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The map label for this gene is ygbF [H]

Identifier: 119945310

GI number: 119945310

Start: 1948113

End: 1948409

Strand: Direct

Name: ygbF [H]

Synonym: Ping_1593

Alternate gene names: 119945310

Gene position: 1948113-1948409 (Clockwise)

Preceding gene: 119945309

Following gene: 119945319

Centisome position: 42.73

GC content: 42.76

Gene sequence:

>297_bases
ATGTCAATGGTCACAGTGGTAACAGAAGCTATTCCACCTCGTTTGCGGGGGAGATTAGCGGTTTGGCTATTAGAAGTTCG
AGCGGGTGTCTATGTAGGTGAGGTTTCTGGGCGAGTACGAGAGATGATCTGGTATCAGATTAATGAACTTGCTGAGAATG
GAAATGTTGTTATGGCATGGTCAACCAATACCGAATCAGGGTTTGATTTTGTCACTTACGGTGAAAATCGCCGTATGCCA
GTTGAGTTGGATGGATTGAGATTGGTCAAATTTAAACCTGAAATTAAAGAAAACTGA

Upstream 100 bases:

>100_bases
AAAACCACCAGAGCCTTACGAAAATGCACAGCCACCCGCTATTCCTATGCCTGAGACGATAGGTGATGACGGTCATCGTA
CTTCTTAACAAGGAATTAAT

Downstream 100 bases:

>100_bases
ACAAAATTTGCTCTTTAAAAATCGGTAATTATTGAAGTACTCTATTTATCCTTACAAAACAATGATATATACTTAGAGTG
TTCCCCGTGCCCACGGGGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 98; Mature: 97

Protein sequence:

>98_residues
MSMVTVVTEAIPPRLRGRLAVWLLEVRAGVYVGEVSGRVREMIWYQINELAENGNVVMAWSTNTESGFDFVTYGENRRMP
VELDGLRLVKFKPEIKEN

Sequences:

>Translated_98_residues
MSMVTVVTEAIPPRLRGRLAVWLLEVRAGVYVGEVSGRVREMIWYQINELAENGNVVMAWSTNTESGFDFVTYGENRRMP
VELDGLRLVKFKPEIKEN
>Mature_97_residues
SMVTVVTEAIPPRLRGRLAVWLLEVRAGVYVGEVSGRVREMIWYQINELAENGNVVMAWSTNTESGFDFVTYGENRRMPV
ELDGLRLVKFKPEIKEN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082153, Length=93, Percent_Identity=75.2688172043011, Blast_Score=147, Evalue=1e-37,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010152 [H]

Pfam domain/function: PF09707 Cas_Cas2CT1978 [H]

EC number: NA

Molecular weight: Translated: 11217; Mature: 11086

Theoretical pI: Translated: 5.17; Mature: 5.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSMVTVVTEAIPPRLRGRLAVWLLEVRAGVYVGEVSGRVREMIWYQINELAENGNVVMAW
CCCEEEEHHHCCCCCCCCCCEEEEEHHCCEEEECCCHHHHHHHHHHHHHHHCCCCEEEEE
STNTESGFDFVTYGENRRMPVELDGLRLVKFKPEIKEN
ECCCCCCCEEEEECCCCCCCEEECCEEEEEECCCCCCC
>Mature Secondary Structure 
SMVTVVTEAIPPRLRGRLAVWLLEVRAGVYVGEVSGRVREMIWYQINELAENGNVVMAW
CCEEEEHHHCCCCCCCCCCEEEEEHHCCEEEECCCHHHHHHHHHHHHHHHCCCCEEEEE
STNTESGFDFVTYGENRRMPVELDGLRLVKFKPEIKEN
ECCCCCCCEEEEECCCCCCCEEECCEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2656660; 9278503; 7567469 [H]