Click here to switch to the map view.

The map label for this gene is 119945396

Identifier: 119945396

GI number: 119945396

Start: 2051031

End: 2053595

Strand: Direct

Name: 119945396

Synonym: Ping_1685

Alternate gene names: NA

Gene position: 2051031-2053595 (Clockwise)

Preceding gene: 119945395

Following gene: 119945397

Centisome position: 44.98

GC content: 45.69

Gene sequence:

>2565_bases
ATGGCTGATAACAGAGGGCTTGATACCCTTAATGCCAGGCTTGCTATTATCGGAATAGATGCGCAGTTTGAAGGATTGCC
TAATATCGATTATGTTGAGTCAGCTTTATACAAAGGTGAACGGTACAAAGGTGAACTGCATAAAGCGGATCTGTATTGGG
TTGATGGTCAAGATCTTGATCCGCTTTTAGAACAAAGTGATTATCCAACTTTGTGCAGAGATTCAGCCGCCCGTGTTGTC
GCAGCTAATAAACTTAGCGCACAACAGGTGGCGGTTATTATTCTGAGCGATCCAAGTGAGAGCATTGCAGTGACTTTGCA
GGAGTACTTTAGCTGCAGCATCGTTAATAACCTTGGTGTGGCCCTTACCCGCGGTGAAAAGCTGATTGCTGAATTTAATG
TCGCAGTCTTAATTATTGCCGCGAACCTGAATGCTGATTCAAATATAAAACAGGATCAAGCCAGTATCAGTTTTAGTGAT
GATTTTAGTGGTTACGCGCAGCATAACGGGGTGGTCAGTGTATTATTATCGGCTGCTGATTTTGCGGCCGCTAACGGCTG
TTACAGCTATGCAACGCTGCACAGCGCGGCCTGCAGTGCTAATACTGCAGAGCAAATGTTTGCTAGTGGTGCTGATACCG
CAGGTAAAATGCGCGCGACCATCGAGCGCTCTCTGCGCGCCGCAAAGATAAGTGCTGAGATGATTGATAGTGTTGAAGTG
TCGGCACTTAAAGCGCCTGCGCTCTGCATCTTAGAGACCAATGCATTATTGTATGCTTACAGCCACGGTCAAAAATTAAA
TACTGCCATTAGCTGCAGCAAAAGTGTGCTGGGGGACAACGGCGCCTTATCGCAGTTGCTGGGGTTATTAAACAGTGTTT
TTGTGCTGCAGCAGCGTTATCGTGCGGGGATTAAAGACTGGGCTAAGCCCTCATTCGAAAAACTTCAGGCCTGGTCTGAA
TCGCCTTTTTATTTTTTTAATAAGGCGACCCCGGCCTTTCCTAATGCCAATGGCAGTCCCCGTTATGTCGCTTACAGCTG
TTTATCACAAGATCATTATGCGCATATTATTTTGCAGGAAAATAATGACAAATTAGTGCACAGCAATGGTTTTAATGCCT
GTGCAGACTTGACCTTATTTGTGCTGGCGGAGAACAATCAAGTCGGGCTGACAGTGCAGTTACAGCGCTTGTCGGCCGAT
ATCTCGGGCGGCAACTTTAAAGCCTTAGCCAAACAATATTTTAAGGGATTTTCTGAGAGTCAGAATAAAGCCTTTAAAAT
GGTGCTGTTAGCCGAGTCGCCCGAGCAGTTAATAAAAGAGATAACCCTGGCATTAACCGGTATTAAGCATGCTTTTACAA
ATAATACCCATTGGAAAACCCCTAAAGGCAGTTATTTTAGTGCAACTCCGCTGTTGACCAAACACAATATCGCCTTTTTA
TATCCTGGAATAGGGGCAACCTATGTCGGCTTAGGGCAGGATCTGTTTCACCTGTTTCCTGAAATCTATTCAAATGTTGT
GAGCTTAGCCGATAATATCGGCAGCACCTTAAAAGAGCAGTTAATCTACCCGCGTTCCGTGACCCGCTTGGATTTCCGTG
AACTGAAACAGTTGAATCTTAGCCTGCGCAGTAGGCTGGCTGATATCGCTGAATGTGGTGTCGGTTTTGCCTGTGTTTTC
AGTCAAATATTTGCACAGGTCTTTAATATTAAAGCGGATTTTGCCGCGGGTTACAGCATGGGTGAAATCAGTATGTATGC
TGGATTAGGATGCTGGCATAAACCTGGTTTAATGAGTGCGCGCTTAGCGGATTCTGATACCTTTAATCACCGCTTGTCGG
GCGAGTTACGTGCGCTACGCGAAAGGTGGAATCTGCCCGATGTGAGCGATGGTACTGTTGAGCGAATCTGGGAAACCTAC
AGTATCAGAGGGAGTTTTGATGAGGTAAGCAAGGCTATTGAAAAGGGCGAACGTGTTTATGTTACCCTAATAAATACTGC
GGACAGTCTAACCATTGGCGGTTATCCGAAGGATTGTTTACAGGTGATTAAGCGCTTAGGGGTACGTGCTGTGCCACTTA
ATATAGGTAATGCAATTCACAGCGAAGTGGCCTATACGGAATATCAGGCGATGCAGAATCTTTACACTATGGCGGTCAGC
GAGCGGATTAACACAAAGATGTATTCCAGCTCATGTTACCTGCCTATTCCGCAGCACCCTAAAGCGATTGCGCTTAGTAT
CGCCAAGTGTCTCTGTGAGCCGGTTGATTTTCCGCGGCTGATTAATACCCTGCATGATAAGGGTGCTGAGGTGTTTATTG
AAATGGGCGCTGGAACGTCATTATCCGGCTGGACCAATAAGATTTTAAAAAGACCGGCAACAAGTGACAAAACCGCAGCT
GATTTTTTAACCGTGCCGGTTAATGCTAAAGGCTGCGATGATCAACTCAGTTACGCACGTTTAGCGGCAAAGCTTGTCAG
TGCGGGTATCGATATTAATTTAAGCAGCTTTTTCTATGGTTCGATTATCCAACCCGTGTGCACGTTTAGCGGCAAAGCTT
GTTAG

Upstream 100 bases:

>100_bases
CTGATTGATCGAGATAAACAGATTCTGGCAGAGATATCGGGCGCTGAAGTCACCTGCAGTGCCAGTTTAAACAAATTGTT
TAAACTGGCCGTTGAAGTTG

Downstream 100 bases:

>100_bases
TGCGGGTGTTGATATTAATTTAAGCCACTTTTTTACGGCTCGATCATCCAACTATCCAACCCGTGTTGGCAGTTAAATAA
AGAGATAATTTATGGAAGAC

Product: polyunsaturated fatty acid synthase PfaB

Products: NA

Alternate protein names: Omega-3 Polyunsaturated Fatty Acid Synthase PfaB; Polyketide-Type Polyunsaturated Fatty Acid Synthase PfaA; PfaB Family Protein; Omega-3 Polyunsaturated Fatty Acid Synthase PfaA; Erythronolide Synthase; Heterocyst Glycolipid Synthase; Polyketide Synthase; Polyunsaturated Fatty Acid Synthase PfaA; Polyunsaturated Fatty Acid Synthase PfaB; Beta Keto-Acyl Synthase; Beta-Ketoacyl Synthase HglC; LOW QUALITY PROTEIN Polyketide Synthase; Glycolipid Synthase; LOW QUALITY PROTEIN Beta-Ketoacyl Synthase; Short-Chain Dehydrogenase/Reductase; Multi-Domain Beta-Ketoacyl Polyketide Synthase; Modular PKS System

Number of amino acids: Translated: 854; Mature: 853

Protein sequence:

>854_residues
MADNRGLDTLNARLAIIGIDAQFEGLPNIDYVESALYKGERYKGELHKADLYWVDGQDLDPLLEQSDYPTLCRDSAARVV
AANKLSAQQVAVIILSDPSESIAVTLQEYFSCSIVNNLGVALTRGEKLIAEFNVAVLIIAANLNADSNIKQDQASISFSD
DFSGYAQHNGVVSVLLSAADFAAANGCYSYATLHSAACSANTAEQMFASGADTAGKMRATIERSLRAAKISAEMIDSVEV
SALKAPALCILETNALLYAYSHGQKLNTAISCSKSVLGDNGALSQLLGLLNSVFVLQQRYRAGIKDWAKPSFEKLQAWSE
SPFYFFNKATPAFPNANGSPRYVAYSCLSQDHYAHIILQENNDKLVHSNGFNACADLTLFVLAENNQVGLTVQLQRLSAD
ISGGNFKALAKQYFKGFSESQNKAFKMVLLAESPEQLIKEITLALTGIKHAFTNNTHWKTPKGSYFSATPLLTKHNIAFL
YPGIGATYVGLGQDLFHLFPEIYSNVVSLADNIGSTLKEQLIYPRSVTRLDFRELKQLNLSLRSRLADIAECGVGFACVF
SQIFAQVFNIKADFAAGYSMGEISMYAGLGCWHKPGLMSARLADSDTFNHRLSGELRALRERWNLPDVSDGTVERIWETY
SIRGSFDEVSKAIEKGERVYVTLINTADSLTIGGYPKDCLQVIKRLGVRAVPLNIGNAIHSEVAYTEYQAMQNLYTMAVS
ERINTKMYSSSCYLPIPQHPKAIALSIAKCLCEPVDFPRLINTLHDKGAEVFIEMGAGTSLSGWTNKILKRPATSDKTAA
DFLTVPVNAKGCDDQLSYARLAAKLVSAGIDINLSSFFYGSIIQPVCTFSGKAC

Sequences:

>Translated_854_residues
MADNRGLDTLNARLAIIGIDAQFEGLPNIDYVESALYKGERYKGELHKADLYWVDGQDLDPLLEQSDYPTLCRDSAARVV
AANKLSAQQVAVIILSDPSESIAVTLQEYFSCSIVNNLGVALTRGEKLIAEFNVAVLIIAANLNADSNIKQDQASISFSD
DFSGYAQHNGVVSVLLSAADFAAANGCYSYATLHSAACSANTAEQMFASGADTAGKMRATIERSLRAAKISAEMIDSVEV
SALKAPALCILETNALLYAYSHGQKLNTAISCSKSVLGDNGALSQLLGLLNSVFVLQQRYRAGIKDWAKPSFEKLQAWSE
SPFYFFNKATPAFPNANGSPRYVAYSCLSQDHYAHIILQENNDKLVHSNGFNACADLTLFVLAENNQVGLTVQLQRLSAD
ISGGNFKALAKQYFKGFSESQNKAFKMVLLAESPEQLIKEITLALTGIKHAFTNNTHWKTPKGSYFSATPLLTKHNIAFL
YPGIGATYVGLGQDLFHLFPEIYSNVVSLADNIGSTLKEQLIYPRSVTRLDFRELKQLNLSLRSRLADIAECGVGFACVF
SQIFAQVFNIKADFAAGYSMGEISMYAGLGCWHKPGLMSARLADSDTFNHRLSGELRALRERWNLPDVSDGTVERIWETY
SIRGSFDEVSKAIEKGERVYVTLINTADSLTIGGYPKDCLQVIKRLGVRAVPLNIGNAIHSEVAYTEYQAMQNLYTMAVS
ERINTKMYSSSCYLPIPQHPKAIALSIAKCLCEPVDFPRLINTLHDKGAEVFIEMGAGTSLSGWTNKILKRPATSDKTAA
DFLTVPVNAKGCDDQLSYARLAAKLVSAGIDINLSSFFYGSIIQPVCTFSGKAC
>Mature_853_residues
ADNRGLDTLNARLAIIGIDAQFEGLPNIDYVESALYKGERYKGELHKADLYWVDGQDLDPLLEQSDYPTLCRDSAARVVA
ANKLSAQQVAVIILSDPSESIAVTLQEYFSCSIVNNLGVALTRGEKLIAEFNVAVLIIAANLNADSNIKQDQASISFSDD
FSGYAQHNGVVSVLLSAADFAAANGCYSYATLHSAACSANTAEQMFASGADTAGKMRATIERSLRAAKISAEMIDSVEVS
ALKAPALCILETNALLYAYSHGQKLNTAISCSKSVLGDNGALSQLLGLLNSVFVLQQRYRAGIKDWAKPSFEKLQAWSES
PFYFFNKATPAFPNANGSPRYVAYSCLSQDHYAHIILQENNDKLVHSNGFNACADLTLFVLAENNQVGLTVQLQRLSADI
SGGNFKALAKQYFKGFSESQNKAFKMVLLAESPEQLIKEITLALTGIKHAFTNNTHWKTPKGSYFSATPLLTKHNIAFLY
PGIGATYVGLGQDLFHLFPEIYSNVVSLADNIGSTLKEQLIYPRSVTRLDFRELKQLNLSLRSRLADIAECGVGFACVFS
QIFAQVFNIKADFAAGYSMGEISMYAGLGCWHKPGLMSARLADSDTFNHRLSGELRALRERWNLPDVSDGTVERIWETYS
IRGSFDEVSKAIEKGERVYVTLINTADSLTIGGYPKDCLQVIKRLGVRAVPLNIGNAIHSEVAYTEYQAMQNLYTMAVSE
RINTKMYSSSCYLPIPQHPKAIALSIAKCLCEPVDFPRLINTLHDKGAEVFIEMGAGTSLSGWTNKILKRPATSDKTAAD
FLTVPVNAKGCDDQLSYARLAAKLVSAGIDINLSSFFYGSIIQPVCTFSGKAC

Specific function: Unknown

COG id: COG3321

COG function: function code Q; Polyketide synthase modules and related proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 93195; Mature: 93064

Theoretical pI: Translated: 6.60; Mature: 6.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADNRGLDTLNARLAIIGIDAQFEGLPNIDYVESALYKGERYKGELHKADLYWVDGQDLD
CCCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHCCCCCCCCEEECEEEEECCCCCC
PLLEQSDYPTLCRDSAARVVAANKLSAQQVAVIILSDPSESIAVTLQEYFSCSIVNNLGV
HHHHCCCCCCHHHCCCHHEEEECCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHCCCE
ALTRGEKLIAEFNVAVLIIAANLNADSNIKQDQASISFSDDFSGYAQHNGVVSVLLSAAD
EEECCCHHHEECCEEEEEEEECCCCCCCCCCCCCCEEECCCCCCHHHCCCHHHHHHHHHH
FAAANGCYSYATLHSAACSANTAEQMFASGADTAGKMRATIERSLRAAKISAEMIDSVEV
HHHCCCCHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
SALKAPALCILETNALLYAYSHGQKLNTAISCSKSVLGDNGALSQLLGLLNSVFVLQQRY
HHHCCCEEEEEECCEEEEEECCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
RAGIKDWAKPSFEKLQAWSESPFYFFNKATPAFPNANGSPRYVAYSCLSQDHYAHIILQE
HCCHHHHCCCCHHHHHHCCCCCEEEEECCCCCCCCCCCCCCEEEEEECCCCCEEEEEEEC
NNDKLVHSNGFNACADLTLFVLAENNQVGLTVQLQRLSADISGGNFKALAKQYFKGFSES
CCCEEEECCCCCCCCCEEEEEEECCCCEEEEEEEEEEECCCCCCCHHHHHHHHHHCCCCC
QNKAFKMVLLAESPEQLIKEITLALTGIKHAFTNNTHWKTPKGSYFSATPLLTKHNIAFL
CCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCCEEECCEEEE
YPGIGATYVGLGQDLFHLFPEIYSNVVSLADNIGSTLKEQLIYPRSVTRLDFRELKQLNL
ECCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
SLRSRLADIAECGVGFACVFSQIFAQVFNIKADFAAGYSMGEISMYAGLGCWHKPGLMSA
HHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHCCCCCCCCHHHHCCCCCCCCCCCEE
RLADSDTFNHRLSGELRALRERWNLPDVSDGTVERIWETYSIRGSFDEVSKAIEKGERVY
ECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHCCCEEE
VTLINTADSLTIGGYPKDCLQVIKRLGVRAVPLNIGNAIHSEVAYTEYQAMQNLYTMAVS
EEEEECCCCEEECCCCHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHH
ERINTKMYSSSCYLPIPQHPKAIALSIAKCLCEPVDFPRLINTLHDKGAEVFIEMGAGTS
HHHHHHEECCCCEECCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCEEEEEECCCCC
LSGWTNKILKRPATSDKTAADFLTVPVNAKGCDDQLSYARLAAKLVSAGIDINLSSFFYG
CCHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEHHHHHH
SIIQPVCTFSGKAC
HHHHHHHHCCCCCC
>Mature Secondary Structure 
ADNRGLDTLNARLAIIGIDAQFEGLPNIDYVESALYKGERYKGELHKADLYWVDGQDLD
CCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHCCCCCCCCEEECEEEEECCCCCC
PLLEQSDYPTLCRDSAARVVAANKLSAQQVAVIILSDPSESIAVTLQEYFSCSIVNNLGV
HHHHCCCCCCHHHCCCHHEEEECCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHCCCE
ALTRGEKLIAEFNVAVLIIAANLNADSNIKQDQASISFSDDFSGYAQHNGVVSVLLSAAD
EEECCCHHHEECCEEEEEEEECCCCCCCCCCCCCCEEECCCCCCHHHCCCHHHHHHHHHH
FAAANGCYSYATLHSAACSANTAEQMFASGADTAGKMRATIERSLRAAKISAEMIDSVEV
HHHCCCCHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
SALKAPALCILETNALLYAYSHGQKLNTAISCSKSVLGDNGALSQLLGLLNSVFVLQQRY
HHHCCCEEEEEECCEEEEEECCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
RAGIKDWAKPSFEKLQAWSESPFYFFNKATPAFPNANGSPRYVAYSCLSQDHYAHIILQE
HCCHHHHCCCCHHHHHHCCCCCEEEEECCCCCCCCCCCCCCEEEEEECCCCCEEEEEEEC
NNDKLVHSNGFNACADLTLFVLAENNQVGLTVQLQRLSADISGGNFKALAKQYFKGFSES
CCCEEEECCCCCCCCCEEEEEEECCCCEEEEEEEEEEECCCCCCCHHHHHHHHHHCCCCC
QNKAFKMVLLAESPEQLIKEITLALTGIKHAFTNNTHWKTPKGSYFSATPLLTKHNIAFL
CCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCCEEECCEEEE
YPGIGATYVGLGQDLFHLFPEIYSNVVSLADNIGSTLKEQLIYPRSVTRLDFRELKQLNL
ECCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
SLRSRLADIAECGVGFACVFSQIFAQVFNIKADFAAGYSMGEISMYAGLGCWHKPGLMSA
HHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHCCCCCCCCHHHHCCCCCCCCCCCEE
RLADSDTFNHRLSGELRALRERWNLPDVSDGTVERIWETYSIRGSFDEVSKAIEKGERVY
ECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHCCCEEE
VTLINTADSLTIGGYPKDCLQVIKRLGVRAVPLNIGNAIHSEVAYTEYQAMQNLYTMAVS
EEEEECCCCEEECCCCHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHH
ERINTKMYSSSCYLPIPQHPKAIALSIAKCLCEPVDFPRLINTLHDKGAEVFIEMGAGTS
HHHHHHEECCCCEECCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCEEEEEECCCCC
LSGWTNKILKRPATSDKTAADFLTVPVNAKGCDDQLSYARLAAKLVSAGIDINLSSFFYG
CCHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEHHHHHH
SIIQPVCTFSGKAC
HHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA