| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is 119946291
Identifier: 119946291
GI number: 119946291
Start: 3261218
End: 3262177
Strand: Reverse
Name: 119946291
Synonym: Ping_2658
Alternate gene names: NA
Gene position: 3262177-3261218 (Counterclockwise)
Preceding gene: 119946292
Following gene: 119946290
Centisome position: 71.55
GC content: 32.81
Gene sequence:
>960_bases GTGAGTTTTTTCGTTCCTTTTAAGTTTGTGCAAGCAGGCCCGTTTATTTTAGTGCATTTCATTGATGCAAATAAATTAGA TTTAAGCTATGGATTTTTTCGTGACACCATTAATGATATAAATGGTGGTCAGCCGGATAAAATTTTAGAATTAAACGCTT GGTTAGCAACGTTAAAAAGTAATACTTATCAATTAACGTCTATTGGTAGTATTTTTCATGTGTCTCGTTGTGGCTCTACT TTATTATGTCAAAATTTAAAAGCCAGCAAACAATTTTTGGTGTTAGGTGAACCTGGTTTTTTAGGCGCTATCTATAAAGA ACACAGCATTATTCCTGAGCAGCTGGGAAGTTTAGTGGCGAAAGAGTCATTAAAGTTATGGAATCATTGGGCCTGTCATC AAAGTAAACAACTTATTATCAAGTTTACTAGTGGCACTATTTTTTATTTACAAAGAATTAAGCACGATTTCCCTCAACTT AAGGTATTGTTTTTATATAGAGAGCCAAGTGCGGTAATTGAATCGCTAACACGAAAGCCAACGTCATATATTAAAAACCC GATTTGGCGTAAAAAGCTGGCAACTCTCCCTAAAGAATTAGTTGAGCATCACCACGAATACACTACTGAAGCCAGCCGTA TTTATTTATCGTCATTAGCTGTAATGCAAACACATTTTTGTCAGCAAAGCTTTTTATGCGAGTATAGCGATTTAGCTAAT AATTTTAGTGATATCATTAATTTTTTTAAACCCTCAGAGGTACAAGAAGATTTAAATAGTCAATGGCAGCAAACTTGGTC ATCAAAAAAAGGGCAATGGAAAAGTCAAAAATATATTCAAGTTAAAAGTGAAACTGTTGATGTTTTTTTGCAAAATAACT ATAAATTAATCAATTACCTATTCATAAAATATCAAGAGTTTAATAAAGCTATGTTAACCACACGCACAGAGATTGATTAA
Upstream 100 bases:
>100_bases TTTTTATCATGCGGTAACACCAACGTTGTTAGCGGATAATCAATTTTCTAATGGGCGTATGGCTGTTGCTGGCCATATTC GTTTTGAGTAGGTATTTATA
Downstream 100 bases:
>100_bases ATGAGTACGTTATTAGGTGTAATTGCTAAACATAATGATGTAACTATTCAGCCGGAATGGTTGGGCTTAATGCAACAAGC CAGTAAACCTTTTCCTTATG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 319; Mature: 318
Protein sequence:
>319_residues MSFFVPFKFVQAGPFILVHFIDANKLDLSYGFFRDTINDINGGQPDKILELNAWLATLKSNTYQLTSIGSIFHVSRCGST LLCQNLKASKQFLVLGEPGFLGAIYKEHSIIPEQLGSLVAKESLKLWNHWACHQSKQLIIKFTSGTIFYLQRIKHDFPQL KVLFLYREPSAVIESLTRKPTSYIKNPIWRKKLATLPKELVEHHHEYTTEASRIYLSSLAVMQTHFCQQSFLCEYSDLAN NFSDIINFFKPSEVQEDLNSQWQQTWSSKKGQWKSQKYIQVKSETVDVFLQNNYKLINYLFIKYQEFNKAMLTTRTEID
Sequences:
>Translated_319_residues MSFFVPFKFVQAGPFILVHFIDANKLDLSYGFFRDTINDINGGQPDKILELNAWLATLKSNTYQLTSIGSIFHVSRCGST LLCQNLKASKQFLVLGEPGFLGAIYKEHSIIPEQLGSLVAKESLKLWNHWACHQSKQLIIKFTSGTIFYLQRIKHDFPQL KVLFLYREPSAVIESLTRKPTSYIKNPIWRKKLATLPKELVEHHHEYTTEASRIYLSSLAVMQTHFCQQSFLCEYSDLAN NFSDIINFFKPSEVQEDLNSQWQQTWSSKKGQWKSQKYIQVKSETVDVFLQNNYKLINYLFIKYQEFNKAMLTTRTEID >Mature_318_residues SFFVPFKFVQAGPFILVHFIDANKLDLSYGFFRDTINDINGGQPDKILELNAWLATLKSNTYQLTSIGSIFHVSRCGSTL LCQNLKASKQFLVLGEPGFLGAIYKEHSIIPEQLGSLVAKESLKLWNHWACHQSKQLIIKFTSGTIFYLQRIKHDFPQLK VLFLYREPSAVIESLTRKPTSYIKNPIWRKKLATLPKELVEHHHEYTTEASRIYLSSLAVMQTHFCQQSFLCEYSDLANN FSDIINFFKPSEVQEDLNSQWQQTWSSKKGQWKSQKYIQVKSETVDVFLQNNYKLINYLFIKYQEFNKAMLTTRTEID
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37108; Mature: 36977
Theoretical pI: Translated: 9.19; Mature: 9.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFFVPFKFVQAGPFILVHFIDANKLDLSYGFFRDTINDINGGQPDKILELNAWLATLKS CCCCCCHHHHCCCCEEEEEEECCCCEECCHHHHHHHHHHCCCCCCCCEEEHHHHHHHHCC NTYQLTSIGSIFHVSRCGSTLLCQNLKASKQFLVLGEPGFLGAIYKEHSIIPEQLGSLVA CCEEEEECCCHHHHHHCCCHHHHHCCCCCCCEEEEECCCCEEHHHHHCCCCHHHHHHHHH KESLKLWNHWACHQSKQLIIKFTSGTIFYLQRIKHDFPQLKVLFLYREPSAVIESLTRKP HHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCCCEEEEEEEECHHHHHHHHHCCC TSYIKNPIWRKKLATLPKELVEHHHEYTTEASRIYLSSLAVMQTHFCQQSFLCEYSDLAN HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NFSDIINFFKPSEVQEDLNSQWQQTWSSKKGQWKSQKYIQVKSETVDVFLQNNYKLINYL HHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCEEEEEECCCEEEEEEE FIKYQEFNKAMLTTRTEID EEEHHHHCHHHHCCCCCCC >Mature Secondary Structure SFFVPFKFVQAGPFILVHFIDANKLDLSYGFFRDTINDINGGQPDKILELNAWLATLKS CCCCCHHHHCCCCEEEEEEECCCCEECCHHHHHHHHHHCCCCCCCCEEEHHHHHHHHCC NTYQLTSIGSIFHVSRCGSTLLCQNLKASKQFLVLGEPGFLGAIYKEHSIIPEQLGSLVA CCEEEEECCCHHHHHHCCCHHHHHCCCCCCCEEEEECCCCEEHHHHHCCCCHHHHHHHHH KESLKLWNHWACHQSKQLIIKFTSGTIFYLQRIKHDFPQLKVLFLYREPSAVIESLTRKP HHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCCCEEEEEEEECHHHHHHHHHCCC TSYIKNPIWRKKLATLPKELVEHHHEYTTEASRIYLSSLAVMQTHFCQQSFLCEYSDLAN HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NFSDIINFFKPSEVQEDLNSQWQQTWSSKKGQWKSQKYIQVKSETVDVFLQNNYKLINYL HHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCEEEEEECCCEEEEEEE FIKYQEFNKAMLTTRTEID EEEHHHHCHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA