| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is galM [H]
Identifier: 119946146
GI number: 119946146
Start: 3062209
End: 3063276
Strand: Reverse
Name: galM [H]
Synonym: Ping_2506
Alternate gene names: 119946146
Gene position: 3063276-3062209 (Counterclockwise)
Preceding gene: 119946147
Following gene: 119946145
Centisome position: 67.18
GC content: 40.07
Gene sequence:
>1068_bases ATGTCACAAGCAAACTTCTTATTAATCCAAAGCTCCATGACTAAAACCAATGCGATTGATGGTAAACCAGCAAAGCTTTT ACATTTAACAAACCAACATGGCATGACCGCTACTTTCATGGATATAGGCGCAACATGGTTAAGCTGTACGTTACCAGTCA ATAAAGAACATCGGGAAATCCTACTCCGCTCGCTGAACATGGAAGAACACATAAAACAAACGGCATATTTTGGTTCTGTC GTTGGACGCTACGCAAATCGTATCAGTAGAGGAAAATTTTCGATCAATTCAAAACCGTATAAAATTACCATTAACGATGG TGACAACTCTCTGCATGGTGGTGTAAACGGATTTGATAAACGTCGTTGGACCATCGAATCGTCGAGAGAAAATAGCGTCA CCTTTTCTCTATATTCAAAAGATGGTGATCAAGGTTACCCAGCTAATTTACAAGTGAAAGTCACCTATACCTTGACCAAT GACAATGAGCTTGTGATCGATTATTTTGCCAAGTCGGATAGCAATTGCCCTGTAAACTTAACCAATCACGCTTATTTCAA TTTGGCTGGTGAGCAATCTAACGCGAAAAGCTTAGATCACACCCTACAGATGCACGCAGATCACTACTTGCCAACACATG ATGACTTAATTCCTACAGGGGAATTACGAGCAGTGAAATCTACCAGTTTTGATTTCAATCAAGAGAAAAAAATTGGAGCA GAATTTCTTTCTGAACAAGATCAAAAAATCGCGGGAGGCTATGACCATGCTTTTATTTTTAATAAGAAATTAACCAATGG TGAAGCAACAGTTGTTACCTTAACTTCACCAGAAAAAGAGGTGAGCATGCGAGTTTCAACTACCAAGCCTGCGATCCAAT TCTATTCAGGAAACTTTCTTGCCGAGACGCCCGGGGCATCAAAAATTTACCAAAATTATGACGGGCTAGCGTTAGAAACT CAATACTTACCAGATGGTCCAAACCATTCTGAATGGGGAGAGAGTAGCGGTATTTTAAGTGCTGAAGCGACATATCAGCA CCAAACTACCTATCAGTTTGAGTTCTAA
Upstream 100 bases:
>100_bases CCCGCTAATCTATTGACTAATATTTTTAGCTGAAAATTAGCTGAGTTGTCGATCTGCATGGCAATTTTTATATTTAATTC CAATCAACTAGAGAACTAAG
Downstream 100 bases:
>100_bases AAACATTTAATCTAAAAGGTGATGTTGGGTTGAAGGTCATAGAATTGATCAGGCAAACATGTAATTCTGTTGAGATTGAG ATTTTAAAAGGAGTTGTTAG
Product: aldose 1-epimerase
Products: NA
Alternate protein names: Galactose mutarotase; Type-1 mutarotase [H]
Number of amino acids: Translated: 355; Mature: 354
Protein sequence:
>355_residues MSQANFLLIQSSMTKTNAIDGKPAKLLHLTNQHGMTATFMDIGATWLSCTLPVNKEHREILLRSLNMEEHIKQTAYFGSV VGRYANRISRGKFSINSKPYKITINDGDNSLHGGVNGFDKRRWTIESSRENSVTFSLYSKDGDQGYPANLQVKVTYTLTN DNELVIDYFAKSDSNCPVNLTNHAYFNLAGEQSNAKSLDHTLQMHADHYLPTHDDLIPTGELRAVKSTSFDFNQEKKIGA EFLSEQDQKIAGGYDHAFIFNKKLTNGEATVVTLTSPEKEVSMRVSTTKPAIQFYSGNFLAETPGASKIYQNYDGLALET QYLPDGPNHSEWGESSGILSAEATYQHQTTYQFEF
Sequences:
>Translated_355_residues MSQANFLLIQSSMTKTNAIDGKPAKLLHLTNQHGMTATFMDIGATWLSCTLPVNKEHREILLRSLNMEEHIKQTAYFGSV VGRYANRISRGKFSINSKPYKITINDGDNSLHGGVNGFDKRRWTIESSRENSVTFSLYSKDGDQGYPANLQVKVTYTLTN DNELVIDYFAKSDSNCPVNLTNHAYFNLAGEQSNAKSLDHTLQMHADHYLPTHDDLIPTGELRAVKSTSFDFNQEKKIGA EFLSEQDQKIAGGYDHAFIFNKKLTNGEATVVTLTSPEKEVSMRVSTTKPAIQFYSGNFLAETPGASKIYQNYDGLALET QYLPDGPNHSEWGESSGILSAEATYQHQTTYQFEF >Mature_354_residues SQANFLLIQSSMTKTNAIDGKPAKLLHLTNQHGMTATFMDIGATWLSCTLPVNKEHREILLRSLNMEEHIKQTAYFGSVV GRYANRISRGKFSINSKPYKITINDGDNSLHGGVNGFDKRRWTIESSRENSVTFSLYSKDGDQGYPANLQVKVTYTLTND NELVIDYFAKSDSNCPVNLTNHAYFNLAGEQSNAKSLDHTLQMHADHYLPTHDDLIPTGELRAVKSTSFDFNQEKKIGAE FLSEQDQKIAGGYDHAFIFNKKLTNGEATVVTLTSPEKEVSMRVSTTKPAIQFYSGNFLAETPGASKIYQNYDGLALETQ YLPDGPNHSEWGESSGILSAEATYQHQTTYQFEF
Specific function: Mutarotase converts alpha-aldose to the beta-anomer. It is active on D-glucose, L-arabinose, D-xylose, D-galactose, maltose and lactose [H]
COG id: COG2017
COG function: function code G; Galactose mutarotase and related enzymes
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aldose epimerase family [H]
Homologues:
Organism=Homo sapiens, GI20270355, Length=297, Percent_Identity=39.3939393939394, Blast_Score=203, Evalue=2e-52, Organism=Escherichia coli, GI1786971, Length=342, Percent_Identity=45.0292397660819, Blast_Score=303, Evalue=8e-84, Organism=Caenorhabditis elegans, GI17557428, Length=330, Percent_Identity=31.2121212121212, Blast_Score=169, Evalue=2e-42, Organism=Caenorhabditis elegans, GI115533334, Length=330, Percent_Identity=31.2121212121212, Blast_Score=169, Evalue=2e-42, Organism=Saccharomyces cerevisiae, GI6319493, Length=335, Percent_Identity=27.4626865671642, Blast_Score=119, Evalue=6e-28, Organism=Saccharomyces cerevisiae, GI6322004, Length=357, Percent_Identity=30.5322128851541, Blast_Score=113, Evalue=4e-26, Organism=Saccharomyces cerevisiae, GI6324399, Length=354, Percent_Identity=25.9887005649718, Blast_Score=104, Evalue=2e-23, Organism=Drosophila melanogaster, GI24659048, Length=341, Percent_Identity=34.0175953079179, Blast_Score=181, Evalue=7e-46, Organism=Drosophila melanogaster, GI24668278, Length=332, Percent_Identity=33.433734939759, Blast_Score=177, Evalue=1e-44, Organism=Drosophila melanogaster, GI24583720, Length=332, Percent_Identity=31.9277108433735, Blast_Score=172, Evalue=3e-43, Organism=Drosophila melanogaster, GI24668282, Length=337, Percent_Identity=29.080118694362, Blast_Score=146, Evalue=3e-35, Organism=Drosophila melanogaster, GI24641876, Length=339, Percent_Identity=26.5486725663717, Blast_Score=131, Evalue=8e-31,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018052 - InterPro: IPR013458 - InterPro: IPR008183 - InterPro: IPR015443 - InterPro: IPR011013 - InterPro: IPR014718 [H]
Pfam domain/function: PF01263 Aldose_epim [H]
EC number: =5.1.3.3 [H]
Molecular weight: Translated: 39701; Mature: 39569
Theoretical pI: Translated: 6.32; Mature: 6.32
Prosite motif: PS00545 ALDOSE_1_EPIMERASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQANFLLIQSSMTKTNAIDGKPAKLLHLTNQHGMTATFMDIGATWLSCTLPVNKEHREI CCCCEEEEEECCCCCCCCCCCCCEEEEEEECCCCCEEEEEECCCEEEEEECCCCCHHHHH LLRSLNMEEHIKQTAYFGSVVGRYANRISRGKFSINSKPYKITINDGDNSLHGGVNGFDK HHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCEEEEEECCCCCCCCCCCCCCC RRWTIESSRENSVTFSLYSKDGDQGYPANLQVKVTYTLTNDNELVIDYFAKSDSNCPVNL EEEEEECCCCCEEEEEEEECCCCCCCCCEEEEEEEEEEECCCEEEEEEEECCCCCCCEEE TNHAYFNLAGEQSNAKSLDHTLQMHADHYLPTHDDLIPTGELRAVKSTSFDFNQEKKIGA CCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHH EFLSEQDQKIAGGYDHAFIFNKKLTNGEATVVTLTSPEKEVSMRVSTTKPAIQFYSGNFL HHHCCCCCHHCCCCCEEEEEEEEECCCCEEEEEEECCCCCEEEEEECCCCEEEEECCCEE AETPGASKIYQNYDGLALETQYLPDGPNHSEWGESSGILSAEATYQHQTTYQFEF EECCCHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCEEEEECEECCCEEEEEEC >Mature Secondary Structure SQANFLLIQSSMTKTNAIDGKPAKLLHLTNQHGMTATFMDIGATWLSCTLPVNKEHREI CCCEEEEEECCCCCCCCCCCCCEEEEEEECCCCCEEEEEECCCEEEEEECCCCCHHHHH LLRSLNMEEHIKQTAYFGSVVGRYANRISRGKFSINSKPYKITINDGDNSLHGGVNGFDK HHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCEEEEEECCCCCCCCCCCCCCC RRWTIESSRENSVTFSLYSKDGDQGYPANLQVKVTYTLTNDNELVIDYFAKSDSNCPVNL EEEEEECCCCCEEEEEEEECCCCCCCCCEEEEEEEEEEECCCEEEEEEEECCCCCCCEEE TNHAYFNLAGEQSNAKSLDHTLQMHADHYLPTHDDLIPTGELRAVKSTSFDFNQEKKIGA CCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHH EFLSEQDQKIAGGYDHAFIFNKKLTNGEATVVTLTSPEKEVSMRVSTTKPAIQFYSGNFL HHHCCCCCHHCCCCCEEEEEEEEECCCCEEEEEEECCCCCEEEEEECCCCEEEEECCCEE AETPGASKIYQNYDGLALETQYLPDGPNHSEWGESSGILSAEATYQHQTTYQFEF EECCCHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCEEEEECEECCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800; 1282642 [H]