| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is 119945544
Identifier: 119945544
GI number: 119945544
Start: 2247669
End: 2248910
Strand: Direct
Name: 119945544
Synonym: Ping_1848
Alternate gene names: NA
Gene position: 2247669-2248910 (Clockwise)
Preceding gene: 119945543
Following gene: 119945545
Centisome position: 49.3
GC content: 40.74
Gene sequence:
>1242_bases ATGGCGGGTTATGATGCAGGGCAGGTTGCCGAGTTATTACGTAAAATTGGTTCACACGACGAGTTACTGGCAAATGCTTA TGTCTATGGATCGGTGGTCACTGATCAAGCCGAACAACGCACTATCAATCTGTTACATAAGGCGGGTCTGTTAAGACCGG ACGACGAGCCCGGTGAATTTCGCCTGACCACAGACTTTAAACGTATGCTCAATCGTTTAATGCGTAAACAAAGCAGTTAC CGTCAACTAACGGACATGGGTAAAGTCATTGAAGCATTGGATGAAACGGTTTATGACTTTCAACAAGCTGTGCAGGCAAA ACAGAGTGACGATGCGGAATTTTATCTTGATCAACTGGATGATCTGCTCTATGAAACCAAAGATGGTTTAAATACTAACC TTGAAAATATGCATTATGCGATTGTCAGTCAGTTTGGTTTTGTCAGTACGCTGACCAATAAAATAAGACAAAATGAACGT TATTTGAACCATGCACAAAATTTATTGACTGAGCTGCAGCAGATCGATCCCGAATCTTGTTATGAGTGGATTAACTGGCC TTGTCCAAATGACTTTGCCCGTAAAATAACCGGTTTTATTTACTGGTTTAACCAAACATTACCGCGTTTACGTTTTATTA TCGATAATATGCGTTTAAGTCTGTTTCGTTTGCGTCGGGATGAAAAACAGGCAAGTCAGTTGCGTAATATGGCACGTTAT TTACGTCAGCACCCGGAATTTGAACTTAAGGAGCAACTGTTTGAAGAACCTGGTTTCCCTGAATCATTAAAATTTGCGCC AGCAATGAACTTGTGCAGTTATGTTGATCCCCATAATACGGCAATAGAAACGCCATTAATGAATCTGGTGCAATCATTAC GCAAACAAAATAACCAACCCGTGAATAAACAACGAGAAAGCGCTACGGTGGTTATTAGCAGTATTGAAAAGCTTGTTTAT GAAAGTGATTTTTTTGAAGAGCAAAGCGATTCTTTATTTGAGCAGGCAATAGAGACTGAGCAGCCGGTCTCCGCTATTGC CTTTTGGCAAAAATACCAACTGGATTGGGTAAGACAAAACCAACATATTCATCCTAAGGCCTGGATTGAGTTGGTCTTTA GTTGTTATTGTAAATTAACCAATGACCAACAGGCCGCGCTGGATATCAAAATGATAGGCTCTGCCGATGTAGGGGTGCCG GATAATTATACGTATAATGATCTGGAGATTATTTTGCGTTAA
Upstream 100 bases:
>100_bases AATTTGACCTTATTTATATTTTAATTGAATTTTTAAATGATTCGGAAAAGGTTGAATTACCCGAAGAGGCACAGAGTCAG CAAGAGGAGTTACTCTTTTA
Downstream 100 bases:
>100_bases AAAGTAAAGGCTCGAAAACTTATAGCTTGAAGGCTTGAAGGCTTGAAGGCTCGAAGCTCGACTTTCGAAGCTCGCAGCTC AAAGGCTCGGCAGGACTGGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 413; Mature: 412
Protein sequence:
>413_residues MAGYDAGQVAELLRKIGSHDELLANAYVYGSVVTDQAEQRTINLLHKAGLLRPDDEPGEFRLTTDFKRMLNRLMRKQSSY RQLTDMGKVIEALDETVYDFQQAVQAKQSDDAEFYLDQLDDLLYETKDGLNTNLENMHYAIVSQFGFVSTLTNKIRQNER YLNHAQNLLTELQQIDPESCYEWINWPCPNDFARKITGFIYWFNQTLPRLRFIIDNMRLSLFRLRRDEKQASQLRNMARY LRQHPEFELKEQLFEEPGFPESLKFAPAMNLCSYVDPHNTAIETPLMNLVQSLRKQNNQPVNKQRESATVVISSIEKLVY ESDFFEEQSDSLFEQAIETEQPVSAIAFWQKYQLDWVRQNQHIHPKAWIELVFSCYCKLTNDQQAALDIKMIGSADVGVP DNYTYNDLEIILR
Sequences:
>Translated_413_residues MAGYDAGQVAELLRKIGSHDELLANAYVYGSVVTDQAEQRTINLLHKAGLLRPDDEPGEFRLTTDFKRMLNRLMRKQSSY RQLTDMGKVIEALDETVYDFQQAVQAKQSDDAEFYLDQLDDLLYETKDGLNTNLENMHYAIVSQFGFVSTLTNKIRQNER YLNHAQNLLTELQQIDPESCYEWINWPCPNDFARKITGFIYWFNQTLPRLRFIIDNMRLSLFRLRRDEKQASQLRNMARY LRQHPEFELKEQLFEEPGFPESLKFAPAMNLCSYVDPHNTAIETPLMNLVQSLRKQNNQPVNKQRESATVVISSIEKLVY ESDFFEEQSDSLFEQAIETEQPVSAIAFWQKYQLDWVRQNQHIHPKAWIELVFSCYCKLTNDQQAALDIKMIGSADVGVP DNYTYNDLEIILR >Mature_412_residues AGYDAGQVAELLRKIGSHDELLANAYVYGSVVTDQAEQRTINLLHKAGLLRPDDEPGEFRLTTDFKRMLNRLMRKQSSYR QLTDMGKVIEALDETVYDFQQAVQAKQSDDAEFYLDQLDDLLYETKDGLNTNLENMHYAIVSQFGFVSTLTNKIRQNERY LNHAQNLLTELQQIDPESCYEWINWPCPNDFARKITGFIYWFNQTLPRLRFIIDNMRLSLFRLRRDEKQASQLRNMARYL RQHPEFELKEQLFEEPGFPESLKFAPAMNLCSYVDPHNTAIETPLMNLVQSLRKQNNQPVNKQRESATVVISSIEKLVYE SDFFEEQSDSLFEQAIETEQPVSAIAFWQKYQLDWVRQNQHIHPKAWIELVFSCYCKLTNDQQAALDIKMIGSADVGVPD NYTYNDLEIILR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48289; Mature: 48158
Theoretical pI: Translated: 4.76; Mature: 4.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGYDAGQVAELLRKIGSHDELLANAYVYGSVVTDQAEQRTINLLHKAGLLRPDDEPGEF CCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCCCCCE RLTTDFKRMLNRLMRKQSSYRQLTDMGKVIEALDETVYDFQQAVQAKQSDDAEFYLDQLD EECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH DLLYETKDGLNTNLENMHYAIVSQFGFVSTLTNKIRQNERYLNHAQNLLTELQQIDPESC HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH YEWINWPCPNDFARKITGFIYWFNQTLPRLRFIIDNMRLSLFRLRRDEKQASQLRNMARY HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LRQHPEFELKEQLFEEPGFPESLKFAPAMNLCSYVDPHNTAIETPLMNLVQSLRKQNNQP HHHCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCC VNKQRESATVVISSIEKLVYESDFFEEQSDSLFEQAIETEQPVSAIAFWQKYQLDWVRQN CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCC QHIHPKAWIELVFSCYCKLTNDQQAALDIKMIGSADVGVPDNYTYNDLEIILR CCCCHHHHHHHHHHHHHHCCCCCHHHEEEEEECCCCCCCCCCCCCCHHHHEEC >Mature Secondary Structure AGYDAGQVAELLRKIGSHDELLANAYVYGSVVTDQAEQRTINLLHKAGLLRPDDEPGEF CCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCCCCCE RLTTDFKRMLNRLMRKQSSYRQLTDMGKVIEALDETVYDFQQAVQAKQSDDAEFYLDQLD EECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH DLLYETKDGLNTNLENMHYAIVSQFGFVSTLTNKIRQNERYLNHAQNLLTELQQIDPESC HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH YEWINWPCPNDFARKITGFIYWFNQTLPRLRFIIDNMRLSLFRLRRDEKQASQLRNMARY HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LRQHPEFELKEQLFEEPGFPESLKFAPAMNLCSYVDPHNTAIETPLMNLVQSLRKQNNQP HHHCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCC VNKQRESATVVISSIEKLVYESDFFEEQSDSLFEQAIETEQPVSAIAFWQKYQLDWVRQN CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCC QHIHPKAWIELVFSCYCKLTNDQQAALDIKMIGSADVGVPDNYTYNDLEIILR CCCCHHHHHHHHHHHHHHCCCCCHHHEEEEEECCCCCCCCCCCCCCHHHHEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA