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The map label for this gene is napC [H]

Identifier: 119945832

GI number: 119945832

Start: 2646903

End: 2647478

Strand: Reverse

Name: napC [H]

Synonym: Ping_2172

Alternate gene names: 119945832

Gene position: 2647478-2646903 (Counterclockwise)

Preceding gene: 119945833

Following gene: 119945831

Centisome position: 58.06

GC content: 43.4

Gene sequence:

>576_bases
ATGCTAAATTTATTGAAACGGTTATGGACCATTATGAAATCACCCTCTTCTGCCGCGATGGGATTTATCCTGTTGATTGG
TTTTTTAGGCGGGGTGATTTTCTGGGGTGGTTTTAATACGGGCATGGAGGCGACTAATACGGAAGCATTTTGTTCAAGTT
GTCATGCGCCCATTGTCAAAGAAATCAAAGAAACTATCCACTACGCTAACCGTTCAGGCGTACGTGCAATTTGTTCCGAC
TGTCATGTGCCGCATAACTGGACTGACAAAATTATCCGTAAAGTTCAAGCATCTAAAGAGTTAGTCGCTTTTGCCATGGG
AACCATTGATACTGAAGAAAAATTTCGAGCTAGAAGGGGTTACTTGGCAAATCGTGAATGGCATCGAATGAAAGAAAACG
ACTCTCAAGAATGTCGGAACTGCCATGAATTTGATTTTATGGATTTCAGTGAACAAGGTACTCGCAGCAGAAAACCACAC
TCTACGGCCCTGGCGTCTGGCGAAAAAACCTGTGTTGACTGCCATAAAGGTATTGCCCACAGACTACCAAATATGGAGGG
CATAGAAGGGTGGTAA

Upstream 100 bases:

>100_bases
CTGCTTACAATGCCATGTTACTCAAGCAGATGCTAGACCCTTGGTGGGAAATACTTTCCGACCCGTTGACTCGCTACAGT
AAGTTAGGAGCAAACTACTT

Downstream 100 bases:

>100_bases
TCAAGTTATATTTCTGATTTTTATGGGAGTATACTACAGGACCCGTAAAAGAGCATTTATGCTCTTTTTTTTTGGCTGGT
GGATATGATAGATTGAAAAT

Product: nitrate reductase periplasmic cytochrome c-type protein NapC

Products: reduced acceptor; NO3- [C]

Alternate protein names: NA

Number of amino acids: Translated: 191; Mature: 191

Protein sequence:

>191_residues
MLNLLKRLWTIMKSPSSAAMGFILLIGFLGGVIFWGGFNTGMEATNTEAFCSSCHAPIVKEIKETIHYANRSGVRAICSD
CHVPHNWTDKIIRKVQASKELVAFAMGTIDTEEKFRARRGYLANREWHRMKENDSQECRNCHEFDFMDFSEQGTRSRKPH
STALASGEKTCVDCHKGIAHRLPNMEGIEGW

Sequences:

>Translated_191_residues
MLNLLKRLWTIMKSPSSAAMGFILLIGFLGGVIFWGGFNTGMEATNTEAFCSSCHAPIVKEIKETIHYANRSGVRAICSD
CHVPHNWTDKIIRKVQASKELVAFAMGTIDTEEKFRARRGYLANREWHRMKENDSQECRNCHEFDFMDFSEQGTRSRKPH
STALASGEKTCVDCHKGIAHRLPNMEGIEGW
>Mature_191_residues
MLNLLKRLWTIMKSPSSAAMGFILLIGFLGGVIFWGGFNTGMEATNTEAFCSSCHAPIVKEIKETIHYANRSGVRAICSD
CHVPHNWTDKIIRKVQASKELVAFAMGTIDTEEKFRARRGYLANREWHRMKENDSQECRNCHEFDFMDFSEQGTRSRKPH
STALASGEKTCVDCHKGIAHRLPNMEGIEGW

Specific function: Mediates electron flow from quinones to the NapAB complex [H]

COG id: COG3005

COG function: function code C; Nitrate/TMAO reductases, membrane-bound tetraheme cytochrome c subunit

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788530, Length=189, Percent_Identity=55.5555555555556, Blast_Score=229, Evalue=6e-62,
Organism=Escherichia coli, GI1787230, Length=185, Percent_Identity=41.0810810810811, Blast_Score=158, Evalue=2e-40,
Organism=Escherichia coli, GI1788181, Length=148, Percent_Identity=41.2162162162162, Blast_Score=128, Evalue=3e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011031
- InterPro:   IPR005126
- InterPro:   IPR011885 [H]

Pfam domain/function: PF03264 Cytochrom_NNT [H]

EC number: NA

Molecular weight: Translated: 21640; Mature: 21640

Theoretical pI: Translated: 8.23; Mature: 8.23

Prosite motif: PS51008 MULTIHEME_CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.2 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
8.4 %Cys+Met (Translated Protein)
4.2 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
8.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNLLKRLWTIMKSPSSAAMGFILLIGFLGGVIFWGGFNTGMEATNTEAFCSSCHAPIVK
CHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCHHHH
EIKETIHYANRSGVRAICSDCHVPHNWTDKIIRKVQASKELVAFAMGTIDTEEKFRARRG
HHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHC
YLANREWHRMKENDSQECRNCHEFDFMDFSEQGTRSRKPHSTALASGEKTCVDCHKGIAH
CCCCHHHHHHCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHH
RLPNMEGIEGW
HCCCCCCCCCC
>Mature Secondary Structure
MLNLLKRLWTIMKSPSSAAMGFILLIGFLGGVIFWGGFNTGMEATNTEAFCSSCHAPIVK
CHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCHHHH
EIKETIHYANRSGVRAICSDCHVPHNWTDKIIRKVQASKELVAFAMGTIDTEEKFRARRG
HHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHC
YLANREWHRMKENDSQECRNCHEFDFMDFSEQGTRSRKPHSTALASGEKTCVDCHKGIAH
CCCCHHHHHHCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHH
RLPNMEGIEGW
HCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Acceptor; nitrite [C]

Specific reaction: Acceptor + nitrite = reduced acceptor + NO3- [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]