| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
Click here to switch to the map view.
The map label for this gene is 119945446
Identifier: 119945446
GI number: 119945446
Start: 2122039
End: 2122533
Strand: Direct
Name: 119945446
Synonym: Ping_1743
Alternate gene names: NA
Gene position: 2122039-2122533 (Clockwise)
Preceding gene: 119945444
Following gene: 119945448
Centisome position: 46.54
GC content: 40.81
Gene sequence:
>495_bases ATGATCAAAGAACAACAGAATAACCCGTTACACGGCCTTAAATTAGAAGTGCTGCTGACAGAATTAGTTGAATTTTACGG TTGGGAGATACTGTCTACCGCTTTACGTTTTCATTGTTTTAAAACTAACCCGTCCATTGACGGTAGTCTCAAATTTCTGA GAAAGACTGAGTGGGCAAGAGTAAAATTAGAAGATTTTTATTTATACCGTTTTAAACGTATGCCTAAACCTGATCCGCAA GAGTATGAGTTAGCGCCTCGTGAGCGCGGTTTCGCACCGGGTCTTGTAGAACGTGATCCGATGATCTTGACGGTAGAATC AATAGAACTTTCCCAGGCTAAGGCTGCATCTAACTTTAAGGCTAAAACCGAGCAGCATGCTAAAGATAAAGTGTCTCATA AGCGTGAACACGGAACTGAGCGTAACAGTAACCATAAAGCAAATAAACCTGAGCCTTTATATGATCCCAGCAATCCTTGG GGAAAACTAAAATAA
Upstream 100 bases:
>100_bases TACTTTTCTATGCATTTGTTTTTTGTTAGTGATTGTGAGCCACTAAGACGTATAATAACATTATTAAAATACAGTCTTTA TATCGTTATTAGGAACACCC
Downstream 100 bases:
>100_bases GATCCCTATTTTGGTTTTTGATAATGAGGTTTTACTTAAGTAAGCGATAAATTGCGGGTTGTGAATCCTCTTTTGATGGT TCAGGAAGTTGAGTTTTGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 164; Mature: 164
Protein sequence:
>164_residues MIKEQQNNPLHGLKLEVLLTELVEFYGWEILSTALRFHCFKTNPSIDGSLKFLRKTEWARVKLEDFYLYRFKRMPKPDPQ EYELAPRERGFAPGLVERDPMILTVESIELSQAKAASNFKAKTEQHAKDKVSHKREHGTERNSNHKANKPEPLYDPSNPW GKLK
Sequences:
>Translated_164_residues MIKEQQNNPLHGLKLEVLLTELVEFYGWEILSTALRFHCFKTNPSIDGSLKFLRKTEWARVKLEDFYLYRFKRMPKPDPQ EYELAPRERGFAPGLVERDPMILTVESIELSQAKAASNFKAKTEQHAKDKVSHKREHGTERNSNHKANKPEPLYDPSNPW GKLK >Mature_164_residues MIKEQQNNPLHGLKLEVLLTELVEFYGWEILSTALRFHCFKTNPSIDGSLKFLRKTEWARVKLEDFYLYRFKRMPKPDPQ EYELAPRERGFAPGLVERDPMILTVESIELSQAKAASNFKAKTEQHAKDKVSHKREHGTERNSNHKANKPEPLYDPSNPW GKLK
Specific function: Unknown
COG id: COG4628
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19162; Mature: 19162
Theoretical pI: Translated: 9.76; Mature: 9.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKEQQNNPLHGLKLEVLLTELVEFYGWEILSTALRFHCFKTNPSIDGSLKFLRKTEWAR CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHCCHHE VKLEDFYLYRFKRMPKPDPQEYELAPRERGFAPGLVERDPMILTVESIELSQAKAASNFK EEHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHCCCH AKTEQHAKDKVSHKREHGTERNSNHKANKPEPLYDPSNPWGKLK HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MIKEQQNNPLHGLKLEVLLTELVEFYGWEILSTALRFHCFKTNPSIDGSLKFLRKTEWAR CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHCCHHE VKLEDFYLYRFKRMPKPDPQEYELAPRERGFAPGLVERDPMILTVESIELSQAKAASNFK EEHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHCCCH AKTEQHAKDKVSHKREHGTERNSNHKANKPEPLYDPSNPWGKLK HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA