| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is 119945519
Identifier: 119945519
GI number: 119945519
Start: 2212134
End: 2212616
Strand: Direct
Name: 119945519
Synonym: Ping_1823
Alternate gene names: NA
Gene position: 2212134-2212616 (Clockwise)
Preceding gene: 119945515
Following gene: 119945520
Centisome position: 48.52
GC content: 38.92
Gene sequence:
>483_bases ATGAATAAAGCACAAGTTTTTAGAGAGACAGTGATACAACCCGTTTTGGCTAGATTGGGGGAGGAAAACTTAGCGGCGGA AGAGCTTCTTTTAGGAACCGCTGTTCAAGAAAGCTTAAATTTTATGTATAGAAGGCAAGTTGGAGAAGGGCCTGCTAAAG GATATTTTCAGATGGAACCGTCTACACATAATGATATTTGGGATAACTATTTAAAATATCGTCAAGCGTTAGCAAACGAT ATTCTGTCTTTTCTTTCGAATGTTAATGCAAATAAGATTGATGAGCTGGAAACTAATGATAAATATGCGACCGCTATGGC GCGGGTTCATTATATGAGAGTTTCTGCACCCTTACCTAAAGCGGGTGATATTGCGGCACAAGCAAGATACTGGAAGCAGT ACTATAACACGCCATTGGGTAAGGGAGTGCCACATGAATATATTGAAAAATGGAATAAATATGTTATTGGTACTACACCT TGA
Upstream 100 bases:
>100_bases ATTAGTTAAAGCAAAATAGGTAGTGCGGCTTTTTGTGGATAGTAAAAGAGTTATCAGTCAGTGCGCTTAGAATCACAATG ATTATCAATAGGGGGATATT
Downstream 100 bases:
>100_bases GTGCAAGAAGATTTGACATGCTAAATATTAAGTTTAATAAAATAATTTACCTCCTTTTTATGTTGTTGGGGTTTTTATTT ATTAGTGCATGTAACGCGAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 160; Mature: 160
Protein sequence:
>160_residues MNKAQVFRETVIQPVLARLGEENLAAEELLLGTAVQESLNFMYRRQVGEGPAKGYFQMEPSTHNDIWDNYLKYRQALAND ILSFLSNVNANKIDELETNDKYATAMARVHYMRVSAPLPKAGDIAAQARYWKQYYNTPLGKGVPHEYIEKWNKYVIGTTP
Sequences:
>Translated_160_residues MNKAQVFRETVIQPVLARLGEENLAAEELLLGTAVQESLNFMYRRQVGEGPAKGYFQMEPSTHNDIWDNYLKYRQALAND ILSFLSNVNANKIDELETNDKYATAMARVHYMRVSAPLPKAGDIAAQARYWKQYYNTPLGKGVPHEYIEKWNKYVIGTTP >Mature_160_residues MNKAQVFRETVIQPVLARLGEENLAAEELLLGTAVQESLNFMYRRQVGEGPAKGYFQMEPSTHNDIWDNYLKYRQALAND ILSFLSNVNANKIDELETNDKYATAMARVHYMRVSAPLPKAGDIAAQARYWKQYYNTPLGKGVPHEYIEKWNKYVIGTTP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18304; Mature: 18304
Theoretical pI: Translated: 7.73; Mature: 7.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKAQVFRETVIQPVLARLGEENLAAEELLLGTAVQESLNFMYRRQVGEGPAKGYFQMEP CCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECC STHNDIWDNYLKYRQALANDILSFLSNVNANKIDELETNDKYATAMARVHYMRVSAPLPK CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCHHHHHHHHHHHHHHHCCCCCC AGDIAAQARYWKQYYNTPLGKGVPHEYIEKWNKYVIGTTP CCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCEECCCCC >Mature Secondary Structure MNKAQVFRETVIQPVLARLGEENLAAEELLLGTAVQESLNFMYRRQVGEGPAKGYFQMEP CCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECC STHNDIWDNYLKYRQALANDILSFLSNVNANKIDELETNDKYATAMARVHYMRVSAPLPK CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCHHHHHHHHHHHHHHHCCCCCC AGDIAAQARYWKQYYNTPLGKGVPHEYIEKWNKYVIGTTP CCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA