| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is mod [H]
Identifier: 119946134
GI number: 119946134
Start: 3041144
End: 3043120
Strand: Reverse
Name: mod [H]
Synonym: Ping_2487
Alternate gene names: 119946134
Gene position: 3043120-3041144 (Counterclockwise)
Preceding gene: 119946135
Following gene: 119946133
Centisome position: 66.74
GC content: 36.52
Gene sequence:
>1977_bases ATGGATAAATTAAAAATGCACAGCCCTAACTTGGTTGACCAAAATTTAGAAAAAATGGCCGAGTTATTTCCAAATTGTAT TACTGAAGCTAAAGATGAACTTGGACAGCTTAAAAAGTCCATCGATTTTGATTTGCTTAAGCAAGAACTTTCTCGCCACA TTGTTGATGGCCCACAAGAACGCTATCAACTTAACTGGCCAGGTAAGCGCGAAGCGCTGTTAACAGCCAATGCTCCAATT GCTAAAACATTACGACCGTGTCGCGAAGAAAGTGTCAATTTTGATACTACAGAAAACCTTTTTATTGAAGGTGATAACCT AGATGCTTTAAAGCTTTTACAAGAAACGTACCTTGGTAAAGTGAAGATGATATACATCGATCCTCCATACAATACTGGGA ATGATTTTATCTATAAAGATGATTTCGCAGAAAATGCAGATTCCTATGCGAAGAAATCTAATCAACAAGATGAAATAGGT AATCGCTTAGTTGCTAATACAGATTCCAACGGGCGTTATCATTCTGATTGGACTTCAATGATATACTCGCGACTGAGGTT AGCCAGAAACTTACTTACGGAAGATGGTGTTATTTTTATGTCTATTGGACAGGAAGAAGTCGCAGCATCCTGTCAAATAT TGAATGAAGTTCTAGGTGAGAATAACTTTATTACAATAATTTCAAGAGTAATGAAAACCGGGGGACAGAAAGGTGTTCAT TTCTCTCCTTGTGTTGATTATATTCTTGTATATGCGAAAAAAATTGAACATCTAAATCAATTTCGAGAAGAAATAAGTCA AAATGTAATAGATAAAGTTTATACAAAAACGTGTACAGAAGGGCTGAGGAAGGGCGAAAAATATCGTTCGATGGGGTTGT ATCAAGCAATGTTAGATAAACGCGCTAACCAGCGATATTACATCGAATGTCCAGATGGATCTTATGTTATACCACCAGGT GAATTGATGCCAAACTCACCTAAAGATGGAAATAAGGTAACACCTCAAGATGGTGACGGTGTATGGAGGTGGACATATGA ACGTTTTGCTAGAGAAAGAGCCGCCGGTAATGTTGAATTCATCGCATCAGATAGAACATCACTTATTGATAATGAAGGGA AGCAAGCAAAGTGGAATGTATATTATCGGATTTGGCTAAAAGATCGTATGCGAGATGGTCAATTACCGGGAAATATAACT GAAAAATTTCAGAGTCGTCATAGTTCAGCCGAATTAAAAAATATTGGGATACCATTTGATTTCCCTAAACCTACAAGTCT CATTAGATATTTAATGACTTTGGTTTCTCTAAATGATAACGATGTTATTCTTGATTTTTTTGCTGGTTCCGGGACTACTG CGCATGCCTCAATTGAATATGCTAAAGATAACAATTGCAACAATAAATTTGTTTGCGTTCAGTTAAGAGAGGAAACGAAT AAAAATTCTTCAGAATATAAAGCGGGATATGAAGCAATTTCAGATATTACTAAAGAACGTATACGGAGGGCTGGCCAAAA AATACTATCTGATAATGCTGCAAAAGATGGTATAGAAAAGCTAGATGTGGGTTTTCGTGTTCTAAAAGTTGATAGTTCCA ATATGGCTGACGTTCATTACAATCCTGGCGCTGTTTCTCAAGCCGGGTTATTTGATCAAGTTGAAAATGTAAAAGAAAAC CGTACGGAAGAAGATTTATTATTTCAAGTGATACTTGATTGGGGCGTCGATTTAACCTTGCCTATTCGTAAAGAAACCAT TGATGGTAAAACCGTGTTTTTTGTTGATAACAACGCACTTGTTGCTTGTTTTGATAACAGCGGAAAAGTATCTGAATCCT TTGTTAAACAACTCGCTGAATTTGAACCAATGCGTTTAGTTTTCCGTGATGGCGGTTTTGCCTCTGATAGCGCCAAAATT AATGTTGAACAAGTATTAAAACAACTTTCACCACTTACCGATATGAAGTCGATTTAA
Upstream 100 bases:
>100_bases TTAAACAGCTTTCACCACTTACCGATATTAAGTCGATTTAAAGCCAATCACAAAATTCAGACGTGGCTTTTAATCTATGT CTAGAAAATGAGAGATAAAA
Downstream 100 bases:
>100_bases GGAAATAACCATGAAGTTAAAATTTAAACATCAGGGTTATCAAGCCGACTCTGTTCAAGCGATAGTAGATTGTTTTAAAG GGCAATTAATTAATGATACT
Product: DNA methylase N-4/N-6 domain-containing protein
Products: NA
Alternate protein names: M.EcoP15I; EcoP15I methyltransferase [H]
Number of amino acids: Translated: 658; Mature: 658
Protein sequence:
>658_residues MDKLKMHSPNLVDQNLEKMAELFPNCITEAKDELGQLKKSIDFDLLKQELSRHIVDGPQERYQLNWPGKREALLTANAPI AKTLRPCREESVNFDTTENLFIEGDNLDALKLLQETYLGKVKMIYIDPPYNTGNDFIYKDDFAENADSYAKKSNQQDEIG NRLVANTDSNGRYHSDWTSMIYSRLRLARNLLTEDGVIFMSIGQEEVAASCQILNEVLGENNFITIISRVMKTGGQKGVH FSPCVDYILVYAKKIEHLNQFREEISQNVIDKVYTKTCTEGLRKGEKYRSMGLYQAMLDKRANQRYYIECPDGSYVIPPG ELMPNSPKDGNKVTPQDGDGVWRWTYERFARERAAGNVEFIASDRTSLIDNEGKQAKWNVYYRIWLKDRMRDGQLPGNIT EKFQSRHSSAELKNIGIPFDFPKPTSLIRYLMTLVSLNDNDVILDFFAGSGTTAHASIEYAKDNNCNNKFVCVQLREETN KNSSEYKAGYEAISDITKERIRRAGQKILSDNAAKDGIEKLDVGFRVLKVDSSNMADVHYNPGAVSQAGLFDQVENVKEN RTEEDLLFQVILDWGVDLTLPIRKETIDGKTVFFVDNNALVACFDNSGKVSESFVKQLAEFEPMRLVFRDGGFASDSAKI NVEQVLKQLSPLTDMKSI
Sequences:
>Translated_658_residues MDKLKMHSPNLVDQNLEKMAELFPNCITEAKDELGQLKKSIDFDLLKQELSRHIVDGPQERYQLNWPGKREALLTANAPI AKTLRPCREESVNFDTTENLFIEGDNLDALKLLQETYLGKVKMIYIDPPYNTGNDFIYKDDFAENADSYAKKSNQQDEIG NRLVANTDSNGRYHSDWTSMIYSRLRLARNLLTEDGVIFMSIGQEEVAASCQILNEVLGENNFITIISRVMKTGGQKGVH FSPCVDYILVYAKKIEHLNQFREEISQNVIDKVYTKTCTEGLRKGEKYRSMGLYQAMLDKRANQRYYIECPDGSYVIPPG ELMPNSPKDGNKVTPQDGDGVWRWTYERFARERAAGNVEFIASDRTSLIDNEGKQAKWNVYYRIWLKDRMRDGQLPGNIT EKFQSRHSSAELKNIGIPFDFPKPTSLIRYLMTLVSLNDNDVILDFFAGSGTTAHASIEYAKDNNCNNKFVCVQLREETN KNSSEYKAGYEAISDITKERIRRAGQKILSDNAAKDGIEKLDVGFRVLKVDSSNMADVHYNPGAVSQAGLFDQVENVKEN RTEEDLLFQVILDWGVDLTLPIRKETIDGKTVFFVDNNALVACFDNSGKVSESFVKQLAEFEPMRLVFRDGGFASDSAKI NVEQVLKQLSPLTDMKSI >Mature_658_residues MDKLKMHSPNLVDQNLEKMAELFPNCITEAKDELGQLKKSIDFDLLKQELSRHIVDGPQERYQLNWPGKREALLTANAPI AKTLRPCREESVNFDTTENLFIEGDNLDALKLLQETYLGKVKMIYIDPPYNTGNDFIYKDDFAENADSYAKKSNQQDEIG NRLVANTDSNGRYHSDWTSMIYSRLRLARNLLTEDGVIFMSIGQEEVAASCQILNEVLGENNFITIISRVMKTGGQKGVH FSPCVDYILVYAKKIEHLNQFREEISQNVIDKVYTKTCTEGLRKGEKYRSMGLYQAMLDKRANQRYYIECPDGSYVIPPG ELMPNSPKDGNKVTPQDGDGVWRWTYERFARERAAGNVEFIASDRTSLIDNEGKQAKWNVYYRIWLKDRMRDGQLPGNIT EKFQSRHSSAELKNIGIPFDFPKPTSLIRYLMTLVSLNDNDVILDFFAGSGTTAHASIEYAKDNNCNNKFVCVQLREETN KNSSEYKAGYEAISDITKERIRRAGQKILSDNAAKDGIEKLDVGFRVLKVDSSNMADVHYNPGAVSQAGLFDQVENVKEN RTEEDLLFQVILDWGVDLTLPIRKETIDGKTVFFVDNNALVACFDNSGKVSESFVKQLAEFEPMRLVFRDGGFASDSAKI NVEQVLKQLSPLTDMKSI
Specific function: Binds the system-specific DNA recognition site 5'- CAGCAC-3'. Necessary for both restriction and methylation (of one of the two A's) [H]
COG id: COG2189
COG function: function code L; Adenine specific DNA methylase Mod
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the N(4)/N(6)-methyltransferase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002295 - InterPro: IPR002941 - InterPro: IPR002052 [H]
Pfam domain/function: PF01555 N6_N4_Mtase [H]
EC number: =2.1.1.72 [H]
Molecular weight: Translated: 74777; Mature: 74777
Theoretical pI: Translated: 5.17; Mature: 5.17
Prosite motif: PS00092 N6_MTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDKLKMHSPNLVDQNLEKMAELFPNCITEAKDELGQLKKSIDFDLLKQELSRHIVDGPQE CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHH RYQLNWPGKREALLTANAPIAKTLRPCREESVNFDTTENLFIEGDNLDALKLLQETYLGK CEEECCCCCCCEEEECCCCHHHHHHHHHHHCCCCCCCCCEEEECCCCHHHHHHHHHHCCC VKMIYIDPPYNTGNDFIYKDDFAENADSYAKKSNQQDEIGNRLVANTDSNGRYHSDWTSM EEEEEECCCCCCCCCCEECCCHHCCHHHHHHCCCCHHHHCCEEEECCCCCCCCCHHHHHH IYSRLRLARNLLTEDGVIFMSIGQEEVAASCQILNEVLGENNFITIISRVMKTGGQKGVH HHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCC FSPCVDYILVYAKKIEHLNQFREEISQNVIDKVYTKTCTEGLRKGEKYRSMGLYQAMLDK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH RANQRYYIECPDGSYVIPPGELMPNSPKDGNKVTPQDGDGVWRWTYERFARERAAGNVEF CCCCEEEEECCCCCEECCCHHHCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHCCCCEEE IASDRTSLIDNEGKQAKWNVYYRIWLKDRMRDGQLPGNITEKFQSRHSSAELKNIGIPFD EECCCHHHHCCCCCCEEEEEEEEEEEECCCCCCCCCCHHHHHHHHHCCCCHHHHCCCCCC FPKPTSLIRYLMTLVSLNDNDVILDFFAGSGTTAHASIEYAKDNNCNNKFVCVQLREETN CCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCEEEEEEEECCCCCCCCCEEEEEECCCCC KNSSEYKAGYEAISDITKERIRRAGQKILSDNAAKDGIEKLDVGFRVLKVDSSNMADVHY CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCEEEEEECCCCCCEEEE NPGAVSQAGLFDQVENVKENRTEEDLLFQVILDWGVDLTLPIRKETIDGKTVFFVDNNAL CCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEECHHCCCCCCEEEEEECCEE VACFDNSGKVSESFVKQLAEFEPMRLVFRDGGFASDSAKINVEQVLKQLSPLTDMKSI EEEECCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHHCCCHHHCCC >Mature Secondary Structure MDKLKMHSPNLVDQNLEKMAELFPNCITEAKDELGQLKKSIDFDLLKQELSRHIVDGPQE CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHH RYQLNWPGKREALLTANAPIAKTLRPCREESVNFDTTENLFIEGDNLDALKLLQETYLGK CEEECCCCCCCEEEECCCCHHHHHHHHHHHCCCCCCCCCEEEECCCCHHHHHHHHHHCCC VKMIYIDPPYNTGNDFIYKDDFAENADSYAKKSNQQDEIGNRLVANTDSNGRYHSDWTSM EEEEEECCCCCCCCCCEECCCHHCCHHHHHHCCCCHHHHCCEEEECCCCCCCCCHHHHHH IYSRLRLARNLLTEDGVIFMSIGQEEVAASCQILNEVLGENNFITIISRVMKTGGQKGVH HHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCC FSPCVDYILVYAKKIEHLNQFREEISQNVIDKVYTKTCTEGLRKGEKYRSMGLYQAMLDK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH RANQRYYIECPDGSYVIPPGELMPNSPKDGNKVTPQDGDGVWRWTYERFARERAAGNVEF CCCCEEEEECCCCCEECCCHHHCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHCCCCEEE IASDRTSLIDNEGKQAKWNVYYRIWLKDRMRDGQLPGNITEKFQSRHSSAELKNIGIPFD EECCCHHHHCCCCCCEEEEEEEEEEEECCCCCCCCCCHHHHHHHHHCCCCHHHHCCCCCC FPKPTSLIRYLMTLVSLNDNDVILDFFAGSGTTAHASIEYAKDNNCNNKFVCVQLREETN CCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCEEEEEEEECCCCCCCCCEEEEEECCCCC KNSSEYKAGYEAISDITKERIRRAGQKILSDNAAKDGIEKLDVGFRVLKVDSSNMADVHY CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCEEEEEECCCCCCEEEE NPGAVSQAGLFDQVENVKENRTEEDLLFQVILDWGVDLTLPIRKETIDGKTVFFVDNNAL CCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEECHHCCCCCCEEEEEECCEE VACFDNSGKVSESFVKQLAEFEPMRLVFRDGGFASDSAKINVEQVLKQLSPLTDMKSI EEEECCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHHCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2837577 [H]