| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
Click here to switch to the map view.
The map label for this gene is ykgG [C]
Identifier: 119945402
GI number: 119945402
Start: 2066097
End: 2066780
Strand: Direct
Name: ykgG [C]
Synonym: Ping_1692
Alternate gene names: 119945402
Gene position: 2066097-2066780 (Clockwise)
Preceding gene: 119945401
Following gene: 119945404
Centisome position: 45.31
GC content: 38.6
Gene sequence:
>684_bases ATGAATAAACACATAAGTGAACTCAGTAGAGCCAAAATATTTAGTGCGATTAAAGCGGCTAAACCAAACGTCACCATGGA TGTAAATACCATTAGGCAAGAGGCGCTTGAAATTCTAAAAGAAAGTGAATTCGCCCGTCCCAAACTTTTGTCTGAGGATG CAACGCAGGCCTTAGTACTTCGAATTGAAGCGGGGTTGGTTATCGGCACTACCTGTGAAACGCTTTCAATACTTGATGAA TTACCTCATTCAGTGAAGCAATTTTTTGACAAACACTCACTACCTCAAGAAATTAAAATACAAAATATTGATAAATTAGC AAAACTAAATTGGCAAGGTATCGCAACGGATAGTGATATTTTAGAAGATAACACCGTTGGCTTATGCTGGGCTGAGTACG GTGTTGCTGAAACTGGGTCGTTTGTTGTGCATTCAAGTCCCAAAATGCCCATTTTACTCAATTTTTTACCCTTGTATCTT ATTGCTGTTATTCCAAAATCGAAAATACTGCACTATATGGATGACTATGCCCTTATCGCCAATGAGATTGCTAAAAAGGG TGAGACTCCGCGCAATATGTGTTTAATATCAGGTGTTAGTGGCACAACTGATATAGAAGGTGTGTTAGTTCAAGGGGCTC ATGGGCCTGAAATTTTGCATATTATTATTGTTGAAGATCAGTAA
Upstream 100 bases:
>100_bases CCGTGATTTAATTGAGCCAGAGTCAACGACATTTATGCATCAGTATAAAAAAATAAAGAATGAAAAAATGAAAAAAGCCA AAAAGGGTGGAGCGTAACGA
Downstream 100 bases:
>100_bases AAAAGAAACCTTACATACCTTTCCTGTGTGATTAACAACCTAATTGTGAATAATTGGGTTGTTAATACCTAAAACCCTCA TTATTTATTAAGCACGTAAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 227; Mature: 227
Protein sequence:
>227_residues MNKHISELSRAKIFSAIKAAKPNVTMDVNTIRQEALEILKESEFARPKLLSEDATQALVLRIEAGLVIGTTCETLSILDE LPHSVKQFFDKHSLPQEIKIQNIDKLAKLNWQGIATDSDILEDNTVGLCWAEYGVAETGSFVVHSSPKMPILLNFLPLYL IAVIPKSKILHYMDDYALIANEIAKKGETPRNMCLISGVSGTTDIEGVLVQGAHGPEILHIIIVEDQ
Sequences:
>Translated_227_residues MNKHISELSRAKIFSAIKAAKPNVTMDVNTIRQEALEILKESEFARPKLLSEDATQALVLRIEAGLVIGTTCETLSILDE LPHSVKQFFDKHSLPQEIKIQNIDKLAKLNWQGIATDSDILEDNTVGLCWAEYGVAETGSFVVHSSPKMPILLNFLPLYL IAVIPKSKILHYMDDYALIANEIAKKGETPRNMCLISGVSGTTDIEGVLVQGAHGPEILHIIIVEDQ >Mature_227_residues MNKHISELSRAKIFSAIKAAKPNVTMDVNTIRQEALEILKESEFARPKLLSEDATQALVLRIEAGLVIGTTCETLSILDE LPHSVKQFFDKHSLPQEIKIQNIDKLAKLNWQGIATDSDILEDNTVGLCWAEYGVAETGSFVVHSSPKMPILLNFLPLYL IAVIPKSKILHYMDDYALIANEIAKKGETPRNMCLISGVSGTTDIEGVLVQGAHGPEILHIIIVEDQ
Specific function: Unknown
COG id: COG1556
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87081718, Length=106, Percent_Identity=37.7358490566038, Blast_Score=65, Evalue=5e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25054; Mature: 25054
Theoretical pI: Translated: 5.12; Mature: 5.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKHISELSRAKIFSAIKAAKPNVTMDVNTIRQEALEILKESEFARPKLLSEDATQALVL CCCHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHCCCCCCCHHCCHHHHEEEE RIEAGLVIGTTCETLSILDELPHSVKQFFDKHSLPQEIKIQNIDKLAKLNWQGIATDSDI EEECCEEEECHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCHHHHHHCCCCCCCCCCHH LEDNTVGLCWAEYGVAETGSFVVHSSPKMPILLNFLPLYLIAVIPKSKILHYMDDYALIA HCCCCEEEEEECCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH NEIAKKGETPRNMCLISGVSGTTDIEGVLVQGAHGPEILHIIIVEDQ HHHHHCCCCCCCEEEEECCCCCCCCCEEEEECCCCCEEEEEEEEECC >Mature Secondary Structure MNKHISELSRAKIFSAIKAAKPNVTMDVNTIRQEALEILKESEFARPKLLSEDATQALVL CCCHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHCCCCCCCHHCCHHHHEEEE RIEAGLVIGTTCETLSILDELPHSVKQFFDKHSLPQEIKIQNIDKLAKLNWQGIATDSDI EEECCEEEECHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCHHHHHHCCCCCCCCCCHH LEDNTVGLCWAEYGVAETGSFVVHSSPKMPILLNFLPLYLIAVIPKSKILHYMDDYALIA HCCCCEEEEEECCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH NEIAKKGETPRNMCLISGVSGTTDIEGVLVQGAHGPEILHIIIVEDQ HHHHHCCCCCCCEEEEECCCCCCCCCEEEEECCCCCEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA