCAATAAGAAACTGATAAAAGAGCAAAGCTTTAAACAGGGGTTCTACCGGGAACATTCGTTCGAGCTTAAAAAG TCAACGGAAATGGATAAAAAAGCCGATTATGCGCAGGTTGTTTTTGCAAATAAGCAACTTAATTTGTCCAAGAAATTTGA CTTTGAACTCTGA
Upstream 100 bases:
>100_bases CCTGGGGAAACCTTGGGGCGCAAAGCTATAGGGCCTGTAAAATGGTAGCCAGTTGCCGAAAGCGTGTAGACGCTTTTGCC TTTTGAGCTGATTTTTATGT
Downstream 100 bases:
>100_bases AATGAATTCGAAAAGACCCTGAGATGAATAAAGCGCTGTTTATTCTTTTTCTTTTTCTGTCAACGCCTCTATCTGCAGCA AATGGACAGTTTACTATCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 270; Mature: 270
Protein sequence:
>270_residues MVFPGRPFFLLFFDKKESKTEKLIIGSNAVNMKKYVVKALVVISLAVCSASSFAAFSVTRTSMGVNLEQPVTKETTLINS GNKPVRVRVNFEKPAWAKDKYYLGEQLVAYPRIVVIPPKGKIQVKVAPRIKKDLQDGEYVALLMFKEMPPRSSGNQVTML MNIGIPYYGRKGKLETGLDFDALRIEKSGKGYDLLGTAKNTGNFSYPLDIEVKFYSNKKLIKEQSFKQGFYREHSFELKK STEMDKKADYAQVVFANKQLNLSKKFDFEL
Sequences:
>Translated_270_residues MVFPGRPFFLLFFDKKESKTEKLIIGSNAVNMKKYVVKALVVISLAVCSASSFAAFSVTRTSMGVNLEQPVTKETTLINS GNKPVRVRVNFEKPAWAKDKYYLGEQLVAYPRIVVIPPKGKIQVKVAPRIKKDLQDGEYVALLMFKEMPPRSSGNQVTML MNIGIPYYGRKGKLETGLDFDALRIEKSGKGYDLLGTAKNTGNFSYPLDIEVKFYSNKKLIKEQSFKQGFYREHSFELKK STEMDKKADYAQVVFANKQLNLSKKFDFEL >Mature_270_residues MVFPGRPFFLLFFDKKESKTEKLIIGSNAVNMKKYVVKALVVISLAVCSASSFAAFSVTRTSMGVNLEQPVTKETTLINS GNKPVRVRVNFEKPAWAKDKYYLGEQLVAYPRIVVIPPKGKIQVKVAPRIKKDLQDGEYVALLMFKEMPPRSSGNQVTML MNIGIPYYGRKGKLETGLDFDALRIEKSGKGYDLLGTAKNTGNFSYPLDIEVKFYSNKKLIKEQSFKQGFYREHSFELKK STEMDKKADYAQVVFANKQLNLSKKFDFEL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30634; Mature: 30634
Theoretical pI: Translated: 10.31; Mature: 10.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVFPGRPFFLLFFDKKESKTEKLIIGSNAVNMKKYVVKALVVISLAVCSASSFAAFSVTR CCCCCCCEEEEEEECCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEE TSMGVNLEQPVTKETTLINSGNKPVRVRVNFEKPAWAKDKYYLGEQLVAYPRIVVIPPKG HHCCCCCCCCCCCCEEEEECCCCCEEEEEEECCCCCCCCCCHHCCHHHHCCEEEEECCCC KIQVKVAPRIKKDLQDGEYVALLMFKEMPPRSSGNQVTMLMNIGIPYYGRKGKLETGLDF CEEEEECCHHHHCCCCCCEEEEEEEECCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCC DALRIEKSGKGYDLLGTAKNTGNFSYPLDIEVKFYSNKKLIKEQSFKQGFYREHSFELKK EEEEEECCCCCEEEEEECCCCCCCCCEEEEEEEEECCCCHHHHHHHHHCCCCCCCEEEHH STEMDKKADYAQVVFANKQLNLSKKFDFEL CCCCCCCCCEEEEEEECCEECCCCCCCCCC >Mature Secondary Structure MVFPGRPFFLLFFDKKESKTEKLIIGSNAVNMKKYVVKALVVISLAVCSASSFAAFSVTR CCCCCCCEEEEEEECCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEE TSMGVNLEQPVTKETTLINSGNKPVRVRVNFEKPAWAKDKYYLGEQLVAYPRIVVIPPKG HHCCCCCCCCCCCCEEEEECCCCCEEEEEEECCCCCCCCCCHHCCHHHHCCEEEEECCCC KIQVKVAPRIKKDLQDGEYVALLMFKEMPPRSSGNQVTMLMNIGIPYYGRKGKLETGLDF CEEEEECCHHHHCCCCCCEEEEEEEECCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCC DALRIEKSGKGYDLLGTAKNTGNFSYPLDIEVKFYSNKKLIKEQSFKQGFYREHSFELKK EEEEEECCCCCEEEEEECCCCCCCCCEEEEEEEEECCCCHHHHHHHHHCCCCCCCEEEHH STEMDKKADYAQVVFANKQLNLSKKFDFEL CCCCCCCCCEEEEEEECCEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA