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The map label for this gene is yggU [C]

Identifier: 119946664

GI number: 119946664

Start: 3742246

End: 3742542

Strand: Direct

Name: yggU [C]

Synonym: Ping_3043

Alternate gene names: 119946664

Gene position: 3742246-3742542 (Clockwise)

Preceding gene: 119946663

Following gene: 119946665

Centisome position: 82.07

GC content: 43.1

Gene sequence:

>297_bases
ATGGCGGTTGATAATCTCCAATATGAAGGCGAAGATCTTTTGCTTCGCCTTGTTTTACAACCAAAATCCAGCCGCGATCA
ATTTATCGGACTGCTGGGAGATGAGCTTAAAATCGCCATTACAGCGCCACCTGTAGACGGCAAGGCCAATGCGCACCTGA
TTAAATTTTTGAGCAAGCAGTTCAAAGTTGCAAAAGGTGCCATTATTATAGAAAAAGGGTTATTAAGCCGGCATAAACGG
GTCCGAGTCTGCGCACCGAAAAAAATGCCTGAATTTTTTAACAGTCTGAATGAATGA

Upstream 100 bases:

>100_bases
TGCCGCAAATGGGAGGATTAGATCTCTCTATGTTAGTCGTCTTAATTGGATTGCAGTTTTTAGAGATGCTGGTCAGTGAT
GTATTGGCTAAATTATTTTA

Downstream 100 bases:

>100_bases
AAATTCAAAGGAGTTATTATGCTTAAAATAAAACAGTATTATCAGGTCTTATTTATTGCCTCACTATTTTGCTTTAGCCA
AACGGGTATGGCTGCACAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 98; Mature: 97

Protein sequence:

>98_residues
MAVDNLQYEGEDLLLRLVLQPKSSRDQFIGLLGDELKIAITAPPVDGKANAHLIKFLSKQFKVAKGAIIIEKGLLSRHKR
VRVCAPKKMPEFFNSLNE

Sequences:

>Translated_98_residues
MAVDNLQYEGEDLLLRLVLQPKSSRDQFIGLLGDELKIAITAPPVDGKANAHLIKFLSKQFKVAKGAIIIEKGLLSRHKR
VRVCAPKKMPEFFNSLNE
>Mature_97_residues
AVDNLQYEGEDLLLRLVLQPKSSRDQFIGLLGDELKIAITAPPVDGKANAHLIKFLSKQFKVAKGAIIIEKGLLSRHKRV
RVCAPKKMPEFFNSLNE

Specific function: Unknown

COG id: COG1872

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0235 family

Homologues:

Organism=Escherichia coli, GI87082189, Length=86, Percent_Identity=56.9767441860465, Blast_Score=113, Evalue=3e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y3043_PSYIN (A1SZ30)

Other databases:

- EMBL:   CP000510
- RefSeq:   YP_944344.1
- ProteinModelPortal:   A1SZ30
- SMR:   A1SZ30
- STRING:   A1SZ30
- GeneID:   4626056
- GenomeReviews:   CP000510_GR
- KEGG:   pin:Ping_3043
- eggNOG:   COG1872
- HOGENOM:   HBG472132
- OMA:   KASRDKI
- PhylomeDB:   A1SZ30
- BioCyc:   PING357804:PING_3043-MONOMER
- HAMAP:   MF_00634
- InterPro:   IPR005228
- InterPro:   IPR003746
- Gene3D:   G3DSA:3.30.1200.10
- TIGRFAMs:   TIGR00251

Pfam domain/function: PF02594 DUF167; SSF69786 DUF167

EC number: NA

Molecular weight: Translated: 10971; Mature: 10840

Theoretical pI: Translated: 10.25; Mature: 10.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVDNLQYEGEDLLLRLVLQPKSSRDQFIGLLGDELKIAITAPPVDGKANAHLIKFLSKQ
CCCCCCCCCCHHHEEEEEECCCCCCHHEEEECCCCEEEEEECCCCCCCCCHHHHHHHHHH
FKVAKGAIIIEKGLLSRHKRVRVCAPKKMPEFFNSLNE
HHHHCCEEEEEHHHHCCCCEEEEECCCCCHHHHHHHCC
>Mature Secondary Structure 
AVDNLQYEGEDLLLRLVLQPKSSRDQFIGLLGDELKIAITAPPVDGKANAHLIKFLSKQ
CCCCCCCCCHHHEEEEEECCCCCCHHEEEECCCCEEEEEECCCCCCCCCHHHHHHHHHH
FKVAKGAIIIEKGLLSRHKRVRVCAPKKMPEFFNSLNE
HHHHCCEEEEEHHHHCCCCEEEEECCCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA