| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is 119945456
Identifier: 119945456
GI number: 119945456
Start: 2134466
End: 2135089
Strand: Direct
Name: 119945456
Synonym: Ping_1753
Alternate gene names: NA
Gene position: 2134466-2135089 (Clockwise)
Preceding gene: 119945455
Following gene: 119945463
Centisome position: 46.81
GC content: 43.43
Gene sequence:
>624_bases ATGACGAGCCGTAAAAGCTGTTTCTATTATGTGCATGATCCTATGTGCAGTTGGTGTTGGGCACACCTGCCTGAGTGGCA AAAATTAGAGGCGCATCTCTCGAAGTTATTACCCGTTCAATATGTTTTAGGAGGGCTGGCAGCCGACAGTAACGTGCCTA TGCCCATCGAGCAGCAGCAGGCCATTTGTGGTTATTGGAAGAAAATTAACCATCTCATCGGAACAGAGTTTAACTTCGAT TTTTGGTCGACAAATATTCCCAGACGTTCGACCTATCCTGCTTGCCGCGCCGTATTAGCTGCGAGTTGGCAAAATGCGAT GGAGGCGATGAATGTTGCCTTGCAAAAAGCGTATTATTTAAGGTCAATGAATCCGTCTAATATTGATACACATCTTATTT TAGCGAAAGAACTGGGCTTGAATATTAAGCAGTTCAGTGATGATTTAAGCTCGGAAAAATTAGAGAGTGAATTTAAGCAA CAGTTAGCATTCGCACGAAGTCTACCTATTCAGGGTTTCCCTTCAATGGTTTTGCTGCACCAAGGTGATTATTATCCCAT CGCCCTAGATTATAAGGATCATGCTGGCGCGATAGCGCAAGTCAATGAGATATTGGCAAACTAA
Upstream 100 bases:
>100_bases CGTTTTTTACGTTTAATGATTATTCAGTTATGATTGTGGTTGTTTATCAATGTGTACGCAGTATTAATATACTGTATTAT TTCCTTAAGGAGACCCCATT
Downstream 100 bases:
>100_bases ACAAGTTATTTACTTATTAGGTGATCTGTTTTTCCAATGCAATTTTAGATCCTTATTACTGATGCGAATTGGTATTAGGA TCTTATATGAGTGTCAGTTA
Product: hypothetical protein
Products: NA
Alternate protein names: Protein-Disulfide Isomerase; Dsba Oxidoreductase; Protein-Disulfide Isomerase-Like Protein; Dithiol-Disulfide Isomerase; DsbA Oxidoreductase; Thioredoxin
Number of amino acids: Translated: 207; Mature: 206
Protein sequence:
>207_residues MTSRKSCFYYVHDPMCSWCWAHLPEWQKLEAHLSKLLPVQYVLGGLAADSNVPMPIEQQQAICGYWKKINHLIGTEFNFD FWSTNIPRRSTYPACRAVLAASWQNAMEAMNVALQKAYYLRSMNPSNIDTHLILAKELGLNIKQFSDDLSSEKLESEFKQ QLAFARSLPIQGFPSMVLLHQGDYYPIALDYKDHAGAIAQVNEILAN
Sequences:
>Translated_207_residues MTSRKSCFYYVHDPMCSWCWAHLPEWQKLEAHLSKLLPVQYVLGGLAADSNVPMPIEQQQAICGYWKKINHLIGTEFNFD FWSTNIPRRSTYPACRAVLAASWQNAMEAMNVALQKAYYLRSMNPSNIDTHLILAKELGLNIKQFSDDLSSEKLESEFKQ QLAFARSLPIQGFPSMVLLHQGDYYPIALDYKDHAGAIAQVNEILAN >Mature_206_residues TSRKSCFYYVHDPMCSWCWAHLPEWQKLEAHLSKLLPVQYVLGGLAADSNVPMPIEQQQAICGYWKKINHLIGTEFNFDF WSTNIPRRSTYPACRAVLAASWQNAMEAMNVALQKAYYLRSMNPSNIDTHLILAKELGLNIKQFSDDLSSEKLESEFKQQ LAFARSLPIQGFPSMVLLHQGDYYPIALDYKDHAGAIAQVNEILAN
Specific function: Unknown
COG id: COG3531
COG function: function code O; Predicted protein-disulfide isomerase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23603; Mature: 23472
Theoretical pI: Translated: 6.86; Mature: 6.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSRKSCFYYVHDPMCSWCWAHLPEWQKLEAHLSKLLPVQYVLGGLAADSNVPMPIEQQQ CCCCCCEEEEECCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHH AICGYWKKINHLIGTEFNFDFWSTNIPRRSTYPACRAVLAASWQNAMEAMNVALQKAYYL HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH RSMNPSNIDTHLILAKELGLNIKQFSDDLSSEKLESEFKQQLAFARSLPIQGFPSMVLLH HCCCCCCCCHHEEEHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEE QGDYYPIALDYKDHAGAIAQVNEILAN CCCEEEEEECCCCCCCHHHHHHHHHCC >Mature Secondary Structure TSRKSCFYYVHDPMCSWCWAHLPEWQKLEAHLSKLLPVQYVLGGLAADSNVPMPIEQQQ CCCCCEEEEECCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHH AICGYWKKINHLIGTEFNFDFWSTNIPRRSTYPACRAVLAASWQNAMEAMNVALQKAYYL HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH RSMNPSNIDTHLILAKELGLNIKQFSDDLSSEKLESEFKQQLAFARSLPIQGFPSMVLLH HCCCCCCCCHHEEEHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEE QGDYYPIALDYKDHAGAIAQVNEILAN CCCEEEEEECCCCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA