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The map label for this gene is betI [H]

Identifier: 119945740

GI number: 119945740

Start: 2518829

End: 2519437

Strand: Direct

Name: betI [H]

Synonym: Ping_2070

Alternate gene names: 119945740

Gene position: 2518829-2519437 (Clockwise)

Preceding gene: 119945739

Following gene: 119945741

Centisome position: 55.24

GC content: 43.51

Gene sequence:

>609_bases
ATGTCAAGACCAGTGATGAAACAGCTCCGCCGACAGCAACTTATTGATGCCACGCTGGTATCAGTCGAACGTCATGGGCT
ACAGCACACTACTATTAATACCATCAGTGGTTTGGCGGGAATGTCATCGGGGATTATCAGCCATTACTTTGGCGGCAAAC
AGGGTTTAATAGAAGCAACCCTTAAATATCTTCTCGATGAATTAAAGCAGGCATTACTGGTCAGAACATCGAACCAAAAA
CTATCTCCTGCGATCAGACTTTCGATGATTGTTGAAGCCAATTTTACCGAGTTACAACGCTCCAAAGCAGTGGCTAAAAC
ATGGTTAAGTTTCTGGGCCCAGGCAATACATGATCCGGGACTGGCAAGACTTCAACATATCAATAACCAACGTTTATACA
GCAATCTGCTTTTTTCTTTTAAACAGCTTTTACCCGCGACTGCCGCAATTAATGCCGCCAAACAGAGCGCAGCAATGATT
GACGGTTTCTGGCTGCGCAGTGCGCTGAGTTCAACACCTGAAGAAGATTTTAAACAAGCCCAAATTTTATCTAAAGCCTT
TATTAAGGCTCTTATCGCGCAATACGGAGAAAATCAATGTCATCATTAG

Upstream 100 bases:

>100_bases
ACATTTAATTAACACTTGATAGTTAGAGCACGAATCATTAGGATAGTTGTTAATTGAATGTTCAATCAATAAAAATTTCA
ACGACACAGAGAAATTATTT

Downstream 100 bases:

>100_bases
TCGTTTATCAAAATTATATCCACGGTCAATATATCCCCAATGACACAGGTGAAACATTTGAAGTAATTAACCCTGCGACG
GGTCAGGTTAGCTATTTAGT

Product: transcriptional regulator BetI

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 202; Mature: 201

Protein sequence:

>202_residues
MSRPVMKQLRRQQLIDATLVSVERHGLQHTTINTISGLAGMSSGIISHYFGGKQGLIEATLKYLLDELKQALLVRTSNQK
LSPAIRLSMIVEANFTELQRSKAVAKTWLSFWAQAIHDPGLARLQHINNQRLYSNLLFSFKQLLPATAAINAAKQSAAMI
DGFWLRSALSSTPEEDFKQAQILSKAFIKALIAQYGENQCHH

Sequences:

>Translated_202_residues
MSRPVMKQLRRQQLIDATLVSVERHGLQHTTINTISGLAGMSSGIISHYFGGKQGLIEATLKYLLDELKQALLVRTSNQK
LSPAIRLSMIVEANFTELQRSKAVAKTWLSFWAQAIHDPGLARLQHINNQRLYSNLLFSFKQLLPATAAINAAKQSAAMI
DGFWLRSALSSTPEEDFKQAQILSKAFIKALIAQYGENQCHH
>Mature_201_residues
SRPVMKQLRRQQLIDATLVSVERHGLQHTTINTISGLAGMSSGIISHYFGGKQGLIEATLKYLLDELKQALLVRTSNQKL
SPAIRLSMIVEANFTELQRSKAVAKTWLSFWAQAIHDPGLARLQHINNQRLYSNLLFSFKQLLPATAAINAAKQSAAMID
GFWLRSALSSTPEEDFKQAQILSKAFIKALIAQYGENQCHH

Specific function: Repressor involved in choline regulation of the bet genes [H]

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH tetR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1786505, Length=189, Percent_Identity=44.973544973545, Blast_Score=149, Evalue=9e-38,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR015893
- InterPro:   IPR011075
- InterPro:   IPR017757
- InterPro:   IPR001647 [H]

Pfam domain/function: PF00440 TetR_N [H]

EC number: NA

Molecular weight: Translated: 22542; Mature: 22411

Theoretical pI: Translated: 10.51; Mature: 10.51

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRPVMKQLRRQQLIDATLVSVERHGLQHTTINTISGLAGMSSGIISHYFGGKQGLIEAT
CCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
LKYLLDELKQALLVRTSNQKLSPAIRLSMIVEANFTELQRSKAVAKTWLSFWAQAIHDPG
HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCH
LARLQHINNQRLYSNLLFSFKQLLPATAAINAAKQSAAMIDGFWLRSALSSTPEEDFKQA
HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
QILSKAFIKALIAQYGENQCHH
HHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
SRPVMKQLRRQQLIDATLVSVERHGLQHTTINTISGLAGMSSGIISHYFGGKQGLIEAT
CCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
LKYLLDELKQALLVRTSNQKLSPAIRLSMIVEANFTELQRSKAVAKTWLSFWAQAIHDPG
HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCH
LARLQHINNQRLYSNLLFSFKQLLPATAAINAAKQSAAMIDGFWLRSALSSTPEEDFKQA
HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
QILSKAFIKALIAQYGENQCHH
HHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA