| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is 119946027
Identifier: 119946027
GI number: 119946027
Start: 2888795
End: 2889175
Strand: Reverse
Name: 119946027
Synonym: Ping_2371
Alternate gene names: NA
Gene position: 2889175-2888795 (Counterclockwise)
Preceding gene: 119946028
Following gene: 119946026
Centisome position: 63.36
GC content: 45.41
Gene sequence:
>381_bases ATGTTTAGTCATGTAATGCTTGGAACCAATGATATAGAAAAGTCAAAGCTGTTTTACGATGCAGTATTGGCTGCACTTGG ACACAATGAAGGTGTCTTAGACGGCAACGGACGCTGTTTTTATATGACAAAAGCGGGCGTTTTTGCGTTAACACTGCCAA TAAATGGAGAAGCTGCTACCTGTGGCAATGGTATGACTATTGGATTTAAAGCCAATAATCCTGAAGCGGTTGAGGCATTT CATGCGGCAGGCATCGCTAACGGAGGGACCGAGTGCGAACAACCACCTGGGCTGCGCGAAGCGGGTTCTAGAAAACTCTA TTTAGGCTATCTGCGCGATCCATCGGGCAATAAAATTTGTGCTACCCACTTTGTTGCTTAA
Upstream 100 bases:
>100_bases GAAGGTGGGAAGGCTGTCGGCTTTCGGCTGTCAGCTCTAAACTCGAAGCTCGAAGGCTCTAAACTCGAAGACTCGATTAT TTAAATAAAGGAAAATAAGA
Downstream 100 bases:
>100_bases TCTGTTTCCATTTCATTTCGAGATGTATATTGAGAGGTTAGCTGTCAGGTAGCCTCTTTAGCCTTGATTTCGAGTGACCC TTTTTCTTCATACCCCTTTC
Product: hypothetical protein
Products: NA
Alternate protein names: Glyoxalase Family Protein; Lactoylglutathione Lyase; Dioxygenase; Lactoylglutathione Lyase Protein; Lactoylglutathione Lyase-Like Lyase; Glyoxalase-Family Protein; Glyoxalase/Dioxygenase; Glyoxalase/Bleomycin Resistance Dioxygenase; Glyoxalase/Bleomycin Resistance; Glyoxalase Family Protein Family Protein; Dioxygenase-Family Protein; Isocitrate Dehydrogenase
Number of amino acids: Translated: 126; Mature: 126
Protein sequence:
>126_residues MFSHVMLGTNDIEKSKLFYDAVLAALGHNEGVLDGNGRCFYMTKAGVFALTLPINGEAATCGNGMTIGFKANNPEAVEAF HAAGIANGGTECEQPPGLREAGSRKLYLGYLRDPSGNKICATHFVA
Sequences:
>Translated_126_residues MFSHVMLGTNDIEKSKLFYDAVLAALGHNEGVLDGNGRCFYMTKAGVFALTLPINGEAATCGNGMTIGFKANNPEAVEAF HAAGIANGGTECEQPPGLREAGSRKLYLGYLRDPSGNKICATHFVA >Mature_126_residues MFSHVMLGTNDIEKSKLFYDAVLAALGHNEGVLDGNGRCFYMTKAGVFALTLPINGEAATCGNGMTIGFKANNPEAVEAF HAAGIANGGTECEQPPGLREAGSRKLYLGYLRDPSGNKICATHFVA
Specific function: Unknown
COG id: COG0346
COG function: function code E; Lactoylglutathione lyase and related lyases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13283; Mature: 13283
Theoretical pI: Translated: 6.50; Mature: 6.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFSHVMLGTNDIEKSKLFYDAVLAALGHNEGVLDGNGRCFYMTKAGVFALTLPINGEAAT CCCEEEECCCCCCHHHHHHHHHHHHHCCCCCEEECCCCEEEEECCCEEEEEEECCCCEEE CGNGMTIGFKANNPEAVEAFHAAGIANGGTECEQPPGLREAGSRKLYLGYLRDPSGNKIC CCCCCEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCEEE ATHFVA EEEECC >Mature Secondary Structure MFSHVMLGTNDIEKSKLFYDAVLAALGHNEGVLDGNGRCFYMTKAGVFALTLPINGEAAT CCCEEEECCCCCCHHHHHHHHHHHHHCCCCCEEECCCCEEEEECCCEEEEEEECCCCEEE CGNGMTIGFKANNPEAVEAFHAAGIANGGTECEQPPGLREAGSRKLYLGYLRDPSGNKIC CCCCCEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCEEE ATHFVA EEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA