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The map label for this gene is 119945593

Identifier: 119945593

GI number: 119945593

Start: 2310659

End: 2312308

Strand: Direct

Name: 119945593

Synonym: Ping_1899

Alternate gene names: NA

Gene position: 2310659-2312308 (Clockwise)

Preceding gene: 119945592

Following gene: 119945597

Centisome position: 50.68

GC content: 38.12

Gene sequence:

>1650_bases
ATGCAATGTGATGATATTTCCAGCCAATATTTAACCCTAGTCGATGCGATTAAAGCACTTGCTGATAATAGTGATGTAGA
CAAACAGTTCTCTATTGCACAGTCTGCTTTTATTAAAGCAGAAAAAGCCGTTGTTGGCGCATTATCTGATCTGCAGCTAT
TAGAAGAACTTGAGTCAAAAAAGCGCAAGCTTGCGGATATGCATATTGCACTTGCAAAACAGGAATTTTTATACAAAAAA
TGTTTATCAACTTTATCAAAATTGCAGCATGAATGCTTGCCCTGGTGGCATTATCGTATTTTAAAAGCATGCAAAATGCG
TGACATTATCAAGACATATAAACCGAGGGTTGATAAACAAAAAAACCTGTTTGTGCAGTTAAAAAGTGACTATGATATTT
TTTCGGCTAAATTAACCCAGGAAATAAAAGCGTGTGCGGTGATATGTAAAGTTCATTATGATGTTGTGTTCGCCCAAGCT
GATATTAATTTAGACAGTTCAGAAATTCAGCGTAAAGCCTTTGGGCACAGTACTCAGTTAAATTTATTACGTTCGCAGTT
ATCTGCCTGTGCATTTGAACTTCATCAAGCCTGGTTGGTCGCCAGTTACAAAAGTGGTTTTTCTCAAACTATTAATAAAT
TACCCGGTCTTTTACAAAATAAAATAGCACTGCCGGCGGATGCAAAAATAATGTGGCAATGCCTGTTTATGGTATGTCCT
GTTGTGTCATCTGCTTTTGCATCCGTTGCCAATCAATTTTCTAAACTTGGCCAAGGTGATATTGGCTGGTTATTTATTGA
TGAGTCAGGTCAGGCAACACCACCTCAAGCTATCGGTGCATTATTAAGAGCTAAACATGCCGTGGTGGTAGGCGATCCAC
TGCAAATCGAACCCGTATTTACAACTCCCCCTGATATTGTTGAATATTTAGGACGACGTTTATTAAAAGGTGATTGGCAG
ACTTGGTCACCGTCAGTGGTATCCGTACAAGAATTAGCGGATAGAGCGAATCCTTTTGGAACGAAAAAAATAGCAATAGG
GAAATGGTTGGGTAGCCCGCTGCGTGTTCATCGGCGCTGCAGTGATCCGATGTTTTCTATTTCGAATCAAATCGCCTATA
ACAATAAAATGATGCATGGCTTAAATGATATAACAGAACAGGAACCCTTCGTCTGGGGACCAAGTGGTTGGTTCGATGTA
AAAGGAAATGAAAAAAGCAAACATTATGTGCCGAAGCAGGCTGAGCATGTATTATCTATGTTGTATAAATTTGTTGAACG
TTATAAAAAATTACCCGATTGTTATATTATTTCGCCTTTTAGTAATGTTAAATTTGAGGTTAACAGCTACCTTAATAAAA
ATTTCAATCATAAGAATATTCAACAAGCAGATTTTAATGCGTGGTTAGAAGGACGAGTGGGTACTGTTCATACCTTTCAA
GGTAAAGAGGAGGAATTAGTTATTTTTATTTTAGGTGCTTCCGACAGTGCTGGTGCCGCTAACTGGGCAGCGGGCAAACC
TAACTTATTAAATGTTGCAGTAACCAGAGCTAAAAAACGGGTTTATCTGATTGGTTGTTATAAAAGATGGTCGGCTTTAC
CTCATTTTGAAGATGCCTTTGGCCTGTTAAATGAAAGTATCATTGATTAA

Upstream 100 bases:

>100_bases
TAAGTAAGATGATTGTTGGGGACTGGTTGCGGCAGCCCTTGGTAATGCAAGTAATCGTAATCGTTTTAGCAATAAATTGT
TTTTTGAAAAAACGTCAAAA

Downstream 100 bases:

>100_bases
TAAAAGTGACTTTCCATAAAAATAAGATGATAAATTATTATTATCCTGTTTAAATAATAAGTGAATGAGTTTTTATTTTT
AAAAAATTATTCTGATCTGT

Product: hypothetical protein

Products: NA

Alternate protein names: Superfamily I DNA/RNA Helicase; Superfamily I DNA And RNA Helicase; DNA2/NAM7 Helicase Family Protein; DNA Helicase; Superfamily I DNA Helicase; Phospholipase D/Transphosphatidylase; Superfamily I DNA And RNA Helicase And Helicase Subunits

Number of amino acids: Translated: 549; Mature: 549

Protein sequence:

>549_residues
MQCDDISSQYLTLVDAIKALADNSDVDKQFSIAQSAFIKAEKAVVGALSDLQLLEELESKKRKLADMHIALAKQEFLYKK
CLSTLSKLQHECLPWWHYRILKACKMRDIIKTYKPRVDKQKNLFVQLKSDYDIFSAKLTQEIKACAVICKVHYDVVFAQA
DINLDSSEIQRKAFGHSTQLNLLRSQLSACAFELHQAWLVASYKSGFSQTINKLPGLLQNKIALPADAKIMWQCLFMVCP
VVSSAFASVANQFSKLGQGDIGWLFIDESGQATPPQAIGALLRAKHAVVVGDPLQIEPVFTTPPDIVEYLGRRLLKGDWQ
TWSPSVVSVQELADRANPFGTKKIAIGKWLGSPLRVHRRCSDPMFSISNQIAYNNKMMHGLNDITEQEPFVWGPSGWFDV
KGNEKSKHYVPKQAEHVLSMLYKFVERYKKLPDCYIISPFSNVKFEVNSYLNKNFNHKNIQQADFNAWLEGRVGTVHTFQ
GKEEELVIFILGASDSAGAANWAAGKPNLLNVAVTRAKKRVYLIGCYKRWSALPHFEDAFGLLNESIID

Sequences:

>Translated_549_residues
MQCDDISSQYLTLVDAIKALADNSDVDKQFSIAQSAFIKAEKAVVGALSDLQLLEELESKKRKLADMHIALAKQEFLYKK
CLSTLSKLQHECLPWWHYRILKACKMRDIIKTYKPRVDKQKNLFVQLKSDYDIFSAKLTQEIKACAVICKVHYDVVFAQA
DINLDSSEIQRKAFGHSTQLNLLRSQLSACAFELHQAWLVASYKSGFSQTINKLPGLLQNKIALPADAKIMWQCLFMVCP
VVSSAFASVANQFSKLGQGDIGWLFIDESGQATPPQAIGALLRAKHAVVVGDPLQIEPVFTTPPDIVEYLGRRLLKGDWQ
TWSPSVVSVQELADRANPFGTKKIAIGKWLGSPLRVHRRCSDPMFSISNQIAYNNKMMHGLNDITEQEPFVWGPSGWFDV
KGNEKSKHYVPKQAEHVLSMLYKFVERYKKLPDCYIISPFSNVKFEVNSYLNKNFNHKNIQQADFNAWLEGRVGTVHTFQ
GKEEELVIFILGASDSAGAANWAAGKPNLLNVAVTRAKKRVYLIGCYKRWSALPHFEDAFGLLNESIID
>Mature_549_residues
MQCDDISSQYLTLVDAIKALADNSDVDKQFSIAQSAFIKAEKAVVGALSDLQLLEELESKKRKLADMHIALAKQEFLYKK
CLSTLSKLQHECLPWWHYRILKACKMRDIIKTYKPRVDKQKNLFVQLKSDYDIFSAKLTQEIKACAVICKVHYDVVFAQA
DINLDSSEIQRKAFGHSTQLNLLRSQLSACAFELHQAWLVASYKSGFSQTINKLPGLLQNKIALPADAKIMWQCLFMVCP
VVSSAFASVANQFSKLGQGDIGWLFIDESGQATPPQAIGALLRAKHAVVVGDPLQIEPVFTTPPDIVEYLGRRLLKGDWQ
TWSPSVVSVQELADRANPFGTKKIAIGKWLGSPLRVHRRCSDPMFSISNQIAYNNKMMHGLNDITEQEPFVWGPSGWFDV
KGNEKSKHYVPKQAEHVLSMLYKFVERYKKLPDCYIISPFSNVKFEVNSYLNKNFNHKNIQQADFNAWLEGRVGTVHTFQ
GKEEELVIFILGASDSAGAANWAAGKPNLLNVAVTRAKKRVYLIGCYKRWSALPHFEDAFGLLNESIID

Specific function: Unknown

COG id: COG1112

COG function: function code L; Superfamily I DNA and RNA helicases and helicase subunits

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 61887; Mature: 61887

Theoretical pI: Translated: 8.93; Mature: 8.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQCDDISSQYLTLVDAIKALADNSDVDKQFSIAQSAFIKAEKAVVGALSDLQLLEELESK
CCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KRKLADMHIALAKQEFLYKKCLSTLSKLQHECLPWWHYRILKACKMRDIIKTYKPRVDKQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCC
KNLFVQLKSDYDIFSAKLTQEIKACAVICKVHYDVVFAQADINLDSSEIQRKAFGHSTQL
CCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCHHHHHHHHCCCCHHH
NLLRSQLSACAFELHQAWLVASYKSGFSQTINKLPGLLQNKIALPADAKIMWQCLFMVCP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCHHHHHHHHHHHHH
VVSSAFASVANQFSKLGQGDIGWLFIDESGQATPPQAIGALLRAKHAVVVGDPLQIEPVF
HHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHHHHHHCCEEEECCCEEEEEEE
TTPPDIVEYLGRRLLKGDWQTWSPSVVSVQELADRANPFGTKKIAIGKWLGSPLRVHRRC
CCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCEEEHHHHCCCHHHHHHHC
SDPMFSISNQIAYNNKMMHGLNDITEQEPFVWGPSGWFDVKGNEKSKHYVPKQAEHVLSM
CCCHHHHHHHHHHCCHHHHHHHHHCCCCCEEECCCCEEECCCCCCCCCCCCHHHHHHHHH
LYKFVERYKKLPDCYIISPFSNVKFEVNSYLNKNFNHKNIQQADFNAWLEGRVGTVHTFQ
HHHHHHHHHCCCCEEEECCCCCCEEEEHHHHCCCCCCCCCCCCCHHHHHCCCCCEEEECC
GKEEELVIFILGASDSAGAANWAAGKPNLLNVAVTRAKKRVYLIGCYKRWSALPHFEDAF
CCCCEEEEEEEECCCCCCCCCCCCCCCCEEHHHHHHCCCEEEEEEEHHHHCCCCCHHHHH
GLLNESIID
HHHHHHHCC
>Mature Secondary Structure
MQCDDISSQYLTLVDAIKALADNSDVDKQFSIAQSAFIKAEKAVVGALSDLQLLEELESK
CCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KRKLADMHIALAKQEFLYKKCLSTLSKLQHECLPWWHYRILKACKMRDIIKTYKPRVDKQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCC
KNLFVQLKSDYDIFSAKLTQEIKACAVICKVHYDVVFAQADINLDSSEIQRKAFGHSTQL
CCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCHHHHHHHHCCCCHHH
NLLRSQLSACAFELHQAWLVASYKSGFSQTINKLPGLLQNKIALPADAKIMWQCLFMVCP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCHHHHHHHHHHHHH
VVSSAFASVANQFSKLGQGDIGWLFIDESGQATPPQAIGALLRAKHAVVVGDPLQIEPVF
HHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHHHHHHCCEEEECCCEEEEEEE
TTPPDIVEYLGRRLLKGDWQTWSPSVVSVQELADRANPFGTKKIAIGKWLGSPLRVHRRC
CCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCEEEHHHHCCCHHHHHHHC
SDPMFSISNQIAYNNKMMHGLNDITEQEPFVWGPSGWFDVKGNEKSKHYVPKQAEHVLSM
CCCHHHHHHHHHHCCHHHHHHHHHCCCCCEEECCCCEEECCCCCCCCCCCCHHHHHHHHH
LYKFVERYKKLPDCYIISPFSNVKFEVNSYLNKNFNHKNIQQADFNAWLEGRVGTVHTFQ
HHHHHHHHHCCCCEEEECCCCCCEEEEHHHHCCCCCCCCCCCCCHHHHHCCCCCEEEECC
GKEEELVIFILGASDSAGAANWAAGKPNLLNVAVTRAKKRVYLIGCYKRWSALPHFEDAF
CCCCEEEEEEEECCCCCCCCCCCCCCCCEEHHHHHHCCCEEEEEEEHHHHCCCCCHHHHH
GLLNESIID
HHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA