| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
Click here to switch to the map view.
The map label for this gene is 119945987
Identifier: 119945987
GI number: 119945987
Start: 2829603
End: 2830610
Strand: Direct
Name: 119945987
Synonym: Ping_2328
Alternate gene names: NA
Gene position: 2829603-2830610 (Clockwise)
Preceding gene: 119945986
Following gene: 119945990
Centisome position: 62.06
GC content: 36.21
Gene sequence:
>1008_bases ATGACACCTATATTTATGATTGGAACTCAACGATCTGGCTCAAATTTATTAAGACTAATGCTAAATCAGCTGAGCGATAT AGCTTCTCCACATCCACCACATATATTAGAGCGCATGTTTCCTTTGGTTGAATCTTATGGAGATTTGGATCTTGATGTTA ACTATAAAAAATTAATTGATGACATTTGTAGACTGGTGGAGCTAAACCCCGTCGAATGGAGCGGAATTACTTTTGATCGA AGTAAAATAAAATCACATGCCACAGGCAGGTCACTGCTCGGTGTTTATGCCGCAATTCATGATCTTTACACTGAAAGTCA AGGTGCTAAAACATGGTGCTGTAAAAGTCTCGCTAATATAAAGTACATAAACCAAATTGAAGAACACTTTGAAAACCCTA AATATATTTACTTATATCGAGATGGCCGCGATGTCGCTTTATCATTTCAAAAGGCAGTTGTAGGTGAAAAGCACATTTAT AACATTGCAACTGGCTGGTCAAAAACACAAAAAATTGCCTTAGACTTTAAAAAACTAATTGATAAAAAACGTTTTTTCTG TATTAGTTATGAGGAACTCACGCAAGGCCCCGAAAAAATCGCTAGGTCTCTTTGTGAATTTTTAGGTGTAGAGTACGTCC CTGAAATTCTTGAGTTCCATAAAAGTAATGAAGCTAAAAACGCAGCCAAATCTAGCGAGTTATGGGGCAATGTCACTAGC CCGATCATAACAAATAACAGCAGGAAATTTCTGGCAGAAATGTCACCAGCTAACATTGAAATTTTTGAATCCGTTTCTGG AAATATATTAGACGAACTAGGCTACGAGAGATGCAGAATTGTTCTCGGTGAAGAAAAAATATTTTCACACGACGAAATTG ATAGCTTCAATAGTTTAAATACAAAAATGAAGCAGGAAAAAATGTCACAGGTTGATGAAAAAGACAAGCAGCGCCGTGAA CGTCAAACTGAATTATTAAAAGAAATTAAAAATAGACCGATCGCATAG
Upstream 100 bases:
>100_bases ACAGGGCTACTTGCTTTTACATGATTTTTTAAGCTAAACACTCTTATAAATAATATTTTTACTTATTTTAATACCTTTTT AAAACACTAGGGAAAAAATT
Downstream 100 bases:
>100_bases TTTGAACTCAACACCCACCGACTAAAGTAGGTGGGTTTACGGATTTAAGACCCTATTTTTTAGTTATCAGTTTTAAAATA ATAATCAACTTTAGGCTCAA
Product: sulfotransferase
Products: NA
Alternate protein names: Sulfotransferase Domain-Containing Protein; Sulfotransferase Domain Superfamily; Protein-Tyrosine Sulfotransferase; Sulfotransferase Domain Protein; Beta-Ketoacyl Synthase
Number of amino acids: Translated: 335; Mature: 334
Protein sequence:
>335_residues MTPIFMIGTQRSGSNLLRLMLNQLSDIASPHPPHILERMFPLVESYGDLDLDVNYKKLIDDICRLVELNPVEWSGITFDR SKIKSHATGRSLLGVYAAIHDLYTESQGAKTWCCKSLANIKYINQIEEHFENPKYIYLYRDGRDVALSFQKAVVGEKHIY NIATGWSKTQKIALDFKKLIDKKRFFCISYEELTQGPEKIARSLCEFLGVEYVPEILEFHKSNEAKNAAKSSELWGNVTS PIITNNSRKFLAEMSPANIEIFESVSGNILDELGYERCRIVLGEEKIFSHDEIDSFNSLNTKMKQEKMSQVDEKDKQRRE RQTELLKEIKNRPIA
Sequences:
>Translated_335_residues MTPIFMIGTQRSGSNLLRLMLNQLSDIASPHPPHILERMFPLVESYGDLDLDVNYKKLIDDICRLVELNPVEWSGITFDR SKIKSHATGRSLLGVYAAIHDLYTESQGAKTWCCKSLANIKYINQIEEHFENPKYIYLYRDGRDVALSFQKAVVGEKHIY NIATGWSKTQKIALDFKKLIDKKRFFCISYEELTQGPEKIARSLCEFLGVEYVPEILEFHKSNEAKNAAKSSELWGNVTS PIITNNSRKFLAEMSPANIEIFESVSGNILDELGYERCRIVLGEEKIFSHDEIDSFNSLNTKMKQEKMSQVDEKDKQRRE RQTELLKEIKNRPIA >Mature_334_residues TPIFMIGTQRSGSNLLRLMLNQLSDIASPHPPHILERMFPLVESYGDLDLDVNYKKLIDDICRLVELNPVEWSGITFDRS KIKSHATGRSLLGVYAAIHDLYTESQGAKTWCCKSLANIKYINQIEEHFENPKYIYLYRDGRDVALSFQKAVVGEKHIYN IATGWSKTQKIALDFKKLIDKKRFFCISYEELTQGPEKIARSLCEFLGVEYVPEILEFHKSNEAKNAAKSSELWGNVTSP IITNNSRKFLAEMSPANIEIFESVSGNILDELGYERCRIVLGEEKIFSHDEIDSFNSLNTKMKQEKMSQVDEKDKQRRER QTELLKEIKNRPIA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38567; Mature: 38435
Theoretical pI: Translated: 6.94; Mature: 6.94
Prosite motif: PS00237 G_PROTEIN_RECEP_F1_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPIFMIGTQRSGSNLLRLMLNQLSDIASPHPPHILERMFPLVESYGDLDLDVNYKKLID CCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHH DICRLVELNPVEWSGITFDRSKIKSHATGRSLLGVYAAIHDLYTESQGAKTWCCKSLANI HHHHHHCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH KYINQIEEHFENPKYIYLYRDGRDVALSFQKAVVGEKHIYNIATGWSKTQKIALDFKKLI HHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHCCHHHEEHHCCCCHHHHHHHHHHHHH DKKRFFCISYEELTQGPEKIARSLCEFLGVEYVPEILEFHKSNEAKNAAKSSELWGNVTS HHHHEEEEEHHHHHCCHHHHHHHHHHHHCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCC PIITNNSRKFLAEMSPANIEIFESVSGNILDELGYERCRIVLGEEKIFSHDEIDSFNSLN CEEECCCHHHHHHCCCCCEEHHHHHCCHHHHHCCHHHHEEEECCHHHCCCCCCCCHHHHH TKMKQEKMSQVDEKDKQRRERQTELLKEIKNRPIA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure TPIFMIGTQRSGSNLLRLMLNQLSDIASPHPPHILERMFPLVESYGDLDLDVNYKKLID CCEEEEECCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHH DICRLVELNPVEWSGITFDRSKIKSHATGRSLLGVYAAIHDLYTESQGAKTWCCKSLANI HHHHHHCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH KYINQIEEHFENPKYIYLYRDGRDVALSFQKAVVGEKHIYNIATGWSKTQKIALDFKKLI HHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHCCHHHEEHHCCCCHHHHHHHHHHHHH DKKRFFCISYEELTQGPEKIARSLCEFLGVEYVPEILEFHKSNEAKNAAKSSELWGNVTS HHHHEEEEEHHHHHCCHHHHHHHHHHHHCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCC PIITNNSRKFLAEMSPANIEIFESVSGNILDELGYERCRIVLGEEKIFSHDEIDSFNSLN CEEECCCHHHHHHCCCCCEEHHHHHCCHHHHHCCHHHHEEEECCHHHCCCCCCCCHHHHH TKMKQEKMSQVDEKDKQRRERQTELLKEIKNRPIA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA