| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is pstS1 [H]
Identifier: 119946227
GI number: 119946227
Start: 3175829
End: 3176695
Strand: Direct
Name: pstS1 [H]
Synonym: Ping_2588
Alternate gene names: 119946227
Gene position: 3175829-3176695 (Clockwise)
Preceding gene: 119946226
Following gene: 119946228
Centisome position: 69.65
GC content: 38.18
Gene sequence:
>867_bases ATGAATATTTTTACCGTTATGATTCACATGGAATTTATTATGAAAAAGGTTATTGGTTTATTGGTCGCAATAGTTTTGTC GCCCATCGCATTTGCATCTTCAGAAACAACCGTTACAATCGCAGGTTCTACTTCTGTTTCCAACGTAATGGAGGTCTTGG GCGAGACTTATCAGAAAAAAACGGGCATTGATGTAGAGGTACAAGGCATGGGGTCATCAGCAGGTATTGTTGCCGCAAGA AATGGCACTACTATGCTGGGCATGTCTTCTCGCGAACTGACCATTGACGAATTAACTGATGTGGACACAATGGTGATTGC CCATGATGGGATCGCTATCGTTATCAATAAGTCAAACCCAGTAGAAAATTTAACCAAAGAAGAGATAAAGAAAATATATC GCCAAGAAATAACTAATTGGAAAGAGGTAGGTGGCGAAGATAAACCCATTATTGCCGTTACACGTGATGTATCATCGGGG ACGCGGGAAGAATTCGAAAAAATATTGGGTCTAAAACGTAATGTCAATAATATCGAAGTATCAGATATTTCCCCGCGTAC CTTGGTTGGCAATGGTAACGGTATGGTTAAGACAATGGTTGCTAACAATATTTATGCGCTTGCTTATATTTCTTTAGGCT CTGTCGATCATGAATTATTGGTAAAAGCGCTCAGTGTAGATGGTATAAAAGCCACCAATGAAAATGTTTTTTCTGGTGAA TATAAACTTGCCAGATCCTTTATAGTACTATATAAAAAGAATGTTGCTCAACCGGCACTCGATTTTGTTAACTATATTAT GTCCGATGAAGGTCAAAAAATCATCGACGATCAAGGTTATATCAGCATTGAACAATCTCATAATTAA
Upstream 100 bases:
>100_bases CGAGTTAACTAATTTTTTAAAAATTAATCAAAGGGGAGCTTATGCTCCTCTTTTTGCTTTGAAAATTTTGTAAGAGCAAC TGGTTCTAGTGCATAATCAG
Downstream 100 bases:
>100_bases AATAAGGGAGGCGCAAGCGTGCCTTCTGTCATAATAATTAACGTTAAATAAGTAGTATTACCCTAAGGCAGTATAATGAA TATTGGAAATAAAAGTCTTC
Product: ABC phosphate transporter periplasmic phosphate-binding protein
Products: NA
Alternate protein names: PBP 1 [H]
Number of amino acids: Translated: 288; Mature: 288
Protein sequence:
>288_residues MNIFTVMIHMEFIMKKVIGLLVAIVLSPIAFASSETTVTIAGSTSVSNVMEVLGETYQKKTGIDVEVQGMGSSAGIVAAR NGTTMLGMSSRELTIDELTDVDTMVIAHDGIAIVINKSNPVENLTKEEIKKIYRQEITNWKEVGGEDKPIIAVTRDVSSG TREEFEKILGLKRNVNNIEVSDISPRTLVGNGNGMVKTMVANNIYALAYISLGSVDHELLVKALSVDGIKATNENVFSGE YKLARSFIVLYKKNVAQPALDFVNYIMSDEGQKIIDDQGYISIEQSHN
Sequences:
>Translated_288_residues MNIFTVMIHMEFIMKKVIGLLVAIVLSPIAFASSETTVTIAGSTSVSNVMEVLGETYQKKTGIDVEVQGMGSSAGIVAAR NGTTMLGMSSRELTIDELTDVDTMVIAHDGIAIVINKSNPVENLTKEEIKKIYRQEITNWKEVGGEDKPIIAVTRDVSSG TREEFEKILGLKRNVNNIEVSDISPRTLVGNGNGMVKTMVANNIYALAYISLGSVDHELLVKALSVDGIKATNENVFSGE YKLARSFIVLYKKNVAQPALDFVNYIMSDEGQKIIDDQGYISIEQSHN >Mature_288_residues MNIFTVMIHMEFIMKKVIGLLVAIVLSPIAFASSETTVTIAGSTSVSNVMEVLGETYQKKTGIDVEVQGMGSSAGIVAAR NGTTMLGMSSRELTIDELTDVDTMVIAHDGIAIVINKSNPVENLTKEEIKKIYRQEITNWKEVGGEDKPIIAVTRDVSSG TREEFEKILGLKRNVNNIEVSDISPRTLVGNGNGMVKTMVANNIYALAYISLGSVDHELLVKALSVDGIKATNENVFSGE YKLARSFIVLYKKNVAQPALDFVNYIMSDEGQKIIDDQGYISIEQSHN
Specific function: Part of the ABC transporter complex pstSACB involved in phosphate import [H]
COG id: COG0226
COG function: function code P; ABC-type phosphate transport system, periplasmic component
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pstS family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011862 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31441; Mature: 31441
Theoretical pI: Translated: 4.82; Mature: 4.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIFTVMIHMEFIMKKVIGLLVAIVLSPIAFASSETTVTIAGSTSVSNVMEVLGETYQKK CCEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHH TGIDVEVQGMGSSAGIVAARNGTTMLGMSSRELTIDELTDVDTMVIAHDGIAIVINKSNP CCCCEEEEECCCCCCEEEECCCCEEEECCCCCEEHHHHCCCEEEEEEECCEEEEEECCCC VENLTKEEIKKIYRQEITNWKEVGGEDKPIIAVTRDVSSGTREEFEKILGLKRNVNNIEV HHHHHHHHHHHHHHHHCCCHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCEEEE SDISPRTLVGNGNGMVKTMVANNIYALAYISLGSVDHELLVKALSVDGIKATNENVFSGE CCCCCCEEEECCCCEEEEEECCCEEEEEEEEECCCCHHHHHHHHCCCCCCCCCCCEECCH YKLARSFIVLYKKNVAQPALDFVNYIMSDEGQKIIDDQGYISIEQSHN HHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCEEECCCCEEEEECCCC >Mature Secondary Structure MNIFTVMIHMEFIMKKVIGLLVAIVLSPIAFASSETTVTIAGSTSVSNVMEVLGETYQKK CCEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHH TGIDVEVQGMGSSAGIVAARNGTTMLGMSSRELTIDELTDVDTMVIAHDGIAIVINKSNP CCCCEEEEECCCCCCEEEECCCCEEEECCCCCEEHHHHCCCEEEEEEECCEEEEEECCCC VENLTKEEIKKIYRQEITNWKEVGGEDKPIIAVTRDVSSGTREEFEKILGLKRNVNNIEV HHHHHHHHHHHHHHHHCCCHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCEEEE SDISPRTLVGNGNGMVKTMVANNIYALAYISLGSVDHELLVKALSVDGIKATNENVFSGE CCCCCCEEEECCCCEEEEEECCCEEEEEEEEECCCCHHHHHHHHCCCCCCCCCCCEECCH YKLARSFIVLYKKNVAQPALDFVNYIMSDEGQKIIDDQGYISIEQSHN HHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCEEECCCCEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11463916 [H]