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The map label for this gene is aapJ [H]

Identifier: 119946443

GI number: 119946443

Start: 3465823

End: 3466836

Strand: Direct

Name: aapJ [H]

Synonym: Ping_2818

Alternate gene names: 119946443

Gene position: 3465823-3466836 (Clockwise)

Preceding gene: 119946442

Following gene: 119946444

Centisome position: 76.01

GC content: 40.34

Gene sequence:

>1014_bases
ATGAAAATTACAAAAATAGCTTTATTACTGGGTGCCGCCGCACTTGTACCCAATCTTGCTTCTGCCTCGACCTTAGAAGA
AGTCGTTAAAAAAGGCGATATAAGTTGTGGTATATCAACCGGTATTGCTGGTTTCTCGTCAACGGACTCAAAAGGTGTTT
GGGAAGGGCTCGATGTTGATTTTTGTAAATCAGTTGCTGCAGCCGTTTTTGGTGATGCATCAAAAGTAAAATATATTCCG
TTAACAGCAAAAGAGCGTTTTACCGCATTACAAAGTGGTGAAATTGATGTTTTATCACGTGCGACCACCTGGACGGCAAC
GCGAGATACCTCGTTAGGTTTAAACTTTGCAGGCGTAAACTACTACGACGGACAGGGATTCTTAGTCAACAAAAAAATAG
GTGTTACTTCAGCAAAAGAACTCAGTGGCGCAACTTTTTGTATTCAGGCAGGCACCACTTCTGAGCTTAATTTAACCGAT
TATTTCCAGGCAAATAACATGGAATATCGCGCGGTTACTTACGATACTTCAGGACAAACTATCAATGGTTTTAAAAGCGG
TCGTTGTGATGTTATTACATCCGATGCATCACAATTATATGGTTTAAAACTTAAATTAGACGATCCAGATTCTGCGATTG
TATTACCAGAGATTATTTCTAAAGAGCCGCTAGGTCCTGTGGTACGTCAAGGTGATGATGAATGGTTTAATATCGTTCGT
TGGACTATGTTTGCGACATTAGAAGCGGAAGAGTTAGGTGTTTCTTCAGCGAATGTTGATGCTATGCTCAAATCAGAAAA
TCCAAGTATTATGCGTTTATTAGGTAAATCAGGTACTGCCGGTGAAAACCTCGGTCTTAAAGGTGATTGGGTTTACCAAA
TTGTTAAGCAAGTAGGCAACTACGGCGAAATGTTTGATAAAAACGTCGGTAAAGACTCGCCTCTTAATATTGATCGCGGC
CTTAATAAGTTATGGAATCAAGGCGGCTTAATGTACTCAATGCCAATCCGCTAA

Upstream 100 bases:

>100_bases
ATTGTATTCATCGTATTAAGTAAAGCAGCCAGTTAGATTAGCTGATTTATATACCTATTTTTTTTGACATGTATTACAAA
AACATACACAAGGATATTTT

Downstream 100 bases:

>100_bases
ATACTATTTAGGGGGGCTTTATGCCCCCTTTTTCAAAGGCTTGTCTTGTTATGAATAAATCACAACTCCCCCCTGCTACC
ACCGGCGGCTTATTAAGTAG

Product: ABC amino acid transporter extracellular solute-binding protein, family 3

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 337; Mature: 337

Protein sequence:

>337_residues
MKITKIALLLGAAALVPNLASASTLEEVVKKGDISCGISTGIAGFSSTDSKGVWEGLDVDFCKSVAAAVFGDASKVKYIP
LTAKERFTALQSGEIDVLSRATTWTATRDTSLGLNFAGVNYYDGQGFLVNKKIGVTSAKELSGATFCIQAGTTSELNLTD
YFQANNMEYRAVTYDTSGQTINGFKSGRCDVITSDASQLYGLKLKLDDPDSAIVLPEIISKEPLGPVVRQGDDEWFNIVR
WTMFATLEAEELGVSSANVDAMLKSENPSIMRLLGKSGTAGENLGLKGDWVYQIVKQVGNYGEMFDKNVGKDSPLNIDRG
LNKLWNQGGLMYSMPIR

Sequences:

>Translated_337_residues
MKITKIALLLGAAALVPNLASASTLEEVVKKGDISCGISTGIAGFSSTDSKGVWEGLDVDFCKSVAAAVFGDASKVKYIP
LTAKERFTALQSGEIDVLSRATTWTATRDTSLGLNFAGVNYYDGQGFLVNKKIGVTSAKELSGATFCIQAGTTSELNLTD
YFQANNMEYRAVTYDTSGQTINGFKSGRCDVITSDASQLYGLKLKLDDPDSAIVLPEIISKEPLGPVVRQGDDEWFNIVR
WTMFATLEAEELGVSSANVDAMLKSENPSIMRLLGKSGTAGENLGLKGDWVYQIVKQVGNYGEMFDKNVGKDSPLNIDRG
LNKLWNQGGLMYSMPIR
>Mature_337_residues
MKITKIALLLGAAALVPNLASASTLEEVVKKGDISCGISTGIAGFSSTDSKGVWEGLDVDFCKSVAAAVFGDASKVKYIP
LTAKERFTALQSGEIDVLSRATTWTATRDTSLGLNFAGVNYYDGQGFLVNKKIGVTSAKELSGATFCIQAGTTSELNLTD
YFQANNMEYRAVTYDTSGQTINGFKSGRCDVITSDASQLYGLKLKLDDPDSAIVLPEIISKEPLGPVVRQGDDEWFNIVR
WTMFATLEAEELGVSSANVDAMLKSENPSIMRLLGKSGTAGENLGLKGDWVYQIVKQVGNYGEMFDKNVGKDSPLNIDRG
LNKLWNQGGLMYSMPIR

Specific function: Part of a binding-protein-dependent transport system for L-amino acids, affects the uptake as well as efflux of these amino acids [H]

COG id: COG0834

COG function: function code ET; ABC-type amino acid transport/signal transduction systems, periplasmic component/domain

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 3 family [H]

Homologues:

Organism=Escherichia coli, GI1786876, Length=217, Percent_Identity=25.8064516129032, Blast_Score=70, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005768
- InterPro:   IPR001638
- InterPro:   IPR018313 [H]

Pfam domain/function: PF00497 SBP_bac_3 [H]

EC number: NA

Molecular weight: Translated: 36285; Mature: 36285

Theoretical pI: Translated: 4.74; Mature: 4.74

Prosite motif: PS01039 SBP_BACTERIAL_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKITKIALLLGAAALVPNLASASTLEEVVKKGDISCGISTGIAGFSSTDSKGVWEGLDVD
CCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCCCCCCCHH
FCKSVAAAVFGDASKVKYIPLTAKERFTALQSGEIDVLSRATTWTATRDTSLGLNFAGVN
HHHHHHHHHHCCCCCEEEEEECHHHHHHHHCCCCEEEEECCEEEEEECCCCCCEEECCCE
YYDGQGFLVNKKIGVTSAKELSGATFCIQAGTTSELNLTDYFQANNMEYRAVTYDTSGQT
EECCCCEEEECCCCCCCHHHCCCEEEEEECCCCCCCCCCEEEECCCEEEEEEEECCCCCE
INGFKSGRCDVITSDASQLYGLKLKLDDPDSAIVLPEIISKEPLGPVVRQGDDEWFNIVR
ECCCCCCCCEEEECCCHHEEEEEEEECCCCCEEEEHHHHCCCCCCHHHHCCCHHHHHHHH
WTMFATLEAEELGVSSANVDAMLKSENPSIMRLLGKSGTAGENLGLKGDWVYQIVKQVGN
HHHHEEEEHHHHCCCCCCCEEEEECCCCHHHEEECCCCCCCCCCCCCCHHHHHHHHHHCC
YGEMFDKNVGKDSPLNIDRGLNKLWNQGGLMYSMPIR
HHHHHHHCCCCCCCCCHHHHHHHHHHCCCEEEECCCC
>Mature Secondary Structure
MKITKIALLLGAAALVPNLASASTLEEVVKKGDISCGISTGIAGFSSTDSKGVWEGLDVD
CCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCCCCCCCHH
FCKSVAAAVFGDASKVKYIPLTAKERFTALQSGEIDVLSRATTWTATRDTSLGLNFAGVN
HHHHHHHHHHCCCCCEEEEEECHHHHHHHHCCCCEEEEECCEEEEEECCCCCCEEECCCE
YYDGQGFLVNKKIGVTSAKELSGATFCIQAGTTSELNLTDYFQANNMEYRAVTYDTSGQT
EECCCCEEEECCCCCCCHHHCCCEEEEEECCCCCCCCCCEEEECCCEEEEEEEECCCCCE
INGFKSGRCDVITSDASQLYGLKLKLDDPDSAIVLPEIISKEPLGPVVRQGDDEWFNIVR
ECCCCCCCCEEEECCCHHEEEEEEEECCCCCEEEEHHHHCCCCCCHHHHCCCHHHHHHHH
WTMFATLEAEELGVSSANVDAMLKSENPSIMRLLGKSGTAGENLGLKGDWVYQIVKQVGN
HHHHEEEEHHHHCCCCCCCEEEEECCCCHHHEEECCCCCCCCCCCCCCHHHHHHHHHHCC
YGEMFDKNVGKDSPLNIDRGLNKLWNQGGLMYSMPIR
HHHHHHHCCCCCCCCCHHHHHHHHHHCCCEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8898392 [H]