| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is 119946129
Identifier: 119946129
GI number: 119946129
Start: 3032821
End: 3033588
Strand: Reverse
Name: 119946129
Synonym: Ping_2481
Alternate gene names: NA
Gene position: 3033588-3032821 (Counterclockwise)
Preceding gene: 119946130
Following gene: 119946128
Centisome position: 66.53
GC content: 36.72
Gene sequence:
>768_bases ATGATGCCTATCCTCAAAAATCCAACGATTGTAAATGAAGATGAATTAACCATGAGCTCGGTGGAAATTGCATATCTAAC CGGTAAAAAGCATAAGAATGTTATGCGTGATATTAGGAATATGTTTACAGCGCTTCAAATAGGTGGGCTCAAATCTGAGC CCACCTATTTCAATCAACAAAACAAGGAAGGTAAATGTTATTGCCTTTCTAAGGAGTTAACACTAACCCTTGTTTCAGGT TATAGCATTCAGATGCGGCATCTGATAATTAAACGATGGCTGGAACTGGAACAAGTGCAACCAATAGTATTACCTGATTT TAATAACCCAGTCGTTGCCGCAAGGGCTTGGGCAACTAGTGTCGAAGCGTCTTTAAAATTAAATGGTGTAAATAACAAAT TAAAGTGTGAAATAAAGCAATTGAAAATCGATAACAACATGCTGGAAAAACAGTTTTCTGCCGGGCTTACAGCTCCTGGA TTTTGTCGGCAATTAAATGGAGTTAACCTTAATCGGGTATCAGGTTGGCTTATGGATAAAAACTTATTCTATCAATTTAA AAGGGGATATAAAGTCAAAAGGAGTGGTCAGAATGGGCGATTTAAAGAGGAAATTATACCGTGTTCAGATGGTGAATTTA GTCATAAAGTGGTTCTTACCGAGAAAGGTGCCAAGTGGCTTTATGGACAATATTTAAACAATAAATTACCAATGAAAAAG GATTGGGATGGAAAGTTTACGCATGATTTGTTTCAAGAAGTGGAATAA
Upstream 100 bases:
>100_bases CTGCGCGTATTGCAGGATGCTCAAATGAAGAAATTAAATTGTTAGTGAAAAATTTAATTGAAGAGCGTCAGGCAGACTTT AAAAAAACAGGGGGCACACT
Downstream 100 bases:
>100_bases TAAATAAAGAGCGCTCAGGTATACCGAGCGCATAATTTAAGCATTGGTTGCAATTGCCCTGGTAAGTACATTGCAACCAA CAACATAAGGTTAACTTATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 255; Mature: 255
Protein sequence:
>255_residues MMPILKNPTIVNEDELTMSSVEIAYLTGKKHKNVMRDIRNMFTALQIGGLKSEPTYFNQQNKEGKCYCLSKELTLTLVSG YSIQMRHLIIKRWLELEQVQPIVLPDFNNPVVAARAWATSVEASLKLNGVNNKLKCEIKQLKIDNNMLEKQFSAGLTAPG FCRQLNGVNLNRVSGWLMDKNLFYQFKRGYKVKRSGQNGRFKEEIIPCSDGEFSHKVVLTEKGAKWLYGQYLNNKLPMKK DWDGKFTHDLFQEVE
Sequences:
>Translated_255_residues MMPILKNPTIVNEDELTMSSVEIAYLTGKKHKNVMRDIRNMFTALQIGGLKSEPTYFNQQNKEGKCYCLSKELTLTLVSG YSIQMRHLIIKRWLELEQVQPIVLPDFNNPVVAARAWATSVEASLKLNGVNNKLKCEIKQLKIDNNMLEKQFSAGLTAPG FCRQLNGVNLNRVSGWLMDKNLFYQFKRGYKVKRSGQNGRFKEEIIPCSDGEFSHKVVLTEKGAKWLYGQYLNNKLPMKK DWDGKFTHDLFQEVE >Mature_255_residues MMPILKNPTIVNEDELTMSSVEIAYLTGKKHKNVMRDIRNMFTALQIGGLKSEPTYFNQQNKEGKCYCLSKELTLTLVSG YSIQMRHLIIKRWLELEQVQPIVLPDFNNPVVAARAWATSVEASLKLNGVNNKLKCEIKQLKIDNNMLEKQFSAGLTAPG FCRQLNGVNLNRVSGWLMDKNLFYQFKRGYKVKRSGQNGRFKEEIIPCSDGEFSHKVVLTEKGAKWLYGQYLNNKLPMKK DWDGKFTHDLFQEVE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29344; Mature: 29344
Theoretical pI: Translated: 9.82; Mature: 9.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMPILKNPTIVNEDELTMSSVEIAYLTGKKHKNVMRDIRNMFTALQIGGLKSEPTYFNQQ CCCCCCCCEEECCCCCEEEEEEEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC NKEGKCYCLSKELTLTLVSGYSIQMRHLIIKRWLELEQVQPIVLPDFNNPVVAARAWATS CCCCCEEEEECCEEEEEECCCCHHHHHHHHHHHHHHHHCCCEEECCCCCCEEEEEHHHHC VEASLKLNGVNNKLKCEIKQLKIDNNMLEKQFSAGLTAPGFCRQLNGVNLNRVSGWLMDK CEEEEEEECCCCEEEEEEEEEECCCHHHHHHHHCCCCCCHHHHHHCCCCCHHHHCEEECH NLFYQFKRGYKVKRSGQNGRFKEEIIPCSDGEFSHKVVLTEKGAKWLYGQYLNNKLPMKK HHHHHHHCCEEEEECCCCCCCHHHEECCCCCCCCEEEEEEECCCCHHHHHHHCCCCCCCC DWDGKFTHDLFQEVE CCCCCHHHHHHHHCC >Mature Secondary Structure MMPILKNPTIVNEDELTMSSVEIAYLTGKKHKNVMRDIRNMFTALQIGGLKSEPTYFNQQ CCCCCCCCEEECCCCCEEEEEEEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC NKEGKCYCLSKELTLTLVSGYSIQMRHLIIKRWLELEQVQPIVLPDFNNPVVAARAWATS CCCCCEEEEECCEEEEEECCCCHHHHHHHHHHHHHHHHCCCEEECCCCCCEEEEEHHHHC VEASLKLNGVNNKLKCEIKQLKIDNNMLEKQFSAGLTAPGFCRQLNGVNLNRVSGWLMDK CEEEEEEECCCCEEEEEEEEEECCCHHHHHHHHCCCCCCHHHHHHCCCCCHHHHCEEECH NLFYQFKRGYKVKRSGQNGRFKEEIIPCSDGEFSHKVVLTEKGAKWLYGQYLNNKLPMKK HHHHHHHCCEEEEECCCCCCCHHHEECCCCCCCCEEEEEEECCCCHHHHHHHCCCCCCCC DWDGKFTHDLFQEVE CCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA