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The map label for this gene is yafM [H]

Identifier: 119946170

GI number: 119946170

Start: 3093656

End: 3094195

Strand: Reverse

Name: yafM [H]

Synonym: Ping_2530

Alternate gene names: 119946170

Gene position: 3094195-3093656 (Counterclockwise)

Preceding gene: 119946177

Following gene: 119946166

Centisome position: 67.86

GC content: 43.52

Gene sequence:

>540_bases
ATGGCTAATTATCGGTGTGCAGATATCAAAGGAGGCACCTATTTTTTCACTGTGGTGACCTATCGACGGCAGCAGATATT
ATGTAATAAAAAGGTGATGCTTGCCTTGCGTAATGCCATTCGCGATGTACAAGCAATATATCCTTTTGAAATTAATGGCT
GGGTATTACTGCCTGACCATCTCCACTGTATCTGGACGCTGCCGGTGGGTGATGCGAATTTCAGTATGCGTTGGGCAATG
ATAAAACGAGCGGTCAGCAAACAATGTGGGCCAGATCTGTTACATGAGGAGTTACTCAATAAATCCAAGCGGCAACGCAG
GGAATCGACTATCTGGCAACGCCGTTTTTGGGAACATCAAATCCGTAATGAAGATGATTATGAAAAGCATCTGGACTATC
TGCATTACAACCCTGTTAAGCATAGTTATGTGAATAATGTCGTCGATTGGCCTTACTCGACATACCATCGCTATCTGCAT
CAGGGTGTTTATGATGACAGTTGGGCTGGTGATGGGATTGATAATGGATTTGGTGAATAA

Upstream 100 bases:

>100_bases
TGCACCGTTAATGACGATCAGCCCACACACTATGAGCTATGTTTATCGGTAGGGTGCATTTCATGCACCATAAATAGTTA
TTCTTGATGGAGTTTAAATA

Downstream 100 bases:

>100_bases
CGCAGGTCATCGGTGCGCATAGCGCACCCTACAGCTTATGTTATTGGTAGGGTGCATTTCATGCACCGTTAATAATACTT
GATGTGTGGAGAAGGCCCTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 179; Mature: 178

Protein sequence:

>179_residues
MANYRCADIKGGTYFFTVVTYRRQQILCNKKVMLALRNAIRDVQAIYPFEINGWVLLPDHLHCIWTLPVGDANFSMRWAM
IKRAVSKQCGPDLLHEELLNKSKRQRRESTIWQRRFWEHQIRNEDDYEKHLDYLHYNPVKHSYVNNVVDWPYSTYHRYLH
QGVYDDSWAGDGIDNGFGE

Sequences:

>Translated_179_residues
MANYRCADIKGGTYFFTVVTYRRQQILCNKKVMLALRNAIRDVQAIYPFEINGWVLLPDHLHCIWTLPVGDANFSMRWAM
IKRAVSKQCGPDLLHEELLNKSKRQRRESTIWQRRFWEHQIRNEDDYEKHLDYLHYNPVKHSYVNNVVDWPYSTYHRYLH
QGVYDDSWAGDGIDNGFGE
>Mature_178_residues
ANYRCADIKGGTYFFTVVTYRRQQILCNKKVMLALRNAIRDVQAIYPFEINGWVLLPDHLHCIWTLPVGDANFSMRWAMI
KRAVSKQCGPDLLHEELLNKSKRQRRESTIWQRRFWEHQIRNEDDYEKHLDYLHYNPVKHSYVNNVVDWPYSTYHRYLHQ
GVYDDSWAGDGIDNGFGE

Specific function: Unknown

COG id: COG1943

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_0217 [H]

Homologues:

Organism=Escherichia coli, GI1786422, Length=180, Percent_Identity=48.8888888888889, Blast_Score=167, Evalue=4e-43,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21398; Mature: 21267

Theoretical pI: Translated: 8.31; Mature: 8.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANYRCADIKGGTYFFTVVTYRRQQILCNKKVMLALRNAIRDVQAIYPFEINGWVLLPDH
CCCCEEEECCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCEEECCCC
LHCIWTLPVGDANFSMRWAMIKRAVSKQCGPDLLHEELLNKSKRQRRESTIWQRRFWEHQ
EEEEEEEECCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IRNEDDYEKHLDYLHYNPVKHSYVNNVVDWPYSTYHRYLHQGVYDDSWAGDGIDNGFGE
HCCCCCHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
ANYRCADIKGGTYFFTVVTYRRQQILCNKKVMLALRNAIRDVQAIYPFEINGWVLLPDH
CCCEEEECCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCEEECCCC
LHCIWTLPVGDANFSMRWAMIKRAVSKQCGPDLLHEELLNKSKRQRRESTIWQRRFWEHQ
EEEEEEEECCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IRNEDDYEKHLDYLHYNPVKHSYVNNVVDWPYSTYHRYLHQGVYDDSWAGDGIDNGFGE
HCCCCCHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7596361; 9278503 [H]