| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is 119946296
Identifier: 119946296
GI number: 119946296
Start: 3266028
End: 3266504
Strand: Reverse
Name: 119946296
Synonym: Ping_2663
Alternate gene names: NA
Gene position: 3266504-3266028 (Counterclockwise)
Preceding gene: 119946297
Following gene: 119946295
Centisome position: 71.64
GC content: 30.82
Gene sequence:
>477_bases ATGTTTTCCATTAAAAATAAATTTTCAACATTTTGTACTTTATCTTCACGACAAAAGTGTTGGTTTTTAATTTTACTTCT TTATAGTGGTTTACTTCGGTTTTGCCTTTTATTTCTCCCATTTCATTTATTATCTTCCATTTTAGGTAAGCAATTTTCGA ATTTACAATGCTGTAGTGTAATTAAGGACAATCAATTACACTACTTACCTGAAATAGGTCAAATCACCCGATTAGTTGAA AGGTATTCCCCATGGGAATCTAAGTGCTTAATTCAAGCTATGTTGGCCGCATCGTTATATCGTTATTATCAGATACCATA TGTTATTTATTTGGGGGTTTTAAAGCAAAATGATTCCAAAGAGCTATTAAAAGCACATGCATGGAGCCTTGTTGGTGATA AAATAATAACCGGAGCCAAAGGCCATAAAAAATTTACTATTATCAATACTTATATTTCCCCATTAATTAACCATTAA
Upstream 100 bases:
>100_bases GTTGCGCATGGCGTTAATATATTAAAAATAACTAGACGCACTATTCAATTATCATGATAATCATCTTGGTCACTAAGTTA ATCTTATTCAGAGTCTTTTT
Downstream 100 bases:
>100_bases CATGACTCAATTTTCCATCCTTTTATCCCTTTTTAAACAATATTGGTTTTTCGCGCCTAAACTACAATGCATTGCTTTAG TTTTAATGGTTGTACAAGGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 158; Mature: 158
Protein sequence:
>158_residues MFSIKNKFSTFCTLSSRQKCWFLILLLYSGLLRFCLLFLPFHLLSSILGKQFSNLQCCSVIKDNQLHYLPEIGQITRLVE RYSPWESKCLIQAMLAASLYRYYQIPYVIYLGVLKQNDSKELLKAHAWSLVGDKIITGAKGHKKFTIINTYISPLINH
Sequences:
>Translated_158_residues MFSIKNKFSTFCTLSSRQKCWFLILLLYSGLLRFCLLFLPFHLLSSILGKQFSNLQCCSVIKDNQLHYLPEIGQITRLVE RYSPWESKCLIQAMLAASLYRYYQIPYVIYLGVLKQNDSKELLKAHAWSLVGDKIITGAKGHKKFTIINTYISPLINH >Mature_158_residues MFSIKNKFSTFCTLSSRQKCWFLILLLYSGLLRFCLLFLPFHLLSSILGKQFSNLQCCSVIKDNQLHYLPEIGQITRLVE RYSPWESKCLIQAMLAASLYRYYQIPYVIYLGVLKQNDSKELLKAHAWSLVGDKIITGAKGHKKFTIINTYISPLINH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18315; Mature: 18315
Theoretical pI: Translated: 9.82; Mature: 9.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.8 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 3.8 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFSIKNKFSTFCTLSSRQKCWFLILLLYSGLLRFCLLFLPFHLLSSILGKQFSNLQCCSV CCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH IKDNQLHYLPEIGQITRLVERYSPWESKCLIQAMLAASLYRYYQIPYVIYLGVLKQNDSK HCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCHH ELLKAHAWSLVGDKIITGAKGHKKFTIINTYISPLINH HHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHCCC >Mature Secondary Structure MFSIKNKFSTFCTLSSRQKCWFLILLLYSGLLRFCLLFLPFHLLSSILGKQFSNLQCCSV CCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH IKDNQLHYLPEIGQITRLVERYSPWESKCLIQAMLAASLYRYYQIPYVIYLGVLKQNDSK HCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCHH ELLKAHAWSLVGDKIITGAKGHKKFTIINTYISPLINH HHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA