Definition Psychromonas ingrahamii 37, complete genome.
Accession NC_008709
Length 4,559,598

Click here to switch to the map view.

The map label for this gene is 119946598

Identifier: 119946598

GI number: 119946598

Start: 3670401

End: 3671450

Strand: Reverse

Name: 119946598

Synonym: Ping_2977

Alternate gene names: NA

Gene position: 3671450-3670401 (Counterclockwise)

Preceding gene: 119946599

Following gene: 119946597

Centisome position: 80.52

GC content: 32.95

Gene sequence:

>1050_bases
ATGAGTATCCGATTAAAAAGAAAATCAAACACAGTTACTATATCTTCACTAAATGAGTGGAGAACACTTGATAAGCTTAA
CATGACACCTAGATATCAAAGGAAGAGTGTTTGGGGAACAGAGCAACAGTCATTGCTTATTGACAGTATATTAAAAAACA
TCCCAGTCCCTCCTGTGTTTTTGCGTGAAAGTATTGATAAAAAAGGTATAACTACCTTTGAGGTTATAGATGGTAAGCAA
AGGTTAACATCTATTTTTAAATTTATAGATAATCAACTTTCTACTGCTGACGATGATAATGATGCTTTACATGTTCCCGA
ATTAGCCGGCTTAAAAATCTCCGATTTGGAGGAAGATGAATTTGAAGATATTTTGAGCGATTTTTGGGGATATCCTATTC
CAGTTGAATATGTGTACACAAAAGATAACAACGCTGTTGAAAAAATATTTGACCGACTAAATAGGAGTGGTGAAAAACTT
AATGGGCAAGAGTTAAGAAATGCAAAGTTTTACGACTCAAAACTAATCAATATAGCTTACAAATTTGCACAGAGTATCCA
TTGGAAAAAAGAACTATTAATTACAAATAAAAATAGAATGGAAGATATTGAACTCATTTCTGAGTTTATATTTCTACTTA
TTGAAGGTGAAGAACTTGCTTCTTCACCTAAAGTTCTAGACGAACTCTATAAAAAATATGCTAATAGTACAGATATTAAT
TGGGACGAGATTGAATCAAAAATGCAAGACGTAAGTAACTTCTTCCAAGAGATGAAAATCGACTTTAACGAGTACAATGT
TTCTGGTGTTAGCCATTTATATGGTTTGTGGGCTTTTTCGTATCACTGTGTCTCAAACCAAATACAAGCTGCAAAAGTAA
AAGATAAGCTCCATGCTTTTTATGCTGCTTATAAGGAGTCTAACTTTAAAGAAGACAATCCTTTAACAACTTATAAATCT
AGTATGATGAATGCCACTAAAGGTAAAGGACAGCGTAAGAAACGTAAGCATGCCCTTATAGAGTACTGTTTATCGGAAAA
AATTGGATAG

Upstream 100 bases:

>100_bases
TTAACCCTTCAATGGATAAGTATTTTGAATCAGTAATTAATAGCCTTTTTATGAATTATATTCACTTTGACTCAAGTGAA
GTATTGAAGGAATTTATAAT

Downstream 100 bases:

>100_bases
AAAAGATTGGATGATGAAAAGATTGGACACCCAAATCTTTTTTAAACCAAACCAACGCGGCTACGGAAATTTCCGTACGT
TTTTCTTGATCAATCAATTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 349; Mature: 348

Protein sequence:

>349_residues
MSIRLKRKSNTVTISSLNEWRTLDKLNMTPRYQRKSVWGTEQQSLLIDSILKNIPVPPVFLRESIDKKGITTFEVIDGKQ
RLTSIFKFIDNQLSTADDDNDALHVPELAGLKISDLEEDEFEDILSDFWGYPIPVEYVYTKDNNAVEKIFDRLNRSGEKL
NGQELRNAKFYDSKLINIAYKFAQSIHWKKELLITNKNRMEDIELISEFIFLLIEGEELASSPKVLDELYKKYANSTDIN
WDEIESKMQDVSNFFQEMKIDFNEYNVSGVSHLYGLWAFSYHCVSNQIQAAKVKDKLHAFYAAYKESNFKEDNPLTTYKS
SMMNATKGKGQRKKRKHALIEYCLSEKIG

Sequences:

>Translated_349_residues
MSIRLKRKSNTVTISSLNEWRTLDKLNMTPRYQRKSVWGTEQQSLLIDSILKNIPVPPVFLRESIDKKGITTFEVIDGKQ
RLTSIFKFIDNQLSTADDDNDALHVPELAGLKISDLEEDEFEDILSDFWGYPIPVEYVYTKDNNAVEKIFDRLNRSGEKL
NGQELRNAKFYDSKLINIAYKFAQSIHWKKELLITNKNRMEDIELISEFIFLLIEGEELASSPKVLDELYKKYANSTDIN
WDEIESKMQDVSNFFQEMKIDFNEYNVSGVSHLYGLWAFSYHCVSNQIQAAKVKDKLHAFYAAYKESNFKEDNPLTTYKS
SMMNATKGKGQRKKRKHALIEYCLSEKIG
>Mature_348_residues
SIRLKRKSNTVTISSLNEWRTLDKLNMTPRYQRKSVWGTEQQSLLIDSILKNIPVPPVFLRESIDKKGITTFEVIDGKQR
LTSIFKFIDNQLSTADDDNDALHVPELAGLKISDLEEDEFEDILSDFWGYPIPVEYVYTKDNNAVEKIFDRLNRSGEKLN
GQELRNAKFYDSKLINIAYKFAQSIHWKKELLITNKNRMEDIELISEFIFLLIEGEELASSPKVLDELYKKYANSTDINW
DEIESKMQDVSNFFQEMKIDFNEYNVSGVSHLYGLWAFSYHCVSNQIQAAKVKDKLHAFYAAYKESNFKEDNPLTTYKSS
MMNATKGKGQRKKRKHALIEYCLSEKIG

Specific function: Unknown

COG id: COG1479

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40602; Mature: 40470

Theoretical pI: Translated: 6.28; Mature: 6.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIRLKRKSNTVTISSLNEWRTLDKLNMTPRYQRKSVWGTEQQSLLIDSILKNIPVPPVF
CCEEEECCCCEEEEECCHHHHHHHHCCCCCCHHHHCCCCCCHHHHHHHHHHHHCCCCCHH
LRESIDKKGITTFEVIDGKQRLTSIFKFIDNQLSTADDDNDALHVPELAGLKISDLEEDE
HHHCCCCCCCEEEEEECCHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCCCCCCCHHH
FEDILSDFWGYPIPVEYVYTKDNNAVEKIFDRLNRSGEKLNGQELRNAKFYDSKLINIAY
HHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHCCCCCCCCHHHHHCCHHHHHHHHHHHH
KFAQSIHWKKELLITNKNRMEDIELISEFIFLLIEGEELASSPKVLDELYKKYANSTDIN
HHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHCCCCCCC
WDEIESKMQDVSNFFQEMKIDFNEYNVSGVSHLYGLWAFSYHCVSNQIQAAKVKDKLHAF
HHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YAAYKESNFKEDNPLTTYKSSMMNATKGKGQRKKRKHALIEYCLSEKIG
HHHHHHCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SIRLKRKSNTVTISSLNEWRTLDKLNMTPRYQRKSVWGTEQQSLLIDSILKNIPVPPVF
CEEEECCCCEEEEECCHHHHHHHHCCCCCCHHHHCCCCCCHHHHHHHHHHHHCCCCCHH
LRESIDKKGITTFEVIDGKQRLTSIFKFIDNQLSTADDDNDALHVPELAGLKISDLEEDE
HHHCCCCCCCEEEEEECCHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCCCCCCCHHH
FEDILSDFWGYPIPVEYVYTKDNNAVEKIFDRLNRSGEKLNGQELRNAKFYDSKLINIAY
HHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHCCCCCCCCHHHHHCCHHHHHHHHHHHH
KFAQSIHWKKELLITNKNRMEDIELISEFIFLLIEGEELASSPKVLDELYKKYANSTDIN
HHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHCCCCCCC
WDEIESKMQDVSNFFQEMKIDFNEYNVSGVSHLYGLWAFSYHCVSNQIQAAKVKDKLHAF
HHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YAAYKESNFKEDNPLTTYKSSMMNATKGKGQRKKRKHALIEYCLSEKIG
HHHHHHCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA