| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is 119945764
Identifier: 119945764
GI number: 119945764
Start: 2552674
End: 2553480
Strand: Direct
Name: 119945764
Synonym: Ping_2097
Alternate gene names: NA
Gene position: 2552674-2553480 (Clockwise)
Preceding gene: 119945763
Following gene: 119945766
Centisome position: 55.98
GC content: 45.11
Gene sequence:
>807_bases ATGCCTAAACCCTTAGCCGACATGTCGGTCACTCAAGCAAGCGCGATTAAATGGTTATTAACTGACGTTGACGATACCCT AACCTGGCAGGGAAAGCTGCCACCCGAAACCCTCATTGCACTGGAGAAACTCACTGCTGTTGGCATAAATGTTGTGGCAA TAACCGGGGCGTCTGCCGGCTGGTGCGATCAAATAGCAAGACTCTGGCCTGTTCATGGCGTGATTGGTGAAAATGGGGCT TTTTGGATGCAGAAAAACGCGACTGGTTTTATCACCAGAGAAAGCATTCCAATCGATACCATGAAGTCTCAGCAAATGGC GCTTATCAAGCATCTTCGACTATTGCTTGAGGACTATCCCGATATCGATTTTGCATGCGATCAGTCTTTTCGCTACTGTG ATGTCGCCATTAACTTAAGCCAGGATCGCCCCCCTGTTGATCAGAAAATCTGTGATGAACTGCTGATAAAAGTTCGTAAT TTGACCGTCGACGGGCAATCCGTCAATGCGACGTTAAGCTCAATTCATCTTAATGTCTGGATAGGCAATCACAATAAGCG CTTATCCGCCGAGCAATATTTATTTGCTCACAATGTCCAGATGAATTTCAATGAGATAGCCTATATCGGTGATTCATTAA ATGATGAAGCCATGTTTGCATGGCTGCCGTTGACCTTTGGAGTGAAAAATATTGAACGGCTGTTACCTCAGTTTGAAACT AAGCCTGCTTATATTACCAATAAAAATGGGGGCTACGGCTTTGCCGAGCTGGCTGATTTTATTTTACAGGCAAAAGAGAG TCGCTAG
Upstream 100 bases:
>100_bases GGACTTGATATTGACCAAAAACATCTGCATTTATTTGATGCAGATACATCAAAACACATTGAGATTGATCTCAAAATGAA CGATCAAAAAGAGCTTCTGT
Downstream 100 bases:
>100_bases CCTTGATCTTTATTATGCAAATTGGTTAATAAAATAAGACCAAACCGATCAGGGAAATATTACGGGTGTCAAATAATTTT GCGGACTTTTAAGTGCTTAA
Product: HAD family hydrolase
Products: NA
Alternate protein names: HAD-Superfamily Hydrolase Subfamily IIB; Hydrolase; Had-Superfamily Hydrolase Subfamily IIb; HAD-Superfamily Hydrolase; Hydrolase Protein; IIB Family HAD Hydrolase; Haloacid Dehalogenase-Like Hydrolase; Archae-Like Hydrolase Family Protein; Hydrolase Of Had Superfamily Protein
Number of amino acids: Translated: 268; Mature: 267
Protein sequence:
>268_residues MPKPLADMSVTQASAIKWLLTDVDDTLTWQGKLPPETLIALEKLTAVGINVVAITGASAGWCDQIARLWPVHGVIGENGA FWMQKNATGFITRESIPIDTMKSQQMALIKHLRLLLEDYPDIDFACDQSFRYCDVAINLSQDRPPVDQKICDELLIKVRN LTVDGQSVNATLSSIHLNVWIGNHNKRLSAEQYLFAHNVQMNFNEIAYIGDSLNDEAMFAWLPLTFGVKNIERLLPQFET KPAYITNKNGGYGFAELADFILQAKESR
Sequences:
>Translated_268_residues MPKPLADMSVTQASAIKWLLTDVDDTLTWQGKLPPETLIALEKLTAVGINVVAITGASAGWCDQIARLWPVHGVIGENGA FWMQKNATGFITRESIPIDTMKSQQMALIKHLRLLLEDYPDIDFACDQSFRYCDVAINLSQDRPPVDQKICDELLIKVRN LTVDGQSVNATLSSIHLNVWIGNHNKRLSAEQYLFAHNVQMNFNEIAYIGDSLNDEAMFAWLPLTFGVKNIERLLPQFET KPAYITNKNGGYGFAELADFILQAKESR >Mature_267_residues PKPLADMSVTQASAIKWLLTDVDDTLTWQGKLPPETLIALEKLTAVGINVVAITGASAGWCDQIARLWPVHGVIGENGAF WMQKNATGFITRESIPIDTMKSQQMALIKHLRLLLEDYPDIDFACDQSFRYCDVAINLSQDRPPVDQKICDELLIKVRNL TVDGQSVNATLSSIHLNVWIGNHNKRLSAEQYLFAHNVQMNFNEIAYIGDSLNDEAMFAWLPLTFGVKNIERLLPQFETK PAYITNKNGGYGFAELADFILQAKESR
Specific function: Unknown
COG id: COG0561
COG function: function code R; Predicted hydrolases of the HAD superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30027; Mature: 29896
Theoretical pI: Translated: 4.95; Mature: 4.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKPLADMSVTQASAIKWLLTDVDDTLTWQGKLPPETLIALEKLTAVGINVVAITGASAG CCCCCCCCHHHHHHHHHHHEECCCCCEEECCCCCHHHHHHHHHHHHCCEEEEEEECCCCH WCDQIARLWPVHGVIGENGAFWMQKNATGFITRESIPIDTMKSQQMALIKHLRLLLEDYP HHHHHHHHCCCCEEECCCCEEEEECCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCC DIDFACDQSFRYCDVAINLSQDRPPVDQKICDELLIKVRNLTVDGQSVNATLSSIHLNVW CCCEEECCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHEEECCCCCCEEEEEEEEEEE IGNHNKRLSAEQYLFAHNVQMNFNEIAYIGDSLNDEAMFAWLPLTFGVKNIERLLPQFET ECCCCCCCCHHHEEEEECCEECCCEEEEECCCCCCCEEEEEEEHHHCHHHHHHHHHHCCC KPAYITNKNGGYGFAELADFILQAKESR CCCEEECCCCCCCHHHHHHHHHHHCCCC >Mature Secondary Structure PKPLADMSVTQASAIKWLLTDVDDTLTWQGKLPPETLIALEKLTAVGINVVAITGASAG CCCCCCCHHHHHHHHHHHEECCCCCEEECCCCCHHHHHHHHHHHHCCEEEEEEECCCCH WCDQIARLWPVHGVIGENGAFWMQKNATGFITRESIPIDTMKSQQMALIKHLRLLLEDYP HHHHHHHHCCCCEEECCCCEEEEECCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCC DIDFACDQSFRYCDVAINLSQDRPPVDQKICDELLIKVRNLTVDGQSVNATLSSIHLNVW CCCEEECCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHEEECCCCCCEEEEEEEEEEE IGNHNKRLSAEQYLFAHNVQMNFNEIAYIGDSLNDEAMFAWLPLTFGVKNIERLLPQFET ECCCCCCCCHHHEEEEECCEECCCEEEEECCCCCCCEEEEEEEHHHCHHHHHHHHHHCCC KPAYITNKNGGYGFAELADFILQAKESR CCCEEECCCCCCCHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA