| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is 119946332
Identifier: 119946332
GI number: 119946332
Start: 3316343
End: 3316936
Strand: Direct
Name: 119946332
Synonym: Ping_2703
Alternate gene names: NA
Gene position: 3316343-3316936 (Clockwise)
Preceding gene: 119946329
Following gene: 119946333
Centisome position: 72.73
GC content: 37.21
Gene sequence:
>594_bases ATGAAAGATTTAAGCACGATACAAGCACTGATATTCGATTTAGATAACACCCTAGTAAGCTCGCAGCTTGATTTTAAGTT GTTAAGGGAGATTATAAGTTGCCCAGGCAAGGTTGATATTTTAGATTTTATTAATGAAATCAAATCAGCCTCTCTTATGA AACAGGCAGAGGATTTAATTGTTTCTCATGAGATGTCAGATGCACTGACAGCCTCGTTTTTACCTGGCTCAAAAAGTTTA TTGGCATTTATGGCCATCCAGAAATACCCTGTCGGGATAGTCACTCGAAACTGCCGGCAGGCGGCTAACACAAAATTAAA AAATAATGCAATTAGCGTGGATATTTTAATAACGCGTGAAGACTATCCGGCTAAACCCAATCCAGAAGCATTATTTGCAA TCGCGCAATTATGGGGAATAGAGTGCCAAAATATAATGTATGTGGGTGATCATTTTTATGATGTACAAGCGGCAAATAAT GCTGGAATGATTTCTTGTCTTATTACCCATAATATTGACCTGTCGTTTAAATACAGCGCCCATTTGGTTTTTAATGAATT GCATGAATTGGAAGATGCACTGAAAAAAAGCTAA
Upstream 100 bases:
>100_bases ATTAAAGCCTAAAACTCAGCCTCTTATTAAAAATAACCTGACGTTAGCACAATTAACAGCGTGCAGATTGATACTGTCTC CCTAATGAATAAGGAACCAC
Downstream 100 bases:
>100_bases TTTATAATAGAAAGTGTACGCACTTATCATTTAAAAAAAAGGGATCTATAAGCAGCGCTTCCTCCCTCAATTAAAGCTGC CATACACAGAATCCATAACA
Product: HAD family hydrolase
Products: NA
Alternate protein names: HAD Superfamily Hydrolase; Hydrolase/Phosphatase Protein; Phosphatase; Phosphoglycolate Phosphatase PGP; HAD-Superfamily Hydrolase; Had-Superfamily Hydrolase Protein; Phosphoglycolate Phosphatase; Hydrolase; Haloacid Dehalogenase Hydrolase; Haloacid Dehalogenase-Like Hydrolase; Hydrolase HAD-Family Protein
Number of amino acids: Translated: 197; Mature: 197
Protein sequence:
>197_residues MKDLSTIQALIFDLDNTLVSSQLDFKLLREIISCPGKVDILDFINEIKSASLMKQAEDLIVSHEMSDALTASFLPGSKSL LAFMAIQKYPVGIVTRNCRQAANTKLKNNAISVDILITREDYPAKPNPEALFAIAQLWGIECQNIMYVGDHFYDVQAANN AGMISCLITHNIDLSFKYSAHLVFNELHELEDALKKS
Sequences:
>Translated_197_residues MKDLSTIQALIFDLDNTLVSSQLDFKLLREIISCPGKVDILDFINEIKSASLMKQAEDLIVSHEMSDALTASFLPGSKSL LAFMAIQKYPVGIVTRNCRQAANTKLKNNAISVDILITREDYPAKPNPEALFAIAQLWGIECQNIMYVGDHFYDVQAANN AGMISCLITHNIDLSFKYSAHLVFNELHELEDALKKS >Mature_197_residues MKDLSTIQALIFDLDNTLVSSQLDFKLLREIISCPGKVDILDFINEIKSASLMKQAEDLIVSHEMSDALTASFLPGSKSL LAFMAIQKYPVGIVTRNCRQAANTKLKNNAISVDILITREDYPAKPNPEALFAIAQLWGIECQNIMYVGDHFYDVQAANN AGMISCLITHNIDLSFKYSAHLVFNELHELEDALKKS
Specific function: Unknown
COG id: COG0546
COG function: function code R; Predicted phosphatases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Saccharomyces cerevisiae, GI6324705, Length=179, Percent_Identity=29.0502793296089, Blast_Score=72, Evalue=5e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21953; Mature: 21953
Theoretical pI: Translated: 5.01; Mature: 5.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKDLSTIQALIFDLDNTLVSSQLDFKLLREIISCPGKVDILDFINEIKSASLMKQAEDLI CCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH VSHEMSDALTASFLPGSKSLLAFMAIQKYPVGIVTRNCRQAANTKLKNNAISVDILITRE HHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCEEEHHHHHHHCCCCCCCCEEEEEEEECC DYPAKPNPEALFAIAQLWGIECQNIMYVGDHFYDVQAANNAGMISCLITHNIDLSFKYSA CCCCCCCHHHHHHHHHHHCCCCCCEEEECCEEEEEEECCCCCEEEEEEEECCCEEEEEHH HLVFNELHELEDALKKS HHHHHHHHHHHHHHHCC >Mature Secondary Structure MKDLSTIQALIFDLDNTLVSSQLDFKLLREIISCPGKVDILDFINEIKSASLMKQAEDLI CCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH VSHEMSDALTASFLPGSKSLLAFMAIQKYPVGIVTRNCRQAANTKLKNNAISVDILITRE HHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCEEEHHHHHHHCCCCCCCCEEEEEEEECC DYPAKPNPEALFAIAQLWGIECQNIMYVGDHFYDVQAANNAGMISCLITHNIDLSFKYSA CCCCCCCHHHHHHHHHHHCCCCCCEEEECCEEEEEEECCCCCEEEEEEEECCCEEEEEHH HLVFNELHELEDALKKS HHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA