| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is cdsA [H]
Identifier: 119946592
GI number: 119946592
Start: 3664564
End: 3665415
Strand: Reverse
Name: cdsA [H]
Synonym: Ping_2971
Alternate gene names: 119946592
Gene position: 3665415-3664564 (Counterclockwise)
Preceding gene: 119946593
Following gene: 119946591
Centisome position: 80.39
GC content: 41.43
Gene sequence:
>852_bases GTGCAACAACGAATTATAACTGCTTTAATTTTAGCTCCTCTTACCATTGCTGGTATATTCTTTCTTCCGTTAAAGTTTTT TATGCTTTTGGGTGCGGCCATTTACCTGCTATCCAGTAAAGAGTGGGCGGGCTTCGTGAGTAAAACGCCTTCCGGTTTCG TTCTATTTGTTTTCGGTTTAGTGCTTGGGGGGACATTACTATTAATACCCGTTGAACAAATCTGGAGCGCTGGTAAAGTC AACGGTTATATTATCTATGGCCTGTTAGCTGCCTCTCTTTGGTGGTGTCTCTCTCTACTGATGGTTATTAGTTACCCAAA ATCAGCAAAGCTATGGCAAAAAAGTAAATTCATTAAATCTGTTTTTGGTTTGCTAACCCTTGTACCCCTATTTTGGGCAA TGGTTGTTTTACGTTCGGTCAATATTGATGATGATTTTTATTTTGGTGCTGAGCTATTAATGTACGTTTCCTGTCTTGTT TGGGCCGCCGATATTGGCGCTTATTTTTGCGGGAAAAAATTTGGTAAACGCAAGTTGGCGCCTAAGGTGAGCCCAGGAAA AACCATAGAGGGCTTTTTGGGTGGACTGTTGAGTGCCATGTTTGTGGCGCTGCTTGGCTCAGCCTTCTTTGCTATTCCAA CGGATCAAATGACCATTTTTTTGATTGGCTCTTTGATCACTATTATAGTTTCCTCGCTCGGTGACTTAAGTGAAAGTCTA TTTAAACGAGAAGCCGGTCTAAAGGACAGCAGCAATTTATTACCGGGCCATGGTGGCATTTTAGACAGGATAGATAGTTT AACCGCTGCTGTGCCGGTTTTTACCCTTATTTATCTATTTTGGTTAAGTTAG
Upstream 100 bases:
>100_bases TCAAGTAAAGAACGCCGCTTTGGAAAAACCGGTGCACAACTAAGTTAATAATTAATTTGCTGGTTTTCTCAGTACAAACG TATTTAATCAAGGTGTTTCT
Downstream 100 bases:
>100_bases AAAATGAAAAAATTAGCTATATTAGGCGCAACGGGTTCGATAGGAGATAGTACACTCAGTGTTTGCCGGAGTAACCCTGA GTTATATCAGATTACCTTAT
Product: phosphatidate cytidylyltransferase
Products: NA
Alternate protein names: CDP-DAG synthase; CDP-DG synthase; CDP-diacylglycerol synthase; CDS; CDP-diglyceride pyrophosphorylase; CDP-diglyceride synthase; CTP:phosphatidate cytidylyltransferase [H]
Number of amino acids: Translated: 283; Mature: 283
Protein sequence:
>283_residues MQQRIITALILAPLTIAGIFFLPLKFFMLLGAAIYLLSSKEWAGFVSKTPSGFVLFVFGLVLGGTLLLIPVEQIWSAGKV NGYIIYGLLAASLWWCLSLLMVISYPKSAKLWQKSKFIKSVFGLLTLVPLFWAMVVLRSVNIDDDFYFGAELLMYVSCLV WAADIGAYFCGKKFGKRKLAPKVSPGKTIEGFLGGLLSAMFVALLGSAFFAIPTDQMTIFLIGSLITIIVSSLGDLSESL FKREAGLKDSSNLLPGHGGILDRIDSLTAAVPVFTLIYLFWLS
Sequences:
>Translated_283_residues MQQRIITALILAPLTIAGIFFLPLKFFMLLGAAIYLLSSKEWAGFVSKTPSGFVLFVFGLVLGGTLLLIPVEQIWSAGKV NGYIIYGLLAASLWWCLSLLMVISYPKSAKLWQKSKFIKSVFGLLTLVPLFWAMVVLRSVNIDDDFYFGAELLMYVSCLV WAADIGAYFCGKKFGKRKLAPKVSPGKTIEGFLGGLLSAMFVALLGSAFFAIPTDQMTIFLIGSLITIIVSSLGDLSESL FKREAGLKDSSNLLPGHGGILDRIDSLTAAVPVFTLIYLFWLS >Mature_283_residues MQQRIITALILAPLTIAGIFFLPLKFFMLLGAAIYLLSSKEWAGFVSKTPSGFVLFVFGLVLGGTLLLIPVEQIWSAGKV NGYIIYGLLAASLWWCLSLLMVISYPKSAKLWQKSKFIKSVFGLLTLVPLFWAMVVLRSVNIDDDFYFGAELLMYVSCLV WAADIGAYFCGKKFGKRKLAPKVSPGKTIEGFLGGLLSAMFVALLGSAFFAIPTDQMTIFLIGSLITIIVSSLGDLSESL FKREAGLKDSSNLLPGHGGILDRIDSLTAAVPVFTLIYLFWLS
Specific function: Phospholipid biosynthesis. [C]
COG id: COG0575
COG function: function code I; CDP-diglyceride synthetase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CDS family [H]
Homologues:
Organism=Escherichia coli, GI87081696, Length=283, Percent_Identity=45.583038869258, Blast_Score=220, Evalue=7e-59, Organism=Escherichia coli, GI1787677, Length=113, Percent_Identity=47.787610619469, Blast_Score=101, Evalue=7e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000374 [H]
Pfam domain/function: PF01148 CTP_transf_1 [H]
EC number: =2.7.7.41 [H]
Molecular weight: Translated: 30937; Mature: 30937
Theoretical pI: Translated: 9.66; Mature: 9.66
Prosite motif: PS01315 CDS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQQRIITALILAPLTIAGIFFLPLKFFMLLGAAIYLLSSKEWAGFVSKTPSGFVLFVFGL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHH VLGGTLLLIPVEQIWSAGKVNGYIIYGLLAASLWWCLSLLMVISYPKSAKLWQKSKFIKS HHCCHHEEEEHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH VFGLLTLVPLFWAMVVLRSVNIDDDFYFGAELLMYVSCLVWAADIGAYFCGKKFGKRKLA HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC PKVSPGKTIEGFLGGLLSAMFVALLGSAFFAIPTDQMTIFLIGSLITIIVSSLGDLSESL CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH FKREAGLKDSSNLLPGHGGILDRIDSLTAAVPVFTLIYLFWLS HHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MQQRIITALILAPLTIAGIFFLPLKFFMLLGAAIYLLSSKEWAGFVSKTPSGFVLFVFGL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHH VLGGTLLLIPVEQIWSAGKVNGYIIYGLLAASLWWCLSLLMVISYPKSAKLWQKSKFIKS HHCCHHEEEEHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH VFGLLTLVPLFWAMVVLRSVNIDDDFYFGAELLMYVSCLVWAADIGAYFCGKKFGKRKLA HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC PKVSPGKTIEGFLGGLLSAMFVALLGSAFFAIPTDQMTIFLIGSLITIIVSSLGDLSESL CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH FKREAGLKDSSNLLPGHGGILDRIDSLTAAVPVFTLIYLFWLS HHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]