| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is 119946121
Identifier: 119946121
GI number: 119946121
Start: 3021959
End: 3022711
Strand: Reverse
Name: 119946121
Synonym: Ping_2472
Alternate gene names: NA
Gene position: 3022711-3021959 (Counterclockwise)
Preceding gene: 119946122
Following gene: 119946120
Centisome position: 66.29
GC content: 32.54
Gene sequence:
>753_bases TTGTTTGAATTGTCAGAGCGTGGTTACAGTCTTCAACTAATCGAAATAATGGGGTTAATTGAATTTTCATATGAAATTTC AACAGCAACACTTAATGGATGGCGAGTCACCCCATTTGGTCAATTTTTTTTCAATGAGAATTACCAATGCATTGTTTTAC CTCAAACAAAGCTTGAACAGTTTGTGCAACTGATTGATCAATTGAGAGTGCAGTTGTTTTTTGACAAAATAAGTATTCAA GATGTTGAATATAAGATTAAATTTTCGTTAAGCAACTTATTTGAATTACATATATCGGTGCTTGATTTTAATTTTCCGGT TAATCTTGTCTATCAGGTTGAAACGGAACCTAAGCAATATAGGTTCGAGCAGATGACTTCTCTTATTGATCTCAATAGTG AGCTAACTCAACTTAAGAGTTGTCTTGATTACATCATTAATAATGGAAATGATCTCGTTCATTCTATTGATGCTTTAGTT AATAACATTAAATACGGCCAAGAAAAATTTATATCGGAAGATCATTATGCTCAAAAACGAGGATTGTTAAAAAAAGCATT CAAAAATGGTGAAATATCACAAGCGGAATATATTACTCAAGTTGATGAGATAAAGCTTAGTCGTCATCAACGATTAAATG TAAAAACTAAACTGATAGCTGAGTTCCATGACTTATATGCCCACAAATGGGGAAATGCAGTCGGCAGATTTTTTAAGGAA TTTTTAATAATGCGATTCCCACAACACCCCTAA
Upstream 100 bases:
>100_bases AATAGTTATCACTAAAGGAATTCTTATCAGCTTAACAAAAGAATATTTTTCAGACCGAGATAGCTGGCTTGAAGAGTGCA AAGAAAACGGTGATTTAACG
Downstream 100 bases:
>100_bases TTATCGAGTTTTCCGCTATCGTTCCTTTGCAGAATGGGACAGGGTTAATTGCATCCAAAATTTAGGCTAAGGTGTGTTTT ACAGTATTTAATCGGCTCAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 250; Mature: 250
Protein sequence:
>250_residues MFELSERGYSLQLIEIMGLIEFSYEISTATLNGWRVTPFGQFFFNENYQCIVLPQTKLEQFVQLIDQLRVQLFFDKISIQ DVEYKIKFSLSNLFELHISVLDFNFPVNLVYQVETEPKQYRFEQMTSLIDLNSELTQLKSCLDYIINNGNDLVHSIDALV NNIKYGQEKFISEDHYAQKRGLLKKAFKNGEISQAEYITQVDEIKLSRHQRLNVKTKLIAEFHDLYAHKWGNAVGRFFKE FLIMRFPQHP
Sequences:
>Translated_250_residues MFELSERGYSLQLIEIMGLIEFSYEISTATLNGWRVTPFGQFFFNENYQCIVLPQTKLEQFVQLIDQLRVQLFFDKISIQ DVEYKIKFSLSNLFELHISVLDFNFPVNLVYQVETEPKQYRFEQMTSLIDLNSELTQLKSCLDYIINNGNDLVHSIDALV NNIKYGQEKFISEDHYAQKRGLLKKAFKNGEISQAEYITQVDEIKLSRHQRLNVKTKLIAEFHDLYAHKWGNAVGRFFKE FLIMRFPQHP >Mature_250_residues MFELSERGYSLQLIEIMGLIEFSYEISTATLNGWRVTPFGQFFFNENYQCIVLPQTKLEQFVQLIDQLRVQLFFDKISIQ DVEYKIKFSLSNLFELHISVLDFNFPVNLVYQVETEPKQYRFEQMTSLIDLNSELTQLKSCLDYIINNGNDLVHSIDALV NNIKYGQEKFISEDHYAQKRGLLKKAFKNGEISQAEYITQVDEIKLSRHQRLNVKTKLIAEFHDLYAHKWGNAVGRFFKE FLIMRFPQHP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29530; Mature: 29530
Theoretical pI: Translated: 6.17; Mature: 6.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFELSERGYSLQLIEIMGLIEFSYEISTATLNGWRVTPFGQFFFNENYQCIVLPQTKLEQ CCCCCCCCCCEEHHHHHHHHHHEEEEEEEEECCEEECCCHHHHCCCCCEEEEECHHHHHH FVQLIDQLRVQLFFDKISIQDVEYKIKFSLSNLFELHISVLDFNFPVNLVYQVETEPKQY HHHHHHHHHHHHHHHHHCEEEEEEEEEEEHHHHHHHHHHEEEECCCEEEEEEECCCHHHH RFEQMTSLIDLNSELTQLKSCLDYIINNGNDLVHSIDALVNNIKYGQEKFISEDHYAQKR HHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHCCCHHHHHHH GLLKKAFKNGEISQAEYITQVDEIKLSRHQRLNVKTKLIAEFHDLYAHKWGNAVGRFFKE HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH FLIMRFPQHP HHHHHCCCCC >Mature Secondary Structure MFELSERGYSLQLIEIMGLIEFSYEISTATLNGWRVTPFGQFFFNENYQCIVLPQTKLEQ CCCCCCCCCCEEHHHHHHHHHHEEEEEEEEECCEEECCCHHHHCCCCCEEEEECHHHHHH FVQLIDQLRVQLFFDKISIQDVEYKIKFSLSNLFELHISVLDFNFPVNLVYQVETEPKQY HHHHHHHHHHHHHHHHHCEEEEEEEEEEEHHHHHHHHHHEEEECCCEEEEEEECCCHHHH RFEQMTSLIDLNSELTQLKSCLDYIINNGNDLVHSIDALVNNIKYGQEKFISEDHYAQKR HHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHCCCHHHHHHH GLLKKAFKNGEISQAEYITQVDEIKLSRHQRLNVKTKLIAEFHDLYAHKWGNAVGRFFKE HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH FLIMRFPQHP HHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA