Click here to switch to the map view.

The map label for this gene is 119945746

Identifier: 119945746

GI number: 119945746

Start: 2526372

End: 2527589

Strand: Direct

Name: 119945746

Synonym: Ping_2076

Alternate gene names: NA

Gene position: 2526372-2527589 (Clockwise)

Preceding gene: 119945745

Following gene: 119945747

Centisome position: 55.41

GC content: 38.92

Gene sequence:

>1218_bases
ATGACTACTTGGTTATCAATAGGCATATTATTTACCTTTGCCGCCATTGCCTTTGTTATTTACCGTTGGGGTAATATGAA
GTGTATCGGTGTTACCCCTGTTCGTAAGTTTACCTTTATCGCTATTCTCTTTACCTCGGGTTTAGATGTCGGATTAATCA
TGTTTCCGCTAACCGAATTTGCAGGCTATGCGGATTTGGTCAGCAGCCCTGAATATGGTTTCAGTAATCCCTTAGCCATT
GAGTTTGGTTTTTGGGCTTTCCTTATTTGGGCATTCTATTTCTTAACCTGTTTCTACTTTTGCATTATTGAACCGAGAGT
TAAATTTTTCGAAATTCCGTTAATTAAATGTATTAATAACGTTGTCATTATTGGTACATGTGCCTTTACGGCGTACTTGT
TATTGATTAATCTGCCCTGGTATTTACCTGATTTAGGTAATGGTGAAGGCATTGTCGGCAGTTTTTACTTAATTGTATTT
CTGGTGATTGCCGCAGCTGTCTATTCAAGTACCAATATTCGTTACGTCAGAATTTTAAGTTTGGTCAGTACCTGGTTATT
TTTAGGCTTAATCGCATTAATGTGGGCAGGTGCCTTTTTATCTGAGAGATCAAGTGTTGGTGAGTTTTTTACTACCTTCG
CTTTATTAGGCGACTACTTCGCCAATCTGCACAACTTTGTATTGCCGATTAATGATTATCATGAATTTTACTTATTTTGG
TGGTTTGCCTGGAGTATTATGATTGGTCAATTTACCGCACGTTTTGTCAGTGGAATGAGAACCTATCAGGTATTACTTGC
CATGATGGTATTCCCGTCTATCCCAATTGCAATCTGGTTTACCGTCCTTTATTACTACAGCGCTAATGCTATTCCAACCG
CTGGCTTATATAATCTTGCAATGGTGATAGTGGGAGTGACATTTGTGATCAACTCACTTGATTCACTGGTTCGGCTCTAT
ACCGACAACTTAAATCTGACCGTACAGCGTTTTGGTAAAGCGCGTTATATTATCGGTAACATAACGCTAATAAGCAGCTT
GACACTGTTGTTCAAATTAGACTTTTTGCAAATCCAGTGGGTTGGCGCATTGGCAATCGCATTAATTTTAGGGTGCTTCG
CTTATATCCTGAAGAATCACTCTCGTACGGTTGCCGATATTGATCGTTCACCGATCGAAAACAAAATCGACTTTACTAAG
ATTGAACTTGCAAATTGA

Upstream 100 bases:

>100_bases
TAACTATCGTTAGTACGATACTTAAGGCTTGAGGACGCAAATAAAATATAAAAAAGGAGTTAACTATGTTTGTTAACAAG
TTCCACTCGGTGGTCAAATA

Downstream 100 bases:

>100_bases
TTATAAAGTTAACAAAATCGGTGCTTCCAGTATAACAACACTGTAGTTTATAAGCCCCCTTTGGTAAAAAAGCAGAATAG
TGCCCTTTCGTTATAAGCAC

Product: putative transporter, BCCT family protein

Products: NA

Alternate protein names: QuateRNAry Ammonium Permease; BCCT Family Transporter; Choline-Glycine Betaine Transporter-Like Protein

Number of amino acids: Translated: 405; Mature: 404

Protein sequence:

>405_residues
MTTWLSIGILFTFAAIAFVIYRWGNMKCIGVTPVRKFTFIAILFTSGLDVGLIMFPLTEFAGYADLVSSPEYGFSNPLAI
EFGFWAFLIWAFYFLTCFYFCIIEPRVKFFEIPLIKCINNVVIIGTCAFTAYLLLINLPWYLPDLGNGEGIVGSFYLIVF
LVIAAAVYSSTNIRYVRILSLVSTWLFLGLIALMWAGAFLSERSSVGEFFTTFALLGDYFANLHNFVLPINDYHEFYLFW
WFAWSIMIGQFTARFVSGMRTYQVLLAMMVFPSIPIAIWFTVLYYYSANAIPTAGLYNLAMVIVGVTFVINSLDSLVRLY
TDNLNLTVQRFGKARYIIGNITLISSLTLLFKLDFLQIQWVGALAIALILGCFAYILKNHSRTVADIDRSPIENKIDFTK
IELAN

Sequences:

>Translated_405_residues
MTTWLSIGILFTFAAIAFVIYRWGNMKCIGVTPVRKFTFIAILFTSGLDVGLIMFPLTEFAGYADLVSSPEYGFSNPLAI
EFGFWAFLIWAFYFLTCFYFCIIEPRVKFFEIPLIKCINNVVIIGTCAFTAYLLLINLPWYLPDLGNGEGIVGSFYLIVF
LVIAAAVYSSTNIRYVRILSLVSTWLFLGLIALMWAGAFLSERSSVGEFFTTFALLGDYFANLHNFVLPINDYHEFYLFW
WFAWSIMIGQFTARFVSGMRTYQVLLAMMVFPSIPIAIWFTVLYYYSANAIPTAGLYNLAMVIVGVTFVINSLDSLVRLY
TDNLNLTVQRFGKARYIIGNITLISSLTLLFKLDFLQIQWVGALAIALILGCFAYILKNHSRTVADIDRSPIENKIDFTK
IELAN
>Mature_404_residues
TTWLSIGILFTFAAIAFVIYRWGNMKCIGVTPVRKFTFIAILFTSGLDVGLIMFPLTEFAGYADLVSSPEYGFSNPLAIE
FGFWAFLIWAFYFLTCFYFCIIEPRVKFFEIPLIKCINNVVIIGTCAFTAYLLLINLPWYLPDLGNGEGIVGSFYLIVFL
VIAAAVYSSTNIRYVRILSLVSTWLFLGLIALMWAGAFLSERSSVGEFFTTFALLGDYFANLHNFVLPINDYHEFYLFWW
FAWSIMIGQFTARFVSGMRTYQVLLAMMVFPSIPIAIWFTVLYYYSANAIPTAGLYNLAMVIVGVTFVINSLDSLVRLYT
DNLNLTVQRFGKARYIIGNITLISSLTLLFKLDFLQIQWVGALAIALILGCFAYILKNHSRTVADIDRSPIENKIDFTKI
ELAN

Specific function: Unknown

COG id: COG1292

COG function: function code M; Choline-glycine betaine transporter

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45992; Mature: 45861

Theoretical pI: Translated: 7.29; Mature: 7.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTWLSIGILFTFAAIAFVIYRWGNMKCIGVTPVRKFTFIAILFTSGLDVGLIMFPLTEF
CCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHCCCCHHHHHHHHHHH
AGYADLVSSPEYGFSNPLAIEFGFWAFLIWAFYFLTCFYFCIIEPRVKFFEIPLIKCINN
CCHHHHHCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCHHHHHHCC
VVIIGTCAFTAYLLLINLPWYLPDLGNGEGIVGSFYLIVFLVIAAAVYSSTNIRYVRILS
EEEEEHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
LVSTWLFLGLIALMWAGAFLSERSSVGEFFTTFALLGDYFANLHNFVLPINDYHEFYLFW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHH
WFAWSIMIGQFTARFVSGMRTYQVLLAMMVFPSIPIAIWFTVLYYYSANAIPTAGLYNLA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHH
MVIVGVTFVINSLDSLVRLYTDNLNLTVQRFGKARYIIGNITLISSLTLLFKLDFLQIQW
HHHHHHHHHHHHHHHHHHHHHCCCCEEHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHH
VGALAIALILGCFAYILKNHSRTVADIDRSPIENKIDFTKIELAN
HHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCEEEEEECC
>Mature Secondary Structure 
TTWLSIGILFTFAAIAFVIYRWGNMKCIGVTPVRKFTFIAILFTSGLDVGLIMFPLTEF
CHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHCCCCHHHHHHHHHHH
AGYADLVSSPEYGFSNPLAIEFGFWAFLIWAFYFLTCFYFCIIEPRVKFFEIPLIKCINN
CCHHHHHCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCHHHHHHCC
VVIIGTCAFTAYLLLINLPWYLPDLGNGEGIVGSFYLIVFLVIAAAVYSSTNIRYVRILS
EEEEEHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
LVSTWLFLGLIALMWAGAFLSERSSVGEFFTTFALLGDYFANLHNFVLPINDYHEFYLFW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHH
WFAWSIMIGQFTARFVSGMRTYQVLLAMMVFPSIPIAIWFTVLYYYSANAIPTAGLYNLA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHH
MVIVGVTFVINSLDSLVRLYTDNLNLTVQRFGKARYIIGNITLISSLTLLFKLDFLQIQW
HHHHHHHHHHHHHHHHHHHHHCCCCEEHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHH
VGALAIALILGCFAYILKNHSRTVADIDRSPIENKIDFTKIELAN
HHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA