Definition Psychromonas ingrahamii 37, complete genome.
Accession NC_008709
Length 4,559,598

Click here to switch to the map view.

The map label for this gene is 119946205

Identifier: 119946205

GI number: 119946205

Start: 3144667

End: 3145446

Strand: Direct

Name: 119946205

Synonym: Ping_2565

Alternate gene names: NA

Gene position: 3144667-3145446 (Clockwise)

Preceding gene: 119946204

Following gene: 119946206

Centisome position: 68.97

GC content: 31.41

Gene sequence:

>780_bases
TTGAACATCTTAAATTTTATCTTGAATTTATTAAAGCACCCTATAACAGCAATAGTTGTATCAATATCTCTAACAATTGT
TGTTTACAAGTTATCTATTGTTGTAAAGGAGCCTGTTTTCGCTATTAAACCTCCTATTCTGTTAGTTCAAAATCAAACGG
GTTCAAATAGGTTAAAAGTAACTTGGGATGATATTCCAGTTGAAAACGTTTATTCCGTTGAAGTAGCTATTTGGAATAAA
GGCAACGACTATATAGATTTTGAAAATGTTGTAAAATCTAGCCCTATAAAAATCATGCCTACAAATAAAGTTAATATTTT
AAACGTAAAACGTATGAAAGTTAGCGGCCCTAAATTAGAATTAAATGGAAAAATTATTGAAGACATTGGCACTAAAAAGG
CTATTTTAATAAACATCAAAAACGATGAGGTTCTAGAGCATTTAGATGGATCCGTTTTTCATATTTTATACTCAAGTAAT
CAAGAGGTAGGCTGGATGGTAAAAGGGAGAATCAAAGGAATTCCTGAAGGTTTTATAGAAGAAGATGATTACCCGACTAA
ACCCACATCACAAACTTGGTATTTATCTATAGCAGCATTTTCTCTGGAGTTTTTGCTATTTTTATTAGTCATTACTAGCC
AATTTTTCCTCCAGAAGAAAGATTTAAATCCAAGGTGGTGGTTATTTCCCTATAATGTAGTGTTAAGTGTTCTTGTTATA
TATTGGTTATTTGCGAGCGTTTTTCCATTTCTTTTCTACCCAGAATGGCTAATTATGTGA

Upstream 100 bases:

>100_bases
CTTATAAATAAATAAAATTTTAAATATATATTAGTGAGAATGCGGACTAATACACTGTTATGCGTATTTAACAGCATTAT
TCATACTTAGAGGCTCTTAA

Downstream 100 bases:

>100_bases
TGTATGTGCACCATACGGCTAACAAGTCGTTTAATGGGATTTGGCTGAAAGAGTAATTCTACAGCCTCGTTATTTATCTG
GAAGGTAGAGAGAATTGAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 259; Mature: 259

Protein sequence:

>259_residues
MNILNFILNLLKHPITAIVVSISLTIVVYKLSIVVKEPVFAIKPPILLVQNQTGSNRLKVTWDDIPVENVYSVEVAIWNK
GNDYIDFENVVKSSPIKIMPTNKVNILNVKRMKVSGPKLELNGKIIEDIGTKKAILINIKNDEVLEHLDGSVFHILYSSN
QEVGWMVKGRIKGIPEGFIEEDDYPTKPTSQTWYLSIAAFSLEFLLFLLVITSQFFLQKKDLNPRWWLFPYNVVLSVLVI
YWLFASVFPFLFYPEWLIM

Sequences:

>Translated_259_residues
MNILNFILNLLKHPITAIVVSISLTIVVYKLSIVVKEPVFAIKPPILLVQNQTGSNRLKVTWDDIPVENVYSVEVAIWNK
GNDYIDFENVVKSSPIKIMPTNKVNILNVKRMKVSGPKLELNGKIIEDIGTKKAILINIKNDEVLEHLDGSVFHILYSSN
QEVGWMVKGRIKGIPEGFIEEDDYPTKPTSQTWYLSIAAFSLEFLLFLLVITSQFFLQKKDLNPRWWLFPYNVVLSVLVI
YWLFASVFPFLFYPEWLIM
>Mature_259_residues
MNILNFILNLLKHPITAIVVSISLTIVVYKLSIVVKEPVFAIKPPILLVQNQTGSNRLKVTWDDIPVENVYSVEVAIWNK
GNDYIDFENVVKSSPIKIMPTNKVNILNVKRMKVSGPKLELNGKIIEDIGTKKAILINIKNDEVLEHLDGSVFHILYSSN
QEVGWMVKGRIKGIPEGFIEEDDYPTKPTSQTWYLSIAAFSLEFLLFLLVITSQFFLQKKDLNPRWWLFPYNVVLSVLVI
YWLFASVFPFLFYPEWLIM

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29818; Mature: 29818

Theoretical pI: Translated: 8.67; Mature: 8.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNILNFILNLLKHPITAIVVSISLTIVVYKLSIVVKEPVFAIKPPILLVQNQTGSNRLKV
CCHHHHHHHHHHCCHHHHHHHHHHHHHEEEEEEEEECCCEEECCCEEEEECCCCCCEEEE
TWDDIPVENVYSVEVAIWNKGNDYIDFENVVKSSPIKIMPTNKVNILNVKRMKVSGPKLE
EECCCCCCCEEEEEEEEEECCCCEECHHHHHCCCCEEEEECCCEEEEEEEEEEECCCEEE
LNGKIIEDIGTKKAILINIKNDEVLEHLDGSVFHILYSSNQEVGWMVKGRIKGIPEGFIE
ECCEEEECCCCCEEEEEEECCHHHHHHCCCCEEEEEEECCCCEEEEEEEEECCCCCCCCC
EDDYPTKPTSQTWYLSIAAFSLEFLLFLLVITSQFFLQKKDLNPRWWLFPYNVVLSVLVI
CCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHEECCCCCCEEEEEHHHHHHHHHHH
YWLFASVFPFLFYPEWLIM
HHHHHHHHHHHHCCHHHCC
>Mature Secondary Structure
MNILNFILNLLKHPITAIVVSISLTIVVYKLSIVVKEPVFAIKPPILLVQNQTGSNRLKV
CCHHHHHHHHHHCCHHHHHHHHHHHHHEEEEEEEEECCCEEECCCEEEEECCCCCCEEEE
TWDDIPVENVYSVEVAIWNKGNDYIDFENVVKSSPIKIMPTNKVNILNVKRMKVSGPKLE
EECCCCCCCEEEEEEEEEECCCCEECHHHHHCCCCEEEEECCCEEEEEEEEEEECCCEEE
LNGKIIEDIGTKKAILINIKNDEVLEHLDGSVFHILYSSNQEVGWMVKGRIKGIPEGFIE
ECCEEEECCCCCEEEEEEECCHHHHHHCCCCEEEEEEECCCCEEEEEEEEECCCCCCCCC
EDDYPTKPTSQTWYLSIAAFSLEFLLFLLVITSQFFLQKKDLNPRWWLFPYNVVLSVLVI
CCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHEECCCCCCEEEEEHHHHHHHHHHH
YWLFASVFPFLFYPEWLIM
HHHHHHHHHHHHCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA