| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is yiiP [C]
Identifier: 119946362
GI number: 119946362
Start: 3354702
End: 3355613
Strand: Direct
Name: yiiP [C]
Synonym: Ping_2733
Alternate gene names: 119946362
Gene position: 3354702-3355613 (Clockwise)
Preceding gene: 119946360
Following gene: 119946365
Centisome position: 73.57
GC content: 42.76
Gene sequence:
>912_bases ATGTCAACCAATGCTTCTACCAAAGTTATTATCGCAGCTTTAATAGGCAACGCAGCTATTGCGATCACCAAGTTTTTTGC CGCTTTTATGACCGGCAGTTCAGCTATGCTCTCTGAAGGCATACATTCACTGGTTGATACCGGAAATCAGATATTATTGC TCTATGGGATGAAACAGGCAAAAAAACCGGCTGATGATGAATTTCCCTTTGGACATGGTAAAGAAATCTATTTCTGGAGT TTTATTGTGGCGATACTGATCTTTGCTGTGGGTTCCGGTGTGTCTATCTATGAGGGCATTCGTCATGTGATCCACCCGGC TGAGATAAAAAACCCCATGGTCAACTATATCGTATTGTGCCTTGCGCTTCTGTTTGAAGGCGCTGCATGGTTTTTTGCCT TTAAAGAGTTTGGCAAAGTTAAGGGAAAACACGGTTATATCGAAGCGGTCCAGAAAGGTAAAGATCCTTCTATGTTTGTT GTGCTGTTTGAAGATTCCGCCGCTTTGTTAGGTTTGTTGATAGCTTTGCTGGGTATCTGGTTAACTCAGGTCACCGGTAT TGCTCTTTTCGATGGCATCGCTTCTATCTTAATCGGATTGATTCTTGGCGGTACGGCTATCTGGCTGGCGATTGAAACCA AGGGCTTGCTGATCGGTGAGGGAGCCAATAAAGAAGTCATCAACAGTATCAGAAAGATCGCAAATTCTTTTGAAGAAGTT GAGAAAGTGAATGAGCTTCTTACTATGCACATGGGGCCCGAATTTATACTGGTCAATATTAGTATTCGTTTTAAACGTGA GCAGTTAACCCGTGAACTCGAAGAGGTTATTCAGTCACTTGATGCTGCGATCAAGGCGGAGCATAGAATGGTACAGCGAA TATTTATCGAAGCCGAATCATTTCAGGAATAA
Upstream 100 bases:
>100_bases TCAGTCTGTCTATAAGCTGTTTTTAAGAATATATCGACAATGTGAGTTAACGGGCTTATCAACAAATGCATGGCTCAGTC AGTAAAATTCAGGAATAAAT
Downstream 100 bases:
>100_bases CGGAAAAAACAGCCATTCAATTTTCATTCTCCGAAATGCTTTAATCAGAGATTCAATTGAACGACAGTTCAGTATTATGA ATGGGCTACTTACTGATTGC
Product: cation diffusion facilitator family transporter
Products: NA
Alternate protein names: Cation Efflux Family Protein; Cation Transporter; Cation Efflux Protein; Integral Membrane Protein; Membrane Transporter; Co/Zn/Cd Cation Transporter; Cation Diffusion Facilitator Family Protein; CDF Family Transporter; Cation Efflux System Protein; Cobalt-Zinc-Cadmium Resistance Protein CzcD; Cation Transporter Permease Component; Cation-Efflux Pump; Cation Efflux Transporter; CDF Family Heavy Metal/H(+) Antiporter; Zinc/Cadmium/Cations Transporter; CDF Family Cation Efflux Protein; Cation Transporter Protein; Cation Efflux System
Number of amino acids: Translated: 303; Mature: 302
Protein sequence:
>303_residues MSTNASTKVIIAALIGNAAIAITKFFAAFMTGSSAMLSEGIHSLVDTGNQILLLYGMKQAKKPADDEFPFGHGKEIYFWS FIVAILIFAVGSGVSIYEGIRHVIHPAEIKNPMVNYIVLCLALLFEGAAWFFAFKEFGKVKGKHGYIEAVQKGKDPSMFV VLFEDSAALLGLLIALLGIWLTQVTGIALFDGIASILIGLILGGTAIWLAIETKGLLIGEGANKEVINSIRKIANSFEEV EKVNELLTMHMGPEFILVNISIRFKREQLTRELEEVIQSLDAAIKAEHRMVQRIFIEAESFQE
Sequences:
>Translated_303_residues MSTNASTKVIIAALIGNAAIAITKFFAAFMTGSSAMLSEGIHSLVDTGNQILLLYGMKQAKKPADDEFPFGHGKEIYFWS FIVAILIFAVGSGVSIYEGIRHVIHPAEIKNPMVNYIVLCLALLFEGAAWFFAFKEFGKVKGKHGYIEAVQKGKDPSMFV VLFEDSAALLGLLIALLGIWLTQVTGIALFDGIASILIGLILGGTAIWLAIETKGLLIGEGANKEVINSIRKIANSFEEV EKVNELLTMHMGPEFILVNISIRFKREQLTRELEEVIQSLDAAIKAEHRMVQRIFIEAESFQE >Mature_302_residues STNASTKVIIAALIGNAAIAITKFFAAFMTGSSAMLSEGIHSLVDTGNQILLLYGMKQAKKPADDEFPFGHGKEIYFWSF IVAILIFAVGSGVSIYEGIRHVIHPAEIKNPMVNYIVLCLALLFEGAAWFFAFKEFGKVKGKHGYIEAVQKGKDPSMFVV LFEDSAALLGLLIALLGIWLTQVTGIALFDGIASILIGLILGGTAIWLAIETKGLLIGEGANKEVINSIRKIANSFEEVE KVNELLTMHMGPEFILVNISIRFKREQLTRELEEVIQSLDAAIKAEHRMVQRIFIEAESFQE
Specific function: Unknown
COG id: COG0053
COG function: function code P; Predicted Co/Zn/Cd cation transporters
Gene ontology:
Cell location: Integral Membrane Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI57164948, Length=298, Percent_Identity=29.5302013422819, Blast_Score=139, Evalue=4e-33, Organism=Escherichia coli, GI1790349, Length=244, Percent_Identity=25.8196721311475, Blast_Score=62, Evalue=6e-11, Organism=Caenorhabditis elegans, GI115534117, Length=268, Percent_Identity=32.089552238806, Blast_Score=139, Evalue=3e-33, Organism=Drosophila melanogaster, GI24653141, Length=219, Percent_Identity=33.3333333333333, Blast_Score=120, Evalue=9e-28, Organism=Drosophila melanogaster, GI24653143, Length=219, Percent_Identity=33.3333333333333, Blast_Score=120, Evalue=1e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33267; Mature: 33135
Theoretical pI: Translated: 5.91; Mature: 5.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTNASTKVIIAALIGNAAIAITKFFAAFMTGSSAMLSEGIHSLVDTGNQILLLYGMKQA CCCCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCEEEEECCHHH KKPADDEFPFGHGKEIYFWSFIVAILIFAVGSGVSIYEGIRHVIHPAEIKNPMVNYIVLC CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHCCHHHHHHHHH LALLFEGAAWFFAFKEFGKVKGKHGYIEAVQKGKDPSMFVVLFEDSAALLGLLIALLGIW HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHH LTQVTGIALFDGIASILIGLILGGTAIWLAIETKGLLIGEGANKEVINSIRKIANSFEEV HHHHHHHHHHHHHHHHHHHHHHCCHHEEEEEEECCEEEECCCCHHHHHHHHHHHHHHHHH EKVNELLTMHMGPEFILVNISIRFKREQLTRELEEVIQSLDAAIKAEHRMVQRIFIEAES HHHHHHHHHHCCCCEEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FQE CCC >Mature Secondary Structure STNASTKVIIAALIGNAAIAITKFFAAFMTGSSAMLSEGIHSLVDTGNQILLLYGMKQA CCCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCEEEEECCHHH KKPADDEFPFGHGKEIYFWSFIVAILIFAVGSGVSIYEGIRHVIHPAEIKNPMVNYIVLC CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHCCHHHHHHHHH LALLFEGAAWFFAFKEFGKVKGKHGYIEAVQKGKDPSMFVVLFEDSAALLGLLIALLGIW HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHH LTQVTGIALFDGIASILIGLILGGTAIWLAIETKGLLIGEGANKEVINSIRKIANSFEEV HHHHHHHHHHHHHHHHHHHHHHCCHHEEEEEEECCEEEECCCCHHHHHHHHHHHHHHHHH EKVNELLTMHMGPEFILVNISIRFKREQLTRELEEVIQSLDAAIKAEHRMVQRIFIEAES HHHHHHHHHHCCCCEEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FQE CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA