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The map label for this gene is dexB [H]

Identifier: 119946039

GI number: 119946039

Start: 2899906

End: 2901606

Strand: Reverse

Name: dexB [H]

Synonym: Ping_2383

Alternate gene names: 119946039

Gene position: 2901606-2899906 (Counterclockwise)

Preceding gene: 119946040

Following gene: 119946038

Centisome position: 63.64

GC content: 46.03

Gene sequence:

>1701_bases
ATGACAATTGTGATGACAATGGATGCTAAAAAAAATGAGACTGGCACAGTACCTGAATCAGATAAAAAATGGTGGCATAA
TGCCGTCGTTTATCAGATCTACCCTCATAGTTTTATGGATGCCAATCATGATGGCATAGGCGATTTGGCGGGGATCATCA
GTAAACTTGATTACCTCAAGCAATTAGGCATTAATGTTATCTGGTTATCGCCGGTGTTCAAGTCTCCGATGGATGATAAC
GGTTATGATATTTCCGACTATCAGGATATCGCCTCAGAATTCGGCACGTTAGAGGAAATGAATAAGCTGATTGCTGAAGC
TGCGAAACGTGATATCCGTATTATTATGGATCTGGTGATCAACCACAGCAGTGACGAGCATCCCTGGTTTATTGAGTCAA
GAAAATCTAAAGATAACTTTTATCGCGATTATTACATTTGGCGTGAGCCAAAAGCCGATGGCTCAGCGCCGAATGATTTC
AAATCTTATTTTGGCGGCAGTGCTTGGGAGTTTGATGGTACTACGGGGCAATATTATTTCCACCAGTTCTCTAAAAAGCA
GCCGGATCTAAACTGGGATAATCCCAAGGTGCAGGAAGAGGTGCATAAGATGATCAACTGGTGGTTAGACCGTGGCATAG
GTGGTTTCCGGATGGATGTGATCGACTTGATTGGCAAGGATGTGGATAAGCAGATTATGACCAACGGGCCGCGCCTGCAT
CCACTATTGCAAGAGATGAATAAAGCAACTTTTGGTGGGCGCGATTTACTGACCGTCGGTGAAGCGTGGAGCGCAACCCC
GGAGACTGCCAAGCTGTATTCCGATCCGGCCCGCGATGAACTCTCCATGGTGTTTCAGTTTGAGCATATCACCATCACCT
TTGATCCCGAGCAAGGTAAATGGAAACCTCGGCCGTTTGATCTGCTGGAGTTCAAGCAGGTAATCAGCAAGTGGCAAACT
GAACTTGCTGATTGTGGTTGGAACTCGTTGTTCTGGAATAACCATGATCTGCCGCGCGCGGTTTCAAAATATGGCGATCC
GGGGTGCTACCGCGTGCAGTCCGCTAAAATGCTGGCGACTGCGCTGCATTTCCTCAAAGGTATACCGTATATCTATCAGG
GAGAAGAGATAGGCATGACCAATGTGCATTTCGATGCCATTGAGGATTATCAGGATATTGAAACCCTGAATCTTTATCAG
GAGCGTATTGCAGCGGGCGTCTCGCATGAGGATATGATGCAGGGGATCCATGAAAATGGTCGTGACAATGCCCGCACACC
TATGCAGTGGGATAGCAGCCTTAACAGCGGTTTTAGTGATGGTAACCCCTGGCTTAAGCTCAATCCAAATTATACCGAAA
TTAATGTCGAGTCGGCATTGGATGATCCTGATTCCATTTTTTACCACTACCAAAAACTGGTTCAGTTGCGCAAGACCCAC
GAGGTAATGGTCTATGGTGATTATCAGCCATTGTTTGTTGAGCATAAAAAGGTATTTTCCTACCAGCGGCAGTTAGGTAA
TGAGAAAGTTATCGTTATTAATAACTTCACGAATGAGCCGCTGGAGCTGACCTTGCCAAAACCACTGCAGGGATTGAAAG
GGCAATGCCTGATTAGCAATTATGCGCCGCGTAAGCAGTTAAGCGAGTCACTCGCGCTTGCACCCTATGAGTCTTTTGCA
CTGCTCATTAAGCCGTGTTAA

Upstream 100 bases:

>100_bases
GAAAGATGCGAGAAAATAGCATTTCAGTCTATGTTAGTTGCTGCTTATGATAGTGCCTATTCAAGATCAATCTGCACGGT
TATTTTCAAGGACAATAGCG

Downstream 100 bases:

>100_bases
AGAATACCGGATATATGAATAATAAGTTTCTAATAAGGAAAATAAGATGAAACAGGTTAGTTTGGTCGGCGATGTGGGCG
GCACTAATGCACGTCTGGCA

Product: dextran glucosidase

Products: NA

Alternate protein names: Dextran glucosidase; Exo-1,6-alpha-glucosidase; Glucodextranase [H]

Number of amino acids: Translated: 566; Mature: 565

Protein sequence:

>566_residues
MTIVMTMDAKKNETGTVPESDKKWWHNAVVYQIYPHSFMDANHDGIGDLAGIISKLDYLKQLGINVIWLSPVFKSPMDDN
GYDISDYQDIASEFGTLEEMNKLIAEAAKRDIRIIMDLVINHSSDEHPWFIESRKSKDNFYRDYYIWREPKADGSAPNDF
KSYFGGSAWEFDGTTGQYYFHQFSKKQPDLNWDNPKVQEEVHKMINWWLDRGIGGFRMDVIDLIGKDVDKQIMTNGPRLH
PLLQEMNKATFGGRDLLTVGEAWSATPETAKLYSDPARDELSMVFQFEHITITFDPEQGKWKPRPFDLLEFKQVISKWQT
ELADCGWNSLFWNNHDLPRAVSKYGDPGCYRVQSAKMLATALHFLKGIPYIYQGEEIGMTNVHFDAIEDYQDIETLNLYQ
ERIAAGVSHEDMMQGIHENGRDNARTPMQWDSSLNSGFSDGNPWLKLNPNYTEINVESALDDPDSIFYHYQKLVQLRKTH
EVMVYGDYQPLFVEHKKVFSYQRQLGNEKVIVINNFTNEPLELTLPKPLQGLKGQCLISNYAPRKQLSESLALAPYESFA
LLIKPC

Sequences:

>Translated_566_residues
MTIVMTMDAKKNETGTVPESDKKWWHNAVVYQIYPHSFMDANHDGIGDLAGIISKLDYLKQLGINVIWLSPVFKSPMDDN
GYDISDYQDIASEFGTLEEMNKLIAEAAKRDIRIIMDLVINHSSDEHPWFIESRKSKDNFYRDYYIWREPKADGSAPNDF
KSYFGGSAWEFDGTTGQYYFHQFSKKQPDLNWDNPKVQEEVHKMINWWLDRGIGGFRMDVIDLIGKDVDKQIMTNGPRLH
PLLQEMNKATFGGRDLLTVGEAWSATPETAKLYSDPARDELSMVFQFEHITITFDPEQGKWKPRPFDLLEFKQVISKWQT
ELADCGWNSLFWNNHDLPRAVSKYGDPGCYRVQSAKMLATALHFLKGIPYIYQGEEIGMTNVHFDAIEDYQDIETLNLYQ
ERIAAGVSHEDMMQGIHENGRDNARTPMQWDSSLNSGFSDGNPWLKLNPNYTEINVESALDDPDSIFYHYQKLVQLRKTH
EVMVYGDYQPLFVEHKKVFSYQRQLGNEKVIVINNFTNEPLELTLPKPLQGLKGQCLISNYAPRKQLSESLALAPYESFA
LLIKPC
>Mature_565_residues
TIVMTMDAKKNETGTVPESDKKWWHNAVVYQIYPHSFMDANHDGIGDLAGIISKLDYLKQLGINVIWLSPVFKSPMDDNG
YDISDYQDIASEFGTLEEMNKLIAEAAKRDIRIIMDLVINHSSDEHPWFIESRKSKDNFYRDYYIWREPKADGSAPNDFK
SYFGGSAWEFDGTTGQYYFHQFSKKQPDLNWDNPKVQEEVHKMINWWLDRGIGGFRMDVIDLIGKDVDKQIMTNGPRLHP
LLQEMNKATFGGRDLLTVGEAWSATPETAKLYSDPARDELSMVFQFEHITITFDPEQGKWKPRPFDLLEFKQVISKWQTE
LADCGWNSLFWNNHDLPRAVSKYGDPGCYRVQSAKMLATALHFLKGIPYIYQGEEIGMTNVHFDAIEDYQDIETLNLYQE
RIAAGVSHEDMMQGIHENGRDNARTPMQWDSSLNSGFSDGNPWLKLNPNYTEINVESALDDPDSIFYHYQKLVQLRKTHE
VMVYGDYQPLFVEHKKVFSYQRQLGNEKVIVINNFTNEPLELTLPKPLQGLKGQCLISNYAPRKQLSESLALAPYESFAL
LIKPC

Specific function: The physiological substrates may be short isomaltosaccharides [H]

COG id: COG0366

COG function: function code G; Glycosidases

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 13 family [H]

Homologues:

Organism=Homo sapiens, GI187423904, Length=550, Percent_Identity=30.3636363636364, Blast_Score=239, Evalue=4e-63,
Organism=Homo sapiens, GI65506891, Length=149, Percent_Identity=29.5302013422819, Blast_Score=70, Evalue=5e-12,
Organism=Homo sapiens, GI61744475, Length=134, Percent_Identity=31.3432835820896, Blast_Score=70, Evalue=5e-12,
Organism=Homo sapiens, GI61744479, Length=134, Percent_Identity=31.3432835820896, Blast_Score=70, Evalue=5e-12,
Organism=Homo sapiens, GI61744477, Length=134, Percent_Identity=31.3432835820896, Blast_Score=70, Evalue=5e-12,
Organism=Homo sapiens, GI61744483, Length=149, Percent_Identity=29.5302013422819, Blast_Score=70, Evalue=6e-12,
Organism=Homo sapiens, GI61744481, Length=149, Percent_Identity=29.5302013422819, Blast_Score=70, Evalue=6e-12,
Organism=Escherichia coli, GI1790687, Length=552, Percent_Identity=42.9347826086957, Blast_Score=481, Evalue=1e-137,
Organism=Escherichia coli, GI1786604, Length=465, Percent_Identity=21.7204301075269, Blast_Score=75, Evalue=1e-14,
Organism=Escherichia coli, GI1789995, Length=147, Percent_Identity=29.9319727891156, Blast_Score=65, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI32565753, Length=229, Percent_Identity=30.1310043668122, Blast_Score=120, Evalue=2e-27,
Organism=Caenorhabditis elegans, GI25147709, Length=491, Percent_Identity=23.2179226069246, Blast_Score=109, Evalue=5e-24,
Organism=Saccharomyces cerevisiae, GI6321726, Length=579, Percent_Identity=38.6873920552677, Blast_Score=386, Evalue=1e-108,
Organism=Saccharomyces cerevisiae, GI6322241, Length=580, Percent_Identity=38.448275862069, Blast_Score=378, Evalue=1e-105,
Organism=Saccharomyces cerevisiae, GI6322021, Length=580, Percent_Identity=38.448275862069, Blast_Score=378, Evalue=1e-105,
Organism=Saccharomyces cerevisiae, GI6324416, Length=580, Percent_Identity=38.6206896551724, Blast_Score=377, Evalue=1e-105,
Organism=Saccharomyces cerevisiae, GI6322245, Length=580, Percent_Identity=36.2068965517241, Blast_Score=369, Evalue=1e-103,
Organism=Saccharomyces cerevisiae, GI6321731, Length=585, Percent_Identity=37.2649572649573, Blast_Score=350, Evalue=3e-97,
Organism=Saccharomyces cerevisiae, GI6319776, Length=585, Percent_Identity=37.2649572649573, Blast_Score=350, Evalue=5e-97,
Organism=Drosophila melanogaster, GI221330053, Length=514, Percent_Identity=35.408560311284, Blast_Score=293, Evalue=3e-79,
Organism=Drosophila melanogaster, GI24586599, Length=537, Percent_Identity=34.8230912476723, Blast_Score=290, Evalue=1e-78,
Organism=Drosophila melanogaster, GI24583745, Length=584, Percent_Identity=33.0479452054795, Blast_Score=283, Evalue=3e-76,
Organism=Drosophila melanogaster, GI24586597, Length=586, Percent_Identity=33.1058020477816, Blast_Score=278, Evalue=7e-75,
Organism=Drosophila melanogaster, GI24586593, Length=586, Percent_Identity=31.3993174061433, Blast_Score=263, Evalue=3e-70,
Organism=Drosophila melanogaster, GI24583749, Length=524, Percent_Identity=34.7328244274809, Blast_Score=261, Evalue=8e-70,
Organism=Drosophila melanogaster, GI24583747, Length=524, Percent_Identity=34.7328244274809, Blast_Score=261, Evalue=8e-70,
Organism=Drosophila melanogaster, GI24586587, Length=598, Percent_Identity=31.438127090301, Blast_Score=253, Evalue=2e-67,
Organism=Drosophila melanogaster, GI45549022, Length=544, Percent_Identity=31.9852941176471, Blast_Score=252, Evalue=5e-67,
Organism=Drosophila melanogaster, GI24586591, Length=594, Percent_Identity=30.8080808080808, Blast_Score=248, Evalue=1e-65,
Organism=Drosophila melanogaster, GI24586589, Length=582, Percent_Identity=30.7560137457045, Blast_Score=241, Evalue=8e-64,
Organism=Drosophila melanogaster, GI281360393, Length=529, Percent_Identity=28.1663516068053, Blast_Score=185, Evalue=7e-47,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013780
- InterPro:   IPR006047
- InterPro:   IPR006589
- InterPro:   IPR017853
- InterPro:   IPR013781 [H]

Pfam domain/function: PF00128 Alpha-amylase [H]

EC number: =3.2.1.70 [H]

Molecular weight: Translated: 65303; Mature: 65172

Theoretical pI: Translated: 4.99; Mature: 4.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIVMTMDAKKNETGTVPESDKKWWHNAVVYQIYPHSFMDANHDGIGDLAGIISKLDYLK
CEEEEEECCCCCCCCCCCCCCHHHHHCEEEEEECCCHHCCCCCCCHHHHHHHHHHHHHHH
QLGINVIWLSPVFKSPMDDNGYDISDYQDIASEFGTLEEMNKLIAEAAKRDIRIIMDLVI
HCCCEEEEECHHHCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
NHSSDEHPWFIESRKSKDNFYRDYYIWREPKADGSAPNDFKSYFGGSAWEFDGTTGQYYF
CCCCCCCCEEEECCCCCCCCEEEEEEEECCCCCCCCCHHHHHHCCCCEEECCCCCCHHHH
HQFSKKQPDLNWDNPKVQEEVHKMINWWLDRGIGGFRMDVIDLIGKDVDKQIMTNGPRLH
HHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHCCCCCHH
PLLQEMNKATFGGRDLLTVGEAWSATPETAKLYSDPARDELSMVFQFEHITITFDPEQGK
HHHHHHHHHCCCCCCEEEECCCCCCCCCHHHHHCCCCHHHHEEEEEEEEEEEEECCCCCC
WKPRPFDLLEFKQVISKWQTELADCGWNSLFWNNHDLPRAVSKYGDPGCYRVQSAKMLAT
CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCCCEEEEHHHHHHHH
ALHFLKGIPYIYQGEEIGMTNVHFDAIEDYQDIETLNLYQERIAAGVSHEDMMQGIHENG
HHHHHCCCCEEEECCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCC
RDNARTPMQWDSSLNSGFSDGNPWLKLNPNYTEINVESALDDPDSIFYHYQKLVQLRKTH
CCCCCCCCCCCHHHCCCCCCCCCEEEECCCEEEEEHHHCCCCHHHHHHHHHHHHHHHHCC
EVMVYGDYQPLFVEHKKVFSYQRQLGNEKVIVINNFTNEPLELTLPKPLQGLKGQCLISN
EEEEEECCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCEEEECCCCCCCCCCCEEECC
YAPRKQLSESLALAPYESFALLIKPC
CCCHHHHHHHHCCCCCCCEEEEEECC
>Mature Secondary Structure 
TIVMTMDAKKNETGTVPESDKKWWHNAVVYQIYPHSFMDANHDGIGDLAGIISKLDYLK
EEEEEECCCCCCCCCCCCCCHHHHHCEEEEEECCCHHCCCCCCCHHHHHHHHHHHHHHH
QLGINVIWLSPVFKSPMDDNGYDISDYQDIASEFGTLEEMNKLIAEAAKRDIRIIMDLVI
HCCCEEEEECHHHCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
NHSSDEHPWFIESRKSKDNFYRDYYIWREPKADGSAPNDFKSYFGGSAWEFDGTTGQYYF
CCCCCCCCEEEECCCCCCCCEEEEEEEECCCCCCCCCHHHHHHCCCCEEECCCCCCHHHH
HQFSKKQPDLNWDNPKVQEEVHKMINWWLDRGIGGFRMDVIDLIGKDVDKQIMTNGPRLH
HHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHCCCCCHH
PLLQEMNKATFGGRDLLTVGEAWSATPETAKLYSDPARDELSMVFQFEHITITFDPEQGK
HHHHHHHHHCCCCCCEEEECCCCCCCCCHHHHHCCCCHHHHEEEEEEEEEEEEECCCCCC
WKPRPFDLLEFKQVISKWQTELADCGWNSLFWNNHDLPRAVSKYGDPGCYRVQSAKMLAT
CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCCCEEEEHHHHHHHH
ALHFLKGIPYIYQGEEIGMTNVHFDAIEDYQDIETLNLYQERIAAGVSHEDMMQGIHENG
HHHHHCCCCEEEECCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCC
RDNARTPMQWDSSLNSGFSDGNPWLKLNPNYTEINVESALDDPDSIFYHYQKLVQLRKTH
CCCCCCCCCCCHHHCCCCCCCCCEEEECCCEEEEEHHHCCCCHHHHHHHHHHHHHHHHCC
EVMVYGDYQPLFVEHKKVFSYQRQLGNEKVIVINNFTNEPLELTLPKPLQGLKGQCLISN
EEEEEECCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCEEEECCCCCCCCCCCEEECC
YAPRKQLSESLALAPYESFALLIKPC
CCCHHHHHHHHCCCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11463916; 8566758; 8021229; 9466257; 9383201 [H]