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The map label for this gene is 119945410

Identifier: 119945410

GI number: 119945410

Start: 2078762

End: 2079787

Strand: Direct

Name: 119945410

Synonym: Ping_1704

Alternate gene names: NA

Gene position: 2078762-2079787 (Clockwise)

Preceding gene: 119945408

Following gene: 119945414

Centisome position: 45.59

GC content: 43.57

Gene sequence:

>1026_bases
ATGATTTTAATAAAATACTTTAGAACTATTTGTATACTGTTTTTATTCTCTCTGAGTATACTCGTGACAGGGGAGTCAGT
TGCCCGGCAAAAACCTTACGATAGTATTGTGGTGTTTGGTACTAGTCTAAGTGATACCGGTAATGCATTTATTCTATTAT
CTGACCCATCACGTTTTGGCTTCGATGAAAGTTGCGGTTTAGGTACACCGGTAAATGTCCCGCCTTATGATAAATTGGAT
GATTTATTAGTACCTGACGGATCCTATGCCAAAGGTGGCCATCATGTCAGCAATGGTGGAACCTGGATAGAAGAAATGGC
ACGCAGTAAAGGGCTGGCCGGATCCGTGCGCCCGACATTGAGAAATGATGGACTGAAAGCCCGCAATTATGCGGTCGGAG
GTGCAAGGGCATGGCCAAGAGAAGGTGATTTTCCCTGCCGCTTCAACTTATCAGATCAGCTTAATGCATATCTTGTGGAC
TTTGCAACAGCCTCGGCTGACACCTTGTTTGTTTTGGAATTCGGTGCTAATGATGTGAGGGATGCATTAGGTTCCCCAGT
TCCTTTAGTTGTCATTGAGAGGGCAATTTTTGAGATTTATAACACTATCGAAGAGCTTTATTCTCGAGGTGCCCGCCAGT
TTCTATTGATGAATGTACCTGATATTGGCCAGACGCCTGCTGTACAAATTTTGGATGGCAGTTTCCCGGACTTAGACCTG
GCTGTCGCTGCAACCTATTTAACGAATGCATTTAATGTCGCTCTTCAGGATCTTCAGGAAAATCTGAATTCATTTCCCAA
TATTGATGTGCGTATTTTTGATGCGAATGCTCTGCTTAATAAAATTATTGCCAATCCTGATGACTACGGGATCGAAGTCA
CTGATGTTCCCTGCGTAACGCCAAATGTTCCCCCTTACAAATGCAAAAAACCTGATACCTATTTGTTCTGGGATGGCATA
CATCCGACTAAGGCCGTTCATAAAATCATGGCGCTTGAAGCTGCTGGAGTTCTTTACACGCCCTAA

Upstream 100 bases:

>100_bases
AATGACCTCTCATTCGTGAAAGAGTAGAGTTCACAGCAACTTTGGGACTTGCTCAGATACCCGAGAAAAACACTTTTACT
GATAAATTTAGGAGATAATT

Downstream 100 bases:

>100_bases
CCATAAAGGTAAATGCTATAAAAAATAAAAGGTTGATCGCCGGCAAGAGGTCAACTTTTTTGTATTGATCTTTCCTCTTC
CGGTTATGCAGTACAATTCC

Product: lipolytic enzyme, G-D-S-L family protein

Products: NA

Alternate protein names: TL; Atypical phospholipase; Lecithin-dependent hemolysin; LDH; Lysophospholipase; Phospholipase A2 [H]

Number of amino acids: Translated: 341; Mature: 341

Protein sequence:

>341_residues
MILIKYFRTICILFLFSLSILVTGESVARQKPYDSIVVFGTSLSDTGNAFILLSDPSRFGFDESCGLGTPVNVPPYDKLD
DLLVPDGSYAKGGHHVSNGGTWIEEMARSKGLAGSVRPTLRNDGLKARNYAVGGARAWPREGDFPCRFNLSDQLNAYLVD
FATASADTLFVLEFGANDVRDALGSPVPLVVIERAIFEIYNTIEELYSRGARQFLLMNVPDIGQTPAVQILDGSFPDLDL
AVAATYLTNAFNVALQDLQENLNSFPNIDVRIFDANALLNKIIANPDDYGIEVTDVPCVTPNVPPYKCKKPDTYLFWDGI
HPTKAVHKIMALEAAGVLYTP

Sequences:

>Translated_341_residues
MILIKYFRTICILFLFSLSILVTGESVARQKPYDSIVVFGTSLSDTGNAFILLSDPSRFGFDESCGLGTPVNVPPYDKLD
DLLVPDGSYAKGGHHVSNGGTWIEEMARSKGLAGSVRPTLRNDGLKARNYAVGGARAWPREGDFPCRFNLSDQLNAYLVD
FATASADTLFVLEFGANDVRDALGSPVPLVVIERAIFEIYNTIEELYSRGARQFLLMNVPDIGQTPAVQILDGSFPDLDL
AVAATYLTNAFNVALQDLQENLNSFPNIDVRIFDANALLNKIIANPDDYGIEVTDVPCVTPNVPPYKCKKPDTYLFWDGI
HPTKAVHKIMALEAAGVLYTP
>Mature_341_residues
MILIKYFRTICILFLFSLSILVTGESVARQKPYDSIVVFGTSLSDTGNAFILLSDPSRFGFDESCGLGTPVNVPPYDKLD
DLLVPDGSYAKGGHHVSNGGTWIEEMARSKGLAGSVRPTLRNDGLKARNYAVGGARAWPREGDFPCRFNLSDQLNAYLVD
FATASADTLFVLEFGANDVRDALGSPVPLVVIERAIFEIYNTIEELYSRGARQFLLMNVPDIGQTPAVQILDGSFPDLDL
AVAATYLTNAFNVALQDLQENLNSFPNIDVRIFDANALLNKIIANPDDYGIEVTDVPCVTPNVPPYKCKKPDTYLFWDGI
HPTKAVHKIMALEAAGVLYTP

Specific function: Phospholipase hydrolyzing both fatty acid esters of phospholipid, i.e., it hydrolyzes phosphatidylcholine (PC) to lysophosphatidylcholine (LPC) and then LPC to glycerophosphorylcholine (GPC) [H]

COG id: COG3240

COG function: function code IR; Phospholipase/lecithinase/hemolysin

Gene ontology:

Cell location: Secreted [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 'GDSL' lipolytic enzyme family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013830
- InterPro:   IPR013831
- InterPro:   IPR001087
- InterPro:   IPR008265 [H]

Pfam domain/function: PF00657 Lipase_GDSL [H]

EC number: NA

Molecular weight: Translated: 37322; Mature: 37322

Theoretical pI: Translated: 4.51; Mature: 4.51

Prosite motif: PS00430 TONB_DEPENDENT_REC_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILIKYFRTICILFLFSLSILVTGESVARQKPYDSIVVFGTSLSDTGNAFILLSDPSRFG
CEEHHHHHHHHHHHHHHHHHEECCHHHHHCCCCCEEEEEECCCCCCCCEEEEEECCCCCC
FDESCGLGTPVNVPPYDKLDDLLVPDGSYAKGGHHVSNGGTWIEEMARSKGLAGSVRPTL
CCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCEEECCCCHHHHHHHHHCCCCCCCCCHH
RNDGLKARNYAVGGARAWPREGDFPCRFNLSDQLNAYLVDFATASADTLFVLEFGANDVR
HCCCCCCCEEECCCCCCCCCCCCCCEEECCCCCCCEEEEEEECCCCCEEEEEECCCCHHH
DALGSPVPLVVIERAIFEIYNTIEELYSRGARQFLLMNVPDIGQTPAVQILDGSFPDLDL
HHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCEEEEECCCCCCHHH
AVAATYLTNAFNVALQDLQENLNSFPNIDVRIFDANALLNKIIANPDDYGIEVTDVPCVT
HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHCCCCCCCEEEECCCCCC
PNVPPYKCKKPDTYLFWDGIHPTKAVHKIMALEAAGVLYTP
CCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCEEECC
>Mature Secondary Structure
MILIKYFRTICILFLFSLSILVTGESVARQKPYDSIVVFGTSLSDTGNAFILLSDPSRFG
CEEHHHHHHHHHHHHHHHHHEECCHHHHHCCCCCEEEEEECCCCCCCCEEEEEECCCCCC
FDESCGLGTPVNVPPYDKLDDLLVPDGSYAKGGHHVSNGGTWIEEMARSKGLAGSVRPTL
CCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCEEECCCCHHHHHHHHHCCCCCCCCCHH
RNDGLKARNYAVGGARAWPREGDFPCRFNLSDQLNAYLVDFATASADTLFVLEFGANDVR
HCCCCCCCEEECCCCCCCCCCCCCCEEECCCCCCCEEEEEEECCCCCEEEEEECCCCHHH
DALGSPVPLVVIERAIFEIYNTIEELYSRGARQFLLMNVPDIGQTPAVQILDGSFPDLDL
HHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCEEEEECCCCCCHHH
AVAATYLTNAFNVALQDLQENLNSFPNIDVRIFDANALLNKIIANPDDYGIEVTDVPCVT
HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHCCCCCCCEEEECCCCCC
PNVPPYKCKKPDTYLFWDGIHPTKAVHKIMALEAAGVLYTP
CCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3508495; 12620739; 1791426 [H]