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The map label for this gene is 119946325

Identifier: 119946325

GI number: 119946325

Start: 3307495

End: 3308406

Strand: Reverse

Name: 119946325

Synonym: Ping_2696

Alternate gene names: NA

Gene position: 3308406-3307495 (Counterclockwise)

Preceding gene: 119946330

Following gene: 119946323

Centisome position: 72.56

GC content: 39.04

Gene sequence:

>912_bases
ATGATGACTTTTATTACAGCGCTTATCCCCATTATGATTCTTATTATTTTGGGATTTATTTTAAGGCGCATTAAATTTTT
GCCAGAAGAAACTTGGCCAGGCATAGAAAAACTGACCTATTTTGTGCTTTTACCGGCTTTGCTCATTAGAACTCTTGGAA
AACAATCTCTTATTGGCGCGCCTTGGCCATCAATGTTATTGATTGTCGTTGGAACAATAATGACATCCGCGCTATTACTT
ATTATTTTACGTAAAGCACTGTCAAAGAATAATGCGACTTTCACTTCAATTTTCCAAGGTGGTATACGCTTCAACACTTA
CATTACACTGGCTGTTGCACAAAGTTTATATGGTGCAACGGGACTCGCAATGGGCTCTGTTGCTGCTGGTTTTATGATTG
TATTGATCAATTTGTGGTGCATATCCGTTTTTGTGATTTGGGGGAAAGCTTCATTTCAAGGGGTATTACCCTTTATAAAA
CAGATTGTTGGCAATCCATTAATCATAGCTTGTGTTATTGGTTGGTTTTTAAGTATAAGCGGTATTGGATTACCCTTTGT
TGGAGATGTTCTAGAAATAGTGGGGCAAGCGGCATTACCCTTTGGACTTTTAGCCGTTGGAGCGGCGCTTCAGCTACAAG
AAATCAAAGGCCATTTTAGGGCTATTGCTTTATCGTCAATAGCGCAGTTTGGACTAAAGCCATTGATTACTATATTTTTA
GTTTCCTATACGGGACTTACTGGTGTCGCAGCAGCCGTATTGATTATTGCCTTTATGACGCCAACAGCGCCTTCTGCATA
CATACTTGCACGCCAATTAGGTGGCGATAAAGAGACAATGGCCTCTATTATTACAGTGCAAACTTTATTAGCATTTCTTA
TTATGCCTGTATTAGGAATACTGTTGCTTTAA

Upstream 100 bases:

>100_bases
ATCCATTGAATATCAAGCAAATATAAATTATTGTGGTTTTCATTTCATTTTCAAACTATTAAAACCAGCCAGTTAACTGC
AAAATTCCAGTGAGTTCAAA

Downstream 100 bases:

>100_bases
TTAGAGTCCGAATCGTCAGCCATGAGTGTGAGGAATAGGGTTGCGTCTTTCCTTTTGCTTAAAACGTAGTTAATACCTTT
TAAAAACCATCAGGATCTTT

Product: auxin efflux carrier

Products: NA

Alternate protein names: Permease; Auxin Efflux Carrier Family Protein; Transporter AEC Family; Membrane Transporter; Efflux Protein; Transporter Of Auxin Efflux Carrier Family; Transmembrane Protein; Auxin Efflux Carrier Protein; Membrane Transport Family; Permease Transmembrane Protein

Number of amino acids: Translated: 303; Mature: 303

Protein sequence:

>303_residues
MMTFITALIPIMILIILGFILRRIKFLPEETWPGIEKLTYFVLLPALLIRTLGKQSLIGAPWPSMLLIVVGTIMTSALLL
IILRKALSKNNATFTSIFQGGIRFNTYITLAVAQSLYGATGLAMGSVAAGFMIVLINLWCISVFVIWGKASFQGVLPFIK
QIVGNPLIIACVIGWFLSISGIGLPFVGDVLEIVGQAALPFGLLAVGAALQLQEIKGHFRAIALSSIAQFGLKPLITIFL
VSYTGLTGVAAAVLIIAFMTPTAPSAYILARQLGGDKETMASIITVQTLLAFLIMPVLGILLL

Sequences:

>Translated_303_residues
MMTFITALIPIMILIILGFILRRIKFLPEETWPGIEKLTYFVLLPALLIRTLGKQSLIGAPWPSMLLIVVGTIMTSALLL
IILRKALSKNNATFTSIFQGGIRFNTYITLAVAQSLYGATGLAMGSVAAGFMIVLINLWCISVFVIWGKASFQGVLPFIK
QIVGNPLIIACVIGWFLSISGIGLPFVGDVLEIVGQAALPFGLLAVGAALQLQEIKGHFRAIALSSIAQFGLKPLITIFL
VSYTGLTGVAAAVLIIAFMTPTAPSAYILARQLGGDKETMASIITVQTLLAFLIMPVLGILLL
>Mature_303_residues
MMTFITALIPIMILIILGFILRRIKFLPEETWPGIEKLTYFVLLPALLIRTLGKQSLIGAPWPSMLLIVVGTIMTSALLL
IILRKALSKNNATFTSIFQGGIRFNTYITLAVAQSLYGATGLAMGSVAAGFMIVLINLWCISVFVIWGKASFQGVLPFIK
QIVGNPLIIACVIGWFLSISGIGLPFVGDVLEIVGQAALPFGLLAVGAALQLQEIKGHFRAIALSSIAQFGLKPLITIFL
VSYTGLTGVAAAVLIIAFMTPTAPSAYILARQLGGDKETMASIITVQTLLAFLIMPVLGILLL

Specific function: Unknown

COG id: COG0679

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32433; Mature: 32433

Theoretical pI: Translated: 10.37; Mature: 10.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMTFITALIPIMILIILGFILRRIKFLPEETWPGIEKLTYFVLLPALLIRTLGKQSLIGA
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCC
PWPSMLLIVVGTIMTSALLLIILRKALSKNNATFTSIFQGGIRFNTYITLAVAQSLYGAT
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHH
GLAMGSVAAGFMIVLINLWCISVFVIWGKASFQGVLPFIKQIVGNPLIIACVIGWFLSIS
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHC
GIGLPFVGDVLEIVGQAALPFGLLAVGAALQLQEIKGHFRAIALSSIAQFGLKPLITIFL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VSYTGLTGVAAAVLIIAFMTPTAPSAYILARQLGGDKETMASIITVQTLLAFLIMPVLGI
HHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
LLL
HHC
>Mature Secondary Structure
MMTFITALIPIMILIILGFILRRIKFLPEETWPGIEKLTYFVLLPALLIRTLGKQSLIGA
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCC
PWPSMLLIVVGTIMTSALLLIILRKALSKNNATFTSIFQGGIRFNTYITLAVAQSLYGAT
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHH
GLAMGSVAAGFMIVLINLWCISVFVIWGKASFQGVLPFIKQIVGNPLIIACVIGWFLSIS
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHC
GIGLPFVGDVLEIVGQAALPFGLLAVGAALQLQEIKGHFRAIALSSIAQFGLKPLITIFL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VSYTGLTGVAAAVLIIAFMTPTAPSAYILARQLGGDKETMASIITVQTLLAFLIMPVLGI
HHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
LLL
HHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA