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The map label for this gene is yieP [H]

Identifier: 119946603

GI number: 119946603

Start: 3676365

End: 3677051

Strand: Direct

Name: yieP [H]

Synonym: Ping_2982

Alternate gene names: 119946603

Gene position: 3676365-3677051 (Clockwise)

Preceding gene: 119946580

Following gene: 119946607

Centisome position: 80.63

GC content: 38.57

Gene sequence:

>687_bases
ATGTCGTCTTCAAGTTTTAGCACAATCTCAGCCTCAGCACGTAATTTGCATCTACAAGTTGCTCGTACAATTGCGCAAGG
CATTTTGTCTGGTGCTTTACCTCAAGGATCCAAAATTCCGAATGAAATGACTTTATGTGACCAATTCGGTGTCAGTCGAA
CAGCTTTACGTGAAGCGATAAAGTTGCTCAGTTCAAAAGGTTTATTACGATCTAAACCGAAAATAGGCACAACTGTAACG
GATAAAACCAATTGGAATTTTATCGATCCGCAATTACTTGAATGGATGGATGGCCTTGAAAATTCAAAGGTTTTTTATCA
ACAATTTCTAGGTTTACGAAAAGCGATTGAACCCGAAGCCTGCGCATTAGCTGCAAAAAATGCTTCGGCTGAACAACGTA
TCGAACTTTCAGATACTTTTCAAAAGATGGAAGAAATTGCAAAAGATTTTGATCATGACCGTTGGGCAGAAGTAGACATG
CATTTCCATCGTTTGATTTTCTTATCAACAGGCAATGACTTCTATTTACCTTTCGGTAACGTTTTAGCAACCATCTTTAT
GAGTTTTATTCTCTATACATCAGAAGATACTGGTGTATGTATTAAAGAGCGTCGCGCAATTTATGTGGCAATTATGGCAG
GTAAAGAAGAACAAGCACGCGAAGCATCCCGATTTTCACTCCTTTAA

Upstream 100 bases:

>100_bases
GTTACCTATGCATTGTTAATGTATATAACAGTAATAAGTATTATTATTACTAACGGTGCTATTGACTCCTGTCTTATATT
TCGCATGCATAAGGGTTACA

Downstream 100 bases:

>100_bases
GAAAAACACCCTTTTCCAAATAATTTTGCGGTTTAAAACAATTTGCAGATATTTTTTAGTTGTTTAATTAGAGAAATGGC
GAGCTTAGCTCGCCTTTTTT

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 228; Mature: 227

Protein sequence:

>228_residues
MSSSSFSTISASARNLHLQVARTIAQGILSGALPQGSKIPNEMTLCDQFGVSRTALREAIKLLSSKGLLRSKPKIGTTVT
DKTNWNFIDPQLLEWMDGLENSKVFYQQFLGLRKAIEPEACALAAKNASAEQRIELSDTFQKMEEIAKDFDHDRWAEVDM
HFHRLIFLSTGNDFYLPFGNVLATIFMSFILYTSEDTGVCIKERRAIYVAIMAGKEEQAREASRFSLL

Sequences:

>Translated_228_residues
MSSSSFSTISASARNLHLQVARTIAQGILSGALPQGSKIPNEMTLCDQFGVSRTALREAIKLLSSKGLLRSKPKIGTTVT
DKTNWNFIDPQLLEWMDGLENSKVFYQQFLGLRKAIEPEACALAAKNASAEQRIELSDTFQKMEEIAKDFDHDRWAEVDM
HFHRLIFLSTGNDFYLPFGNVLATIFMSFILYTSEDTGVCIKERRAIYVAIMAGKEEQAREASRFSLL
>Mature_227_residues
SSSSFSTISASARNLHLQVARTIAQGILSGALPQGSKIPNEMTLCDQFGVSRTALREAIKLLSSKGLLRSKPKIGTTVTD
KTNWNFIDPQLLEWMDGLENSKVFYQQFLGLRKAIEPEACALAAKNASAEQRIELSDTFQKMEEIAKDFDHDRWAEVDMH
FHRLIFLSTGNDFYLPFGNVLATIFMSFILYTSEDTGVCIKERRAIYVAIMAGKEEQAREASRFSLL

Specific function: Unknown

COG id: COG2186

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH gntR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI48994961, Length=214, Percent_Identity=36.4485981308411, Blast_Score=156, Evalue=1e-39,
Organism=Escherichia coli, GI48994955, Length=205, Percent_Identity=22.9268292682927, Blast_Score=75, Evalue=4e-15,
Organism=Escherichia coli, GI1786303, Length=207, Percent_Identity=30.4347826086957, Blast_Score=72, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011711
- InterPro:   IPR000524
- InterPro:   IPR011991 [H]

Pfam domain/function: PF07729 FCD; PF00392 GntR [H]

EC number: NA

Molecular weight: Translated: 25583; Mature: 25451

Theoretical pI: Translated: 6.94; Mature: 6.94

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSSSFSTISASARNLHLQVARTIAQGILSGALPQGSKIPNEMTLCDQFGVSRTALREAI
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCHHHHHHHH
KLLSSKGLLRSKPKIGTTVTDKTNWNFIDPQLLEWMDGLENSKVFYQQFLGLRKAIEPEA
HHHHCCCCCCCCCCCCCEEECCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHH
CALAAKNASAEQRIELSDTFQKMEEIAKDFDHDRWAEVDMHFHRLIFLSTGNDFYLPFGN
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHEEEEEEEEECCCCEECCHHH
VLATIFMSFILYTSEDTGVCIKERRAIYVAIMAGKEEQAREASRFSLL
HHHHHHHHHHHHCCCCCCCEEECCCEEEEEEEECCHHHHHHHHHHCCC
>Mature Secondary Structure 
SSSSFSTISASARNLHLQVARTIAQGILSGALPQGSKIPNEMTLCDQFGVSRTALREAI
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCHHHHHHHH
KLLSSKGLLRSKPKIGTTVTDKTNWNFIDPQLLEWMDGLENSKVFYQQFLGLRKAIEPEA
HHHHCCCCCCCCCCCCCEEECCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHH
CALAAKNASAEQRIELSDTFQKMEEIAKDFDHDRWAEVDMHFHRLIFLSTGNDFYLPFGN
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHEEEEEEEEECCCCEECCHHH
VLATIFMSFILYTSEDTGVCIKERRAIYVAIMAGKEEQAREASRFSLL
HHHHHHHHHHHHCCCCCCCEEECCCEEEEEEEECCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7686882; 9278503 [H]