| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is yhiQ [C]
Identifier: 119946461
GI number: 119946461
Start: 3483862
End: 3484623
Strand: Reverse
Name: yhiQ [C]
Synonym: Ping_2836
Alternate gene names: 119946461
Gene position: 3484623-3483862 (Counterclockwise)
Preceding gene: 119946462
Following gene: 119946459
Centisome position: 76.42
GC content: 42.39
Gene sequence:
>762_bases ATGGATATTCCTTTAATTTGTAACGATTCAGCATTAAGTCAGAAAGCAAAAATATTACGTAAAAAATGGGGTTTTCTAAG TACCCAAAGTGATCATTTTCAATTGCATCTTTTACCGGAATATTTGGCGCTTGAGCAAAAAGACGATCCCAAGCAAGGAT TAGTCTTTGTGGATTTTGTCTCAGGTAGCGTTGCGCATCGGCGTAAATTTGGTGGTGGAAAAGGGCAGGCGATTGCTAAG GCGATAGGTTTAAAACCCGGCGTGCAGGTTGATGTGATTGATGCGACGGCAGGCCTCGGTCGAGATGCTTTTGTATTAGC CTCACTCGGTTGTAATGTCACTATGATCGAGCGCTCCGCCGTTGCTGCAGCATTGCTTGAAGATGGTTTAGAAAGGGCTT ATTTAAATCTGGAAATAGGTACCTGGATGAAACAGCGAATGAGACTTCATTTTGGGTCGGCAAGCGAATATTTACAACAC CACCAGACAGGTGTTGTTTATCTGGATCCTATGTTTCCTCATAAAAAGAAATCTGCATTAGTGAAAAAAGAGATGCGGGT TTTCCAAGGTGTGGTGGGGGAAGATCTGGACGCCGATAGTTTGCTTGAAGCGGCATTAAACGCTGCGCGTTATCGAGTGG TTGTTAAACGACCTGACTATGCGCCTTTTTTAAATGATAAAAAGCCAACAATGAGTATTAAAACCAAGAAAAACCGCTTT GATGTTTATGTCAAACAGGCGATGCCGCAAAATAAAAGCTAA
Upstream 100 bases:
>100_bases TTTTTGAAAATTCTGATAGTAATTCCTCTGATGAGTGGGCTTGCTATCAATAATAGTATTTGCTATAAAATCCAACATTA TTGTCAGTAGGTGAAATGGA
Downstream 100 bases:
>100_bases ACCGGGTATTATCCCCCGGTTTATATTAAGCATTAGGCCGCTAAAAACTAACTCATAAATTTAAAATTGCATTATGCCGG TTTACCGATAGGTAAAATAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 253; Mature: 253
Protein sequence:
>253_residues MDIPLICNDSALSQKAKILRKKWGFLSTQSDHFQLHLLPEYLALEQKDDPKQGLVFVDFVSGSVAHRRKFGGGKGQAIAK AIGLKPGVQVDVIDATAGLGRDAFVLASLGCNVTMIERSAVAAALLEDGLERAYLNLEIGTWMKQRMRLHFGSASEYLQH HQTGVVYLDPMFPHKKKSALVKKEMRVFQGVVGEDLDADSLLEAALNAARYRVVVKRPDYAPFLNDKKPTMSIKTKKNRF DVYVKQAMPQNKS
Sequences:
>Translated_253_residues MDIPLICNDSALSQKAKILRKKWGFLSTQSDHFQLHLLPEYLALEQKDDPKQGLVFVDFVSGSVAHRRKFGGGKGQAIAK AIGLKPGVQVDVIDATAGLGRDAFVLASLGCNVTMIERSAVAAALLEDGLERAYLNLEIGTWMKQRMRLHFGSASEYLQH HQTGVVYLDPMFPHKKKSALVKKEMRVFQGVVGEDLDADSLLEAALNAARYRVVVKRPDYAPFLNDKKPTMSIKTKKNRF DVYVKQAMPQNKS >Mature_253_residues MDIPLICNDSALSQKAKILRKKWGFLSTQSDHFQLHLLPEYLALEQKDDPKQGLVFVDFVSGSVAHRRKFGGGKGQAIAK AIGLKPGVQVDVIDATAGLGRDAFVLASLGCNVTMIERSAVAAALLEDGLERAYLNLEIGTWMKQRMRLHFGSASEYLQH HQTGVVYLDPMFPHKKKSALVKKEMRVFQGVVGEDLDADSLLEAALNAARYRVVVKRPDYAPFLNDKKPTMSIKTKKNRF DVYVKQAMPQNKS
Specific function: Unknown
COG id: COG0500
COG function: function code QR; SAM-dependent methyltransferases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0341 family
Homologues:
Organism=Escherichia coli, GI1789912, Length=239, Percent_Identity=56.0669456066946, Blast_Score=259, Evalue=1e-70,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y2836_PSYIN (A1SYH7)
Other databases:
- EMBL: CP000510 - RefSeq: YP_944141.1 - ProteinModelPortal: A1SYH7 - SMR: A1SYH7 - STRING: A1SYH7 - GeneID: 4626280 - GenomeReviews: CP000510_GR - KEGG: pin:Ping_2836 - eggNOG: COG0500 - HOGENOM: HBG563235 - OMA: HRVVVKR - PhylomeDB: A1SYH7 - BioCyc: PING357804:PING_2836-MONOMER - HAMAP: MF_01523 - InterPro: IPR007536
Pfam domain/function: PF04445 DUF548
EC number: NA
Molecular weight: Translated: 28157; Mature: 28157
Theoretical pI: Translated: 10.06; Mature: 10.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDIPLICNDSALSQKAKILRKKWGFLSTQSDHFQLHLLPEYLALEQKDDPKQGLVFVDFV CCCCEEECCHHHHHHHHHHHHHCCCCCCCCCCEEEEECHHHHHCCCCCCCCCCEEEEEEC SGSVAHRRKFGGGKGQAIAKAIGLKPGVQVDVIDATAGLGRDAFVLASLGCNVTMIERSA CCCHHHHHHCCCCCCHHHHHHHCCCCCCEEEEEECCCCCCCCCEEEEECCCCEEEEHHHH VAAALLEDGLERAYLNLEIGTWMKQRMRLHFGSASEYLQHHQTGVVYLDPMFPHKKKSAL HHHHHHHHHHHHEEEEEEHHHHHHHHHHHHCCCHHHHHHHHCCCEEEECCCCCCHHHHHH VKKEMRVFQGVVGEDLDADSLLEAALNAARYRVVVKRPDYAPFLNDKKPTMSIKTKKNRF HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCCEEEEECCCHH DVYVKQAMPQNKS EEEEECCCCCCCC >Mature Secondary Structure MDIPLICNDSALSQKAKILRKKWGFLSTQSDHFQLHLLPEYLALEQKDDPKQGLVFVDFV CCCCEEECCHHHHHHHHHHHHHCCCCCCCCCCEEEEECHHHHHCCCCCCCCCCEEEEEEC SGSVAHRRKFGGGKGQAIAKAIGLKPGVQVDVIDATAGLGRDAFVLASLGCNVTMIERSA CCCHHHHHHCCCCCCHHHHHHHCCCCCCEEEEEECCCCCCCCCEEEEECCCCEEEEHHHH VAAALLEDGLERAYLNLEIGTWMKQRMRLHFGSASEYLQHHQTGVVYLDPMFPHKKKSAL HHHHHHHHHHHHEEEEEEHHHHHHHHHHHHCCCHHHHHHHHCCCEEEECCCCCCHHHHHH VKKEMRVFQGVVGEDLDADSLLEAALNAARYRVVVKRPDYAPFLNDKKPTMSIKTKKNRF HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCCEEEEECCCHH DVYVKQAMPQNKS EEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA