| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is 119945636
Identifier: 119945636
GI number: 119945636
Start: 2369774
End: 2370421
Strand: Direct
Name: 119945636
Synonym: Ping_1948
Alternate gene names: NA
Gene position: 2369774-2370421 (Clockwise)
Preceding gene: 119945633
Following gene: 119945637
Centisome position: 51.97
GC content: 41.2
Gene sequence:
>648_bases ATGGATAACCGTTACCGCGCCCAGTTTATAAACAGCTTGTCCGGTTTTAAGAGCGTTAACCTTATTGGCACGCAGGATTC CAACGGACAAACTAATCTTGCGATATTTAGCTCAGTTGTACACTTAGGCGCGTCACCTGCATTGGTTGCTTTTGTTATGC GGCCGGATAACGGATCAAGACATACTCTTGATAACATTATCAGCACAGAGCATTACACTATAAATCAAGTATCAGCTCAA TTTTATCAGGCAGCTCACCAAAGCTCTGCTTGCTATCCAAAAGAGGAAAGCGAATTTACCCGCTTAGACTTATCAGAAAG TTATATTAGCGATATTAATGCCCCCTTTGTTAAAGAAAGTCGCTTGAAGTATGCGGTTAAGTTAAAAGAAATCCTGCCAG TCTCGAGTAATAACACCCAGTTTATTATTGGGGAAATCACCCATGTCATTTGCGATGAGAGTGCTCTAAAAGACGATGGT TATATCGATATAGAAGCCTTAGAAACTGTGACTGTCTCCGGGTTAGACAGTTATCATATAAGCGTACGACTGGCTCGTTT AAGTTATGCAAAACCTGACAAGTCCTCAACTGAGATTTCATTAAATGGCTCAGAAAATGTTAGTGCTGACGCCAGGGGTA AAAGCTAA
Upstream 100 bases:
>100_bases CTTTTAAGCTGACACTTTCGTATCGTTATTATACAAATAATCAATATTTAGGAAGTACACCATCAATTACAAACATTATA ATAGTGACGATTTATCCCAA
Downstream 100 bases:
>100_bases AATGAGAATATGGCAATGGCTGGGCTACCTAGGACTTATTCCCTTTGTGGCTTGCCTGTGGTTATTAGAAATATCTATTA ACAGCTCTGCAAATAATTTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 215; Mature: 215
Protein sequence:
>215_residues MDNRYRAQFINSLSGFKSVNLIGTQDSNGQTNLAIFSSVVHLGASPALVAFVMRPDNGSRHTLDNIISTEHYTINQVSAQ FYQAAHQSSACYPKEESEFTRLDLSESYISDINAPFVKESRLKYAVKLKEILPVSSNNTQFIIGEITHVICDESALKDDG YIDIEALETVTVSGLDSYHISVRLARLSYAKPDKSSTEISLNGSENVSADARGKS
Sequences:
>Translated_215_residues MDNRYRAQFINSLSGFKSVNLIGTQDSNGQTNLAIFSSVVHLGASPALVAFVMRPDNGSRHTLDNIISTEHYTINQVSAQ FYQAAHQSSACYPKEESEFTRLDLSESYISDINAPFVKESRLKYAVKLKEILPVSSNNTQFIIGEITHVICDESALKDDG YIDIEALETVTVSGLDSYHISVRLARLSYAKPDKSSTEISLNGSENVSADARGKS >Mature_215_residues MDNRYRAQFINSLSGFKSVNLIGTQDSNGQTNLAIFSSVVHLGASPALVAFVMRPDNGSRHTLDNIISTEHYTINQVSAQ FYQAAHQSSACYPKEESEFTRLDLSESYISDINAPFVKESRLKYAVKLKEILPVSSNNTQFIIGEITHVICDESALKDDG YIDIEALETVTVSGLDSYHISVRLARLSYAKPDKSSTEISLNGSENVSADARGKS
Specific function: Unknown
COG id: COG1853
COG function: function code R; Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23648; Mature: 23648
Theoretical pI: Translated: 5.28; Mature: 5.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDNRYRAQFINSLSGFKSVNLIGTQDSNGQTNLAIFSSVVHLGASPALVAFVMRPDNGSR CCCHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHCCCCCEEEEEEECCCCCCC HTLDNIISTEHYTINQVSAQFYQAAHQSSACYPKEESEFTRLDLSESYISDINAPFVKES HHHHHHHCCCCEEHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCHHHHHHCCCCCHHHH RLKYAVKLKEILPVSSNNTQFIIGEITHVICDESALKDDGYIDIEALETVTVSGLDSYHI HHHHEEEHHHHCCCCCCCCEEEEEEHHHHHHCCCCCCCCCCEEEEEEEEEEECCCCCEEE SVRLARLSYAKPDKSSTEISLNGSENVSADARGKS EEEEEEEECCCCCCCCCEEEECCCCCCCCCCCCCC >Mature Secondary Structure MDNRYRAQFINSLSGFKSVNLIGTQDSNGQTNLAIFSSVVHLGASPALVAFVMRPDNGSR CCCHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHCCCCCEEEEEEECCCCCCC HTLDNIISTEHYTINQVSAQFYQAAHQSSACYPKEESEFTRLDLSESYISDINAPFVKES HHHHHHHCCCCEEHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCHHHHHHCCCCCHHHH RLKYAVKLKEILPVSSNNTQFIIGEITHVICDESALKDDGYIDIEALETVTVSGLDSYHI HHHHEEEHHHHCCCCCCCCEEEEEEHHHHHHCCCCCCCCCCEEEEEEEEEEECCCCCEEE SVRLARLSYAKPDKSSTEISLNGSENVSADARGKS EEEEEEEECCCCCCCCCEEEECCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA