| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is 119945325
Identifier: 119945325
GI number: 119945325
Start: 1963830
End: 1964216
Strand: Direct
Name: 119945325
Synonym: Ping_1609
Alternate gene names: NA
Gene position: 1963830-1964216 (Clockwise)
Preceding gene: 119945324
Following gene: 119945326
Centisome position: 43.07
GC content: 34.37
Gene sequence:
>387_bases ATGTATAGCTTTTTAAAACATACTCATTTAACGTTGATATTAATAGCGATTGTGCTTTTTATCTTATGTTTTTACTGGAT AGTAACGGGGCATAAAAATGCCCAAAAAGTTATTTTCAAAAAAATATTATTACACACACATTTAACCATTGCGCTGATAG GTTTAGGACTGATGGGTGTTTTGCAGATCAATCCGTTTGAAAGCCAGAATTATTGGCTAATTGAAAAAATAGGTGCATTC ATTGGTTACTTAATCCTTGTTAGTGTGGCCTTGAATGAAAAAACCCGCAAAGGGATGCGCTTTTTAGCCTTTGTTGGTGT GTTTGGTTGGATTGTTTATATCGGACAACTCGTCTTCAGTAAACAAGCCATGATATTGCTAGGATAA
Upstream 100 bases:
>100_bases TATTACCATTAAAGACTACGGAGATAATGATCGCGTTACGATGGGATTGTTTAACCAACCTAATTCACTATAAAAATAAA CCTAATACTTGGAGAAATAG
Downstream 100 bases:
>100_bases AAAATGACAACAGTTTCCAAAAATGAAAAAACAGAATTTATTATAAATGAACAGTTTGATTTCGCAGAGCATTCACTTGT CGATGCTGCTATTTCTGTCG
Product: hypothetical protein
Products: NA
Alternate protein names: Invasion Gene Expression Up-Regulator
Number of amino acids: Translated: 128; Mature: 128
Protein sequence:
>128_residues MYSFLKHTHLTLILIAIVLFILCFYWIVTGHKNAQKVIFKKILLHTHLTIALIGLGLMGVLQINPFESQNYWLIEKIGAF IGYLILVSVALNEKTRKGMRFLAFVGVFGWIVYIGQLVFSKQAMILLG
Sequences:
>Translated_128_residues MYSFLKHTHLTLILIAIVLFILCFYWIVTGHKNAQKVIFKKILLHTHLTIALIGLGLMGVLQINPFESQNYWLIEKIGAF IGYLILVSVALNEKTRKGMRFLAFVGVFGWIVYIGQLVFSKQAMILLG >Mature_128_residues MYSFLKHTHLTLILIAIVLFILCFYWIVTGHKNAQKVIFKKILLHTHLTIALIGLGLMGVLQINPFESQNYWLIEKIGAF IGYLILVSVALNEKTRKGMRFLAFVGVFGWIVYIGQLVFSKQAMILLG
Specific function: Unknown
COG id: COG3094
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14597; Mature: 14597
Theoretical pI: Translated: 10.42; Mature: 10.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYSFLKHTHLTLILIAIVLFILCFYWIVTGHKNAQKVIFKKILLHTHLTIALIGLGLMGV CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH LQINPFESQNYWLIEKIGAFIGYLILVSVALNEKTRKGMRFLAFVGVFGWIVYIGQLVFS HCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC KQAMILLG CCHHEEEC >Mature Secondary Structure MYSFLKHTHLTLILIAIVLFILCFYWIVTGHKNAQKVIFKKILLHTHLTIALIGLGLMGV CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH LQINPFESQNYWLIEKIGAFIGYLILVSVALNEKTRKGMRFLAFVGVFGWIVYIGQLVFS HCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC KQAMILLG CCHHEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA