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The map label for this gene is yebS [H]

Identifier: 119945881

GI number: 119945881

Start: 2703033

End: 2703629

Strand: Direct

Name: yebS [H]

Synonym: Ping_2221

Alternate gene names: 119945881

Gene position: 2703033-2703629 (Clockwise)

Preceding gene: 119945869

Following gene: 119945882

Centisome position: 59.28

GC content: 39.2

Gene sequence:

>597_bases
ATGAAAACAATAATCTGCCGGCATTGTGATATGGTTTCAAATGTTTCCCGCGTGCCTGTAAACTACGTGGCTAAATGCTG
CCGTTGCGGGGGTCCAATATATAAAAATACCAAGTGCAGGCCGTCGGTGTTGCTTGCTCTCTCTTTAACCGCATTACTGG
TAATAGTCCCGGCTTTTTATTTCCCGTTAATTTCAGTCAATTTACTGGGGATTACTGAGGACACAAATTTATTGCAGGGC
GCGTTAATGATGCTTGATAATGCACCCGTTGTATCCGCTGCCGTGTTATTTTGTGCTGTCATAGCCCCCACATTATTACT
TTCATGTATTGCCTTTAGCAGTGCATGCTTAACCTATAATTACTTCCCAACCTATATGCCAAAAGTGTTATATATCACGC
ACTCTTTGATTCATTGGTCAATGCTGGAGGTCTATATGATTAGCTTAATAGTCGCTATTTTTAAATTGATGAATTATGCA
GATTTATATTTTGGCTCTGGTGTCTATTTTTTTATTACCCTGCTGCTACTTGATATGACGATTATCAGTAATTATAGCAA
TCATGCTTATTGGGAGCGTTATATCAATGGCAAGTAA

Upstream 100 bases:

>100_bases
TTATACAGTACTAAAATCACGCTAAGATTGCAAATTTTTGTTAAATACACGTTTGTTTGCTATCTTTCCCATTAACTAAA
TAATAATATGAATTTATTCA

Downstream 100 bases:

>100_bases
TCCAATAGCAGGACAAACAGGTTTTAAACAGGGGCTGCAACTTTGTAAAGTTTGCGGAAATCACTCGCCCTATAAAACAG
AGCAGACCCGCTGCCCTGTC

Product: paraquat-inducible protein A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 198; Mature: 198

Protein sequence:

>198_residues
MKTIICRHCDMVSNVSRVPVNYVAKCCRCGGPIYKNTKCRPSVLLALSLTALLVIVPAFYFPLISVNLLGITEDTNLLQG
ALMMLDNAPVVSAAVLFCAVIAPTLLLSCIAFSSACLTYNYFPTYMPKVLYITHSLIHWSMLEVYMISLIVAIFKLMNYA
DLYFGSGVYFFITLLLLDMTIISNYSNHAYWERYINGK

Sequences:

>Translated_198_residues
MKTIICRHCDMVSNVSRVPVNYVAKCCRCGGPIYKNTKCRPSVLLALSLTALLVIVPAFYFPLISVNLLGITEDTNLLQG
ALMMLDNAPVVSAAVLFCAVIAPTLLLSCIAFSSACLTYNYFPTYMPKVLYITHSLIHWSMLEVYMISLIVAIFKLMNYA
DLYFGSGVYFFITLLLLDMTIISNYSNHAYWERYINGK
>Mature_198_residues
MKTIICRHCDMVSNVSRVPVNYVAKCCRCGGPIYKNTKCRPSVLLALSLTALLVIVPAFYFPLISVNLLGITEDTNLLQG
ALMMLDNAPVVSAAVLFCAVIAPTLLLSCIAFSSACLTYNYFPTYMPKVLYITHSLIHWSMLEVYMISLIVAIFKLMNYA
DLYFGSGVYFFITLLLLDMTIISNYSNHAYWERYINGK

Specific function: Unknown

COG id: COG2995

COG function: function code S; Uncharacterized paraquat-inducible protein A

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pqiA family [H]

Homologues:

Organism=Escherichia coli, GI1788137, Length=190, Percent_Identity=29.4736842105263, Blast_Score=96, Evalue=1e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005219
- InterPro:   IPR011031
- InterPro:   IPR007498 [H]

Pfam domain/function: PF04403 PqiA [H]

EC number: NA

Molecular weight: Translated: 22217; Mature: 22217

Theoretical pI: Translated: 8.30; Mature: 8.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.5 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
9.1 %Cys+Met (Translated Protein)
4.5 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
9.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTIICRHCDMVSNVSRVPVNYVAKCCRCGGPIYKNTKCRPSVLLALSLTALLVIVPAFY
CCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
FPLISVNLLGITEDTNLLQGALMMLDNAPVVSAAVLFCAVIAPTLLLSCIAFSSACLTYN
HHHHHHHHEEECCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEC
YFPTYMPKVLYITHSLIHWSMLEVYMISLIVAIFKLMNYADLYFGSGVYFFITLLLLDMT
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
IISNYSNHAYWERYINGK
HHHCCCCHHHHHHHCCCC
>Mature Secondary Structure
MKTIICRHCDMVSNVSRVPVNYVAKCCRCGGPIYKNTKCRPSVLLALSLTALLVIVPAFY
CCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
FPLISVNLLGITEDTNLLQGALMMLDNAPVVSAAVLFCAVIAPTLLLSCIAFSSACLTYN
HHHHHHHHEEECCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEC
YFPTYMPKVLYITHSLIHWSMLEVYMISLIVAIFKLMNYADLYFGSGVYFFITLLLLDMT
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
IISNYSNHAYWERYINGK
HHHCCCCHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]