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The map label for this gene is 119946348

Identifier: 119946348

GI number: 119946348

Start: 3335075

End: 3335602

Strand: Direct

Name: 119946348

Synonym: Ping_2719

Alternate gene names: NA

Gene position: 3335075-3335602 (Clockwise)

Preceding gene: 119946347

Following gene: 119946349

Centisome position: 73.14

GC content: 37.88

Gene sequence:

>528_bases
ATGGCAAAAAATAAAGTTTTAATTGCTTTAATTAACCCTAAAAGCCCGACAAATGTGGGTGCTGTGATGCGCGCGGCCGG
ATGTTATGCGGTTGATGGCGTTCTATATACCGGCAATCGTTATGCTCTCACAATGAAACTTAAGACAGATACCAAAAATA
TCAGCGCGACGATCCCTTTAAGGAACGAACCAGATTTACTTAATAATTTATCTGAAAATTATTCGAATAATGATATTAAA
GTGGTTTGTGTTGACCTGATTGAGGGAGCAACGCCCCTGCCTAATTTTATACATCCTGAAAAAGCATTATATATTTTTGG
CCCTGAAGACGGCACCATTAAACAGTCGGTAGTAAACCAGGCTGATGCGGTTGTTTATATCCCTACTATTGGCTGTCTGA
ATCTCGCAGCGACGGTTAATGTTGTACTTTATGATCGCCTGGCAAAATCGACAAAACATATTACCGATAATGAATTAATT
AAAAAAAGCAGAGACAATAATAATAGAGTGAAAGTGAAATCTATTTGA

Upstream 100 bases:

>100_bases
CCCCTTAATGAAGAATAGTCCTGCTGCTTGGGCTAAGCACTTTTTAAAGTGCTATTGGATTATGCTTTGGATGCCAGTTA
TTATTTGTACGAGAAATTAG

Downstream 100 bases:

>100_bases
TAAAAATATTGAAATTCTGGACCAGCATTTTTATATAAGCAAACAGCCCGAAGACTGTTGTAAAACAACAATCTAATTAG
TGCTAAAATATAGTCATCAA

Product: tRNA/rRNA methyltransferase (SpoU)

Products: NA

Alternate protein names: RNA Methyltransferase; 23S RRNA Methyltransferase; TrmH Family RNA Methyltransferase; Cold-Shock RNA Methyltransferase; rRNA Methylase; TRNA/RRNA MethyltransferaU; rRNA Methyltransferase; SpoU Class RRNA Methylase

Number of amino acids: Translated: 175; Mature: 174

Protein sequence:

>175_residues
MAKNKVLIALINPKSPTNVGAVMRAAGCYAVDGVLYTGNRYALTMKLKTDTKNISATIPLRNEPDLLNNLSENYSNNDIK
VVCVDLIEGATPLPNFIHPEKALYIFGPEDGTIKQSVVNQADAVVYIPTIGCLNLAATVNVVLYDRLAKSTKHITDNELI
KKSRDNNNRVKVKSI

Sequences:

>Translated_175_residues
MAKNKVLIALINPKSPTNVGAVMRAAGCYAVDGVLYTGNRYALTMKLKTDTKNISATIPLRNEPDLLNNLSENYSNNDIK
VVCVDLIEGATPLPNFIHPEKALYIFGPEDGTIKQSVVNQADAVVYIPTIGCLNLAATVNVVLYDRLAKSTKHITDNELI
KKSRDNNNRVKVKSI
>Mature_174_residues
AKNKVLIALINPKSPTNVGAVMRAAGCYAVDGVLYTGNRYALTMKLKTDTKNISATIPLRNEPDLLNNLSENYSNNDIKV
VCVDLIEGATPLPNFIHPEKALYIFGPEDGTIKQSVVNQADAVVYIPTIGCLNLAATVNVVLYDRLAKSTKHITDNELIK
KSRDNNNRVKVKSI

Specific function: Unknown

COG id: COG0219

COG function: function code J; Predicted rRNA methylase (SpoU class)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19141; Mature: 19010

Theoretical pI: Translated: 9.34; Mature: 9.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKNKVLIALINPKSPTNVGAVMRAAGCYAVDGVLYTGNRYALTMKLKTDTKNISATIPL
CCCCEEEEEEECCCCCCCHHHHHHHCCCEEECCEEEECCEEEEEEEEECCCCCEEEEEEC
RNEPDLLNNLSENYSNNDIKVVCVDLIEGATPLPNFIHPEKALYIFGPEDGTIKQSVVNQ
CCCCHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHCC
ADAVVYIPTIGCLNLAATVNVVLYDRLAKSTKHITDNELIKKSRDNNNRVKVKSI
CCCEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCEEEEEEC
>Mature Secondary Structure 
AKNKVLIALINPKSPTNVGAVMRAAGCYAVDGVLYTGNRYALTMKLKTDTKNISATIPL
CCCEEEEEEECCCCCCCHHHHHHHCCCEEECCEEEECCEEEEEEEEECCCCCEEEEEEC
RNEPDLLNNLSENYSNNDIKVVCVDLIEGATPLPNFIHPEKALYIFGPEDGTIKQSVVNQ
CCCCHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHCC
ADAVVYIPTIGCLNLAATVNVVLYDRLAKSTKHITDNELIKKSRDNNNRVKVKSI
CCCEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA