| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is 119945483
Identifier: 119945483
GI number: 119945483
Start: 2169096
End: 2169782
Strand: Direct
Name: 119945483
Synonym: Ping_1784
Alternate gene names: NA
Gene position: 2169096-2169782 (Clockwise)
Preceding gene: 119945481
Following gene: 119945490
Centisome position: 47.57
GC content: 41.19
Gene sequence:
>687_bases ATGCTTATTCTGCCTATACTTCTTACTATCAACACAAATTTAATGCCTACCTGCAAACGCAGCGACGGAGAAGAGGGGCG TTGTTGGGATTTTAAACTAAAGATTGCCTTTTCAGTAACGATGAATTTAGAAGGCAATTGCGTTTGGGATCCTGACTCGA TAGTGTTTATGAAAAGCATGCTTGCTGGTGAAAGTTATTTTAATTTCAGTAAACTAGAAGGAGCTCTTATGTCAAAATCA CTTCTAATTATTTTATTTGTCACGTCTTTCATATCAACAGGTATGGCGATTCAGCCGGCCGCAACGGTTGAACTTAAGTA CTCGCTGGAATTTATATTGAAGACTATTCTCGATTATAAAAATTTAAATTACCGACCCGAGATTCCGCTGCCGGAGCTAG TGGTCGCGAGTAAAACCAGTCTGAAACAATTTCAGGATGACGTTGAGCCACAATGGCAGATGCGCCCGGATATCATTATC AACACCTTTGTCGCAAAGCTTAATAAAATATACTTGCTGGATGAAAAAGCCTATTACGACAATTTCGAGCGCTGCATGGA TGACTCTCTGGCGCACGAACTGACCCACTACATTCAGGTGAAATACCGAGGGAGCCTTGATAACGAGAGTCTTGAGTGGG ACGCTGTTAATACACAGAACTGGTTTCGAGAAAAGTACTGTTTCTAA
Upstream 100 bases:
>100_bases TGATGAAGCACTGCTTGAACTATTTCGCCCTCATAGCGATGAAAAAAGAGGCGAATGTGGAAAACATGAGGTAAGCATAT TTTAGATATTACGAAAAAAG
Downstream 100 bases:
>100_bases TTGATACAATATTTTAGCCCAGCTGCGTGTCGCCGATAAGTATTGAGAGATGCTCCAAAACAAAGATCGAAGAAAAAAAT CTTAACATTCTGCTTTTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 228; Mature: 228
Protein sequence:
>228_residues MLILPILLTINTNLMPTCKRSDGEEGRCWDFKLKIAFSVTMNLEGNCVWDPDSIVFMKSMLAGESYFNFSKLEGALMSKS LLIILFVTSFISTGMAIQPAATVELKYSLEFILKTILDYKNLNYRPEIPLPELVVASKTSLKQFQDDVEPQWQMRPDIII NTFVAKLNKIYLLDEKAYYDNFERCMDDSLAHELTHYIQVKYRGSLDNESLEWDAVNTQNWFREKYCF
Sequences:
>Translated_228_residues MLILPILLTINTNLMPTCKRSDGEEGRCWDFKLKIAFSVTMNLEGNCVWDPDSIVFMKSMLAGESYFNFSKLEGALMSKS LLIILFVTSFISTGMAIQPAATVELKYSLEFILKTILDYKNLNYRPEIPLPELVVASKTSLKQFQDDVEPQWQMRPDIII NTFVAKLNKIYLLDEKAYYDNFERCMDDSLAHELTHYIQVKYRGSLDNESLEWDAVNTQNWFREKYCF >Mature_228_residues MLILPILLTINTNLMPTCKRSDGEEGRCWDFKLKIAFSVTMNLEGNCVWDPDSIVFMKSMLAGESYFNFSKLEGALMSKS LLIILFVTSFISTGMAIQPAATVELKYSLEFILKTILDYKNLNYRPEIPLPELVVASKTSLKQFQDDVEPQWQMRPDIII NTFVAKLNKIYLLDEKAYYDNFERCMDDSLAHELTHYIQVKYRGSLDNESLEWDAVNTQNWFREKYCF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26511; Mature: 26511
Theoretical pI: Translated: 4.72; Mature: 4.72
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLILPILLTINTNLMPTCKRSDGEEGRCWDFKLKIAFSVTMNLEGNCVWDPDSIVFMKSM CEEEEEEEEECCCCCCCCCCCCCCCCCEEEEEEEEEEEEEEECCCCEEECCCHHHHHHHH LAGESYFNFSKLEGALMSKSLLIILFVTSFISTGMAIQPAATVELKYSLEFILKTILDYK HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCEEEEEEHHHHHHHHHHHHHC NLNYRPEIPLPELVVASKTSLKQFQDDVEPQWQMRPDIIINTFVAKLNKIYLLDEKAYYD CCCCCCCCCCCCCEECCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCEEEEEECHHHHH NFERCMDDSLAHELTHYIQVKYRGSLDNESLEWDAVNTQNWFREKYCF HHHHHHHHHHHHHHHHHEEEEECCCCCCCCEEECCCCCHHHHHHHCCC >Mature Secondary Structure MLILPILLTINTNLMPTCKRSDGEEGRCWDFKLKIAFSVTMNLEGNCVWDPDSIVFMKSM CEEEEEEEEECCCCCCCCCCCCCCCCCEEEEEEEEEEEEEEECCCCEEECCCHHHHHHHH LAGESYFNFSKLEGALMSKSLLIILFVTSFISTGMAIQPAATVELKYSLEFILKTILDYK HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCEEEEEEHHHHHHHHHHHHHC NLNYRPEIPLPELVVASKTSLKQFQDDVEPQWQMRPDIIINTFVAKLNKIYLLDEKAYYD CCCCCCCCCCCCCEECCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCEEEEEECHHHHH NFERCMDDSLAHELTHYIQVKYRGSLDNESLEWDAVNTQNWFREKYCF HHHHHHHHHHHHHHHHHEEEEECCCCCCCCEEECCCCCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA