| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is 119945773
Identifier: 119945773
GI number: 119945773
Start: 2567516
End: 2567926
Strand: Direct
Name: 119945773
Synonym: Ping_2108
Alternate gene names: NA
Gene position: 2567516-2567926 (Clockwise)
Preceding gene: 119945771
Following gene: 119945774
Centisome position: 56.31
GC content: 43.07
Gene sequence:
>411_bases ATGCTAACGATTTTTTACGATGGAAACTGCCCGCTGTGCTCTATGGAAATGAAAGAATTACGCCGCTATGACCAGCACAA CAATATCCAACTGGAGGACATTCACCAAAGCGATTTTGAACAAAAATTTCCTGATATCGACAAGATCAAGGCAACTAACA TACTGCATGGGAAGTTGAATGGCACCCCCCTATTTGGACTCGATGTGACCTGTCATGCATGGCGACTGGTGGGTAAAAAA CCCTGGATTGCCGCGCTGCGCTTTCCTATTATCAAACCCGTTGCCGATTGGGCATACCTGTTATTTGCCAAACACCGAAT ACGTATTTCAAAATTATTAATGGGGAATAAAAGCTGTGAAAATGGCCAGTGCAGTATAAAAACCGCAGATAACACCCAGG AGAAAAAATAA
Upstream 100 bases:
>100_bases AAATATCAAATTAATCGCGAGATAAAGAAACAAAAAGATCTAACAACAGCATTGATACGTATATTGAATATAAGAATAAT TTAAGTCTCTGAGGTTTATA
Downstream 100 bases:
>100_bases TGACCGATGTTAAACGTTGCGCTCTAGTTATCGGCGCAAGCAGTGCCATCGCACAAGCGCTGATTGATAATCTTCTGTTA GATGATGAACTGCAGGTTTA
Product: putative thiol-disulphide oxidoreductase DCC
Products: NA
Alternate protein names: Potential Redox Protein; Thiol-Disulfide Oxidoreductase DCC; Inhibitor; Redox Protein
Number of amino acids: Translated: 136; Mature: 136
Protein sequence:
>136_residues MLTIFYDGNCPLCSMEMKELRRYDQHNNIQLEDIHQSDFEQKFPDIDKIKATNILHGKLNGTPLFGLDVTCHAWRLVGKK PWIAALRFPIIKPVADWAYLLFAKHRIRISKLLMGNKSCENGQCSIKTADNTQEKK
Sequences:
>Translated_136_residues MLTIFYDGNCPLCSMEMKELRRYDQHNNIQLEDIHQSDFEQKFPDIDKIKATNILHGKLNGTPLFGLDVTCHAWRLVGKK PWIAALRFPIIKPVADWAYLLFAKHRIRISKLLMGNKSCENGQCSIKTADNTQEKK >Mature_136_residues MLTIFYDGNCPLCSMEMKELRRYDQHNNIQLEDIHQSDFEQKFPDIDKIKATNILHGKLNGTPLFGLDVTCHAWRLVGKK PWIAALRFPIIKPVADWAYLLFAKHRIRISKLLMGNKSCENGQCSIKTADNTQEKK
Specific function: Unknown
COG id: COG3011
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15732; Mature: 15732
Theoretical pI: Translated: 9.02; Mature: 9.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.7 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 3.7 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 6.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTIFYDGNCPLCSMEMKELRRYDQHNNIQLEDIHQSDFEQKFPDIDKIKATNILHGKLN CEEEEECCCCCEEHHHHHHHHHHCCCCCEEEEECCCCHHHHHCCCCCCEEECEEEECCCC GTPLFGLDVTCHAWRLVGKKPWIAALRFPIIKPVADWAYLLFAKHRIRISKLLMGNKSCE CCEEEECCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC NGQCSIKTADNTQEKK CCEEEEEECCCCCCCC >Mature Secondary Structure MLTIFYDGNCPLCSMEMKELRRYDQHNNIQLEDIHQSDFEQKFPDIDKIKATNILHGKLN CEEEEECCCCCEEHHHHHHHHHHCCCCCEEEEECCCCHHHHHCCCCCCEEECEEEECCCC GTPLFGLDVTCHAWRLVGKKPWIAALRFPIIKPVADWAYLLFAKHRIRISKLLMGNKSCE CCEEEECCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC NGQCSIKTADNTQEKK CCEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA