| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is 119946143
Identifier: 119946143
GI number: 119946143
Start: 3056342
End: 3057103
Strand: Direct
Name: 119946143
Synonym: Ping_2499
Alternate gene names: NA
Gene position: 3056342-3057103 (Clockwise)
Preceding gene: 119946142
Following gene: 119946144
Centisome position: 67.03
GC content: 42.39
Gene sequence:
>762_bases ATGTTAGTATTTATCGCTTTAATAGCGGTTATCATCATCGGCTATATCACAGTCGGATATATTCGAACTCTGAAACGGGA ACAAAGAAAGAAAGTCGGTGCGAAAGCCGGCGTGCTCGCGTTTATCGCGACGCTAATCTTGCTAACAGTCACTGGAAAGC TTTATATTTTGGCAGCACTGGGAACAGGTTTAGTTGTATTTGCTAAGCGCTTGTTACCCTTTCTACGTTACTTTCCGTTT TTTAAAGGCCTTTACCAGAAGGCTAAAACTAAACAGAGTTCGGGTTCATCCAAGCATTCTACTGTTGAAACCAGTTTACT AAAAATGACCTTCGATCATGAAAGTGGTGAAGTAGATGGTGAATTATTGGACACTGTTAGCAAGGGTAAATATCTGTCTG AATTTGATCTGCCAGATTTAATCTCTCTCTATATCCTAGCTGGTAAGGAATATCCAGATGCTATTGAGATTTTGGCTGCC TATCTTGATCGCAAGTATGGTGCTGACTGGCGCGAAGCTGCCAATGCAGGAAATGGCTATCAAGAGAGCGGGCAAAAATC TCGTGGAAGCGATAGCAGTAAGATGACTGTAATTGAAGCTTATGCAGTACTGGGCCTTGATAATAACGCAACGGAGGAAG ATATTATCAAGGCCCACCGCAAACTGATGCTGAAACTCCACCCAGATAAGGGAGGAAGCAATTATCTGGCAGCAAAAATA AACCAGGCGAAAGATTTACTAGTGAGCAGCAAGGAGAAGTAA
Upstream 100 bases:
>100_bases CCGCCAATAATCCAACTGTTCCCACGGAAATAACAACACTGTAAATTAAAGAATAATTGGCTTTGCGGCTTAACTGATAC CTCAAATAAGAGAAAACTCT
Downstream 100 bases:
>100_bases GCGCAAGCCGCTCATACTTTTACATTTCTGCTGTCTAGCTCTTATTTAGACGCGGTGCTTCGGTAATCAGAGGGTATTTA AGAAGTCATTGTTGACTTCT
Product: heat shock protein DnaJ domain-containing protein
Products: NA
Alternate protein names: Heat Shock Protein DNAJ-Like; Heat Shock Protein DNAJ Domain Protein; DNAJ Domain Protein; Heat Shock Protein DNAJ N-Terminal; Heat Shock Protein DNAJ; DNAJ-Class Molecular Chaperone; DNAJ Domain-Containing Protein; Heat Shock Protein DNAJ N-Terminal Domain Protein; Heat Shock Protein
Number of amino acids: Translated: 253; Mature: 253
Protein sequence:
>253_residues MLVFIALIAVIIIGYITVGYIRTLKREQRKKVGAKAGVLAFIATLILLTVTGKLYILAALGTGLVVFAKRLLPFLRYFPF FKGLYQKAKTKQSSGSSKHSTVETSLLKMTFDHESGEVDGELLDTVSKGKYLSEFDLPDLISLYILAGKEYPDAIEILAA YLDRKYGADWREAANAGNGYQESGQKSRGSDSSKMTVIEAYAVLGLDNNATEEDIIKAHRKLMLKLHPDKGGSNYLAAKI NQAKDLLVSSKEK
Sequences:
>Translated_253_residues MLVFIALIAVIIIGYITVGYIRTLKREQRKKVGAKAGVLAFIATLILLTVTGKLYILAALGTGLVVFAKRLLPFLRYFPF FKGLYQKAKTKQSSGSSKHSTVETSLLKMTFDHESGEVDGELLDTVSKGKYLSEFDLPDLISLYILAGKEYPDAIEILAA YLDRKYGADWREAANAGNGYQESGQKSRGSDSSKMTVIEAYAVLGLDNNATEEDIIKAHRKLMLKLHPDKGGSNYLAAKI NQAKDLLVSSKEK >Mature_253_residues MLVFIALIAVIIIGYITVGYIRTLKREQRKKVGAKAGVLAFIATLILLTVTGKLYILAALGTGLVVFAKRLLPFLRYFPF FKGLYQKAKTKQSSGSSKHSTVETSLLKMTFDHESGEVDGELLDTVSKGKYLSEFDLPDLISLYILAGKEYPDAIEILAA YLDRKYGADWREAANAGNGYQESGQKSRGSDSSKMTVIEAYAVLGLDNNATEEDIIKAHRKLMLKLHPDKGGSNYLAAKI NQAKDLLVSSKEK
Specific function: Unknown
COG id: COG2214
COG function: function code O; DnaJ-class molecular chaperone
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI21687102, Length=71, Percent_Identity=52.112676056338, Blast_Score=69, Evalue=5e-12, Organism=Homo sapiens, GI298231213, Length=71, Percent_Identity=52.112676056338, Blast_Score=67, Evalue=1e-11, Organism=Caenorhabditis elegans, GI17509089, Length=64, Percent_Identity=53.125, Blast_Score=68, Evalue=4e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27834; Mature: 27834
Theoretical pI: Translated: 9.83; Mature: 9.83
Prosite motif: PS50076 DNAJ_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLVFIALIAVIIIGYITVGYIRTLKREQRKKVGAKAGVLAFIATLILLTVTGKLYILAAL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH GTGLVVFAKRLLPFLRYFPFFKGLYQKAKTKQSSGSSKHSTVETSLLKMTFDHESGEVDG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHEECCCCCCCCH ELLDTVSKGKYLSEFDLPDLISLYILAGKEYPDAIEILAAYLDRKYGADWREAANAGNGY HHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHCCCCCC QESGQKSRGSDSSKMTVIEAYAVLGLDNNATEEDIIKAHRKLMLKLHPDKGGSNYLAAKI HHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHEEEECCCCCCCCEEHHHH NQAKDLLVSSKEK HHHHHHHHCCCCC >Mature Secondary Structure MLVFIALIAVIIIGYITVGYIRTLKREQRKKVGAKAGVLAFIATLILLTVTGKLYILAAL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH GTGLVVFAKRLLPFLRYFPFFKGLYQKAKTKQSSGSSKHSTVETSLLKMTFDHESGEVDG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHEECCCCCCCCH ELLDTVSKGKYLSEFDLPDLISLYILAGKEYPDAIEILAAYLDRKYGADWREAANAGNGY HHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHCCCCCC QESGQKSRGSDSSKMTVIEAYAVLGLDNNATEEDIIKAHRKLMLKLHPDKGGSNYLAAKI HHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHEEEECCCCCCCCEEHHHH NQAKDLLVSSKEK HHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA