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The map label for this gene is yiaN [C]

Identifier: 119945713

GI number: 119945713

Start: 2479215

End: 2480552

Strand: Reverse

Name: yiaN [C]

Synonym: Ping_2033

Alternate gene names: 119945713

Gene position: 2480552-2479215 (Counterclockwise)

Preceding gene: 119945714

Following gene: 119945712

Centisome position: 54.4

GC content: 38.71

Gene sequence:

>1338_bases
ATGATTGACTTTATCGGTGATATTTTTTCTGCAGAACTTGATCCCTATGTGATTACTTTTGCACTCGTTATTACTATGGT
TGTATTGCTTTTTATGAGCTTTCCGATGATTGTGCCGCTCGCTGTTGCTTGTTTGATTGGTTTACTGCATTTTTCAGATG
TTGATCCACAAGTTATTATTCAACAAATGGTGACCGGCATTTCGCCTACTGCATTGATTTCTGTCCCTATGTTTATTTTA
GCTGCTGATATTATGACGCGAGGCAAAACAGCAAACTATTTACTTGAACTTATCGAGGCATTTGTTGGACATAAACGTGG
TGGTTTACCGATCACAGCCTGTTTAAGTTGTACTTTATTTGGGTCTGTCTCAGGTTCTACGCAAGCAACCGTTGTCGCAG
TTGGTCAGATAATGAGGCCAAAGCTCCTTAAAGTGGGTTATAAAGACAGTTTTGTTATGTCCTTAATTATTAACGCGAGT
GATATCGCTTATTTAATTCCACCGAGTATCGCGCTTATTTTATTTGGCACCTTGGCAAATACGAGCGTGGGAGAGTTGTT
TGTTGCTGGGATTGCACCAGGTCTTGTACTGGCTTTGTTATTTTGTATTTATAGCTATGTTTACAGTATTCGACATAAGG
ATTCTATTGCGTTAGTTGATAAAAAAACCTGGCCTGAACGCCTTAAAGCAATTAAAAATGCCTTATTACCCTTAGGTTTT
CCAGCATTGATCATTGGTGGTATTTATTCGGGTATTGTTACTCCAACTGAAGCGGCTTCTTTTGCCGTACTGTATGCCAT
TATTGTCGAAGCCATTATTTATAGAGAGATCACTTTTTCAGATATTACTAAGGCAGCGTTAAATACGGGTTTAATCACGG
CAGTTGTCTTTATTTTAGTGGGCATTGGACAAGCATTTTCTTGGTATATTTCTTTTGAAATGATTCCGCAAGCATTACTT
GAACCGCTTGAACTCGGTAGCTCTTCGCCTGAATTTATTATGTTTGTTATTGCGTTATCATTCTTTATTGGTTGTATGTT
TGTTGACTCAATTGTAGTACTGCTGATTTTGACGCCGATATTTATGCCTATCATTACAGCTGCTGGACTTGATCCTGTGC
TTGTGGGGGTTTTAGTTGCATTACAAATGGCGATTGGATCGGCGACTCCTCCTTTTGGCTGTGATATTTTCACTGCGATA
GCGATATTTGATAGACCTTATATGGAAATCATTAGAGGGACTCCTCCCTTTATTGCTATCTTGTTATTGATGTCTGCCTT
ACTTATTTTCTTCCCTGAAATAGCATTGCTGCCACGAGACTTTCTGTTTGATAAATGA

Upstream 100 bases:

>100_bases
GATTACAGTATGCAAGTAGTTTTATTATGAATCTGTTACACCCAGAAATATATTTATCTTTTAGTGTTATTGAAACGAAA
GATAACCAGGATATGCAATT

Downstream 100 bases:

>100_bases
TCGTTAAAGCTGGACATTTCCAATGACTAAAAATACTCAAGGTTTTGCCCTTGCTATCTTTGGGGTGCTGTTACTAGCAC
CTGATGTTGTCCTGATGCGC

Product: TRAP dicarboxylate transporter, DctM subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 445; Mature: 445

Protein sequence:

>445_residues
MIDFIGDIFSAELDPYVITFALVITMVVLLFMSFPMIVPLAVACLIGLLHFSDVDPQVIIQQMVTGISPTALISVPMFIL
AADIMTRGKTANYLLELIEAFVGHKRGGLPITACLSCTLFGSVSGSTQATVVAVGQIMRPKLLKVGYKDSFVMSLIINAS
DIAYLIPPSIALILFGTLANTSVGELFVAGIAPGLVLALLFCIYSYVYSIRHKDSIALVDKKTWPERLKAIKNALLPLGF
PALIIGGIYSGIVTPTEAASFAVLYAIIVEAIIYREITFSDITKAALNTGLITAVVFILVGIGQAFSWYISFEMIPQALL
EPLELGSSSPEFIMFVIALSFFIGCMFVDSIVVLLILTPIFMPIITAAGLDPVLVGVLVALQMAIGSATPPFGCDIFTAI
AIFDRPYMEIIRGTPPFIAILLLMSALLIFFPEIALLPRDFLFDK

Sequences:

>Translated_445_residues
MIDFIGDIFSAELDPYVITFALVITMVVLLFMSFPMIVPLAVACLIGLLHFSDVDPQVIIQQMVTGISPTALISVPMFIL
AADIMTRGKTANYLLELIEAFVGHKRGGLPITACLSCTLFGSVSGSTQATVVAVGQIMRPKLLKVGYKDSFVMSLIINAS
DIAYLIPPSIALILFGTLANTSVGELFVAGIAPGLVLALLFCIYSYVYSIRHKDSIALVDKKTWPERLKAIKNALLPLGF
PALIIGGIYSGIVTPTEAASFAVLYAIIVEAIIYREITFSDITKAALNTGLITAVVFILVGIGQAFSWYISFEMIPQALL
EPLELGSSSPEFIMFVIALSFFIGCMFVDSIVVLLILTPIFMPIITAAGLDPVLVGVLVALQMAIGSATPPFGCDIFTAI
AIFDRPYMEIIRGTPPFIAILLLMSALLIFFPEIALLPRDFLFDK
>Mature_445_residues
MIDFIGDIFSAELDPYVITFALVITMVVLLFMSFPMIVPLAVACLIGLLHFSDVDPQVIIQQMVTGISPTALISVPMFIL
AADIMTRGKTANYLLELIEAFVGHKRGGLPITACLSCTLFGSVSGSTQATVVAVGQIMRPKLLKVGYKDSFVMSLIINAS
DIAYLIPPSIALILFGTLANTSVGELFVAGIAPGLVLALLFCIYSYVYSIRHKDSIALVDKKTWPERLKAIKNALLPLGF
PALIIGGIYSGIVTPTEAASFAVLYAIIVEAIIYREITFSDITKAALNTGLITAVVFILVGIGQAFSWYISFEMIPQALL
EPLELGSSSPEFIMFVIALSFFIGCMFVDSIVVLLILTPIFMPIITAAGLDPVLVGVLVALQMAIGSATPPFGCDIFTAI
AIFDRPYMEIIRGTPPFIAILLLMSALLIFFPEIALLPRDFLFDK

Specific function: Unknown

COG id: COG1593

COG function: function code G; TRAP-type C4-dicarboxylate transport system, large permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TRAP transporter large permease family [H]

Homologues:

Organism=Escherichia coli, GI48994950, Length=400, Percent_Identity=31.5, Blast_Score=178, Evalue=6e-46,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010656
- InterPro:   IPR004681 [H]

Pfam domain/function: PF06808 DctM [H]

EC number: NA

Molecular weight: Translated: 48013; Mature: 48013

Theoretical pI: Translated: 4.54; Mature: 4.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDFIGDIFSAELDPYVITFALVITMVVLLFMSFPMIVPLAVACLIGLLHFSDVDPQVII
CCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
QQMVTGISPTALISVPMFILAADIMTRGKTANYLLELIEAFVGHKRGGLPITACLSCTLF
HHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
GSVSGSTQATVVAVGQIMRPKLLKVGYKDSFVMSLIINASDIAYLIPPSIALILFGTLAN
HCCCCCCHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHCCCCCEEECCHHHHHHHHHHHCC
TSVGELFVAGIAPGLVLALLFCIYSYVYSIRHKDSIALVDKKTWPERLKAIKNALLPLGF
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHCCCCH
PALIIGGIYSGIVTPTEAASFAVLYAIIVEAIIYREITFSDITKAALNTGLITAVVFILV
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GIGQAFSWYISFEMIPQALLEPLELGSSSPEFIMFVIALSFFIGCMFVDSIVVLLILTPI
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FMPIITAAGLDPVLVGVLVALQMAIGSATPPFGCDIFTAIAIFDRPYMEIIRGTPPFIAI
HHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCHHHHHHCCCCHHHHH
LLLMSALLIFFPEIALLPRDFLFDK
HHHHHHHHHHHHHHHHCCHHHCCCC
>Mature Secondary Structure
MIDFIGDIFSAELDPYVITFALVITMVVLLFMSFPMIVPLAVACLIGLLHFSDVDPQVII
CCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
QQMVTGISPTALISVPMFILAADIMTRGKTANYLLELIEAFVGHKRGGLPITACLSCTLF
HHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
GSVSGSTQATVVAVGQIMRPKLLKVGYKDSFVMSLIINASDIAYLIPPSIALILFGTLAN
HCCCCCCHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHCCCCCEEECCHHHHHHHHHHHCC
TSVGELFVAGIAPGLVLALLFCIYSYVYSIRHKDSIALVDKKTWPERLKAIKNALLPLGF
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHCCCCH
PALIIGGIYSGIVTPTEAASFAVLYAIIVEAIIYREITFSDITKAALNTGLITAVVFILV
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GIGQAFSWYISFEMIPQALLEPLELGSSSPEFIMFVIALSFFIGCMFVDSIVVLLILTPI
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FMPIITAAGLDPVLVGVLVALQMAIGSATPPFGCDIFTAIAIFDRPYMEIIRGTPPFIAI
HHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCHHHHHHCCCCHHHHH
LLLMSALLIFFPEIALLPRDFLFDK
HHHHHHHHHHHHHHHHCCHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]