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The map label for this gene is ygcL [H]

Identifier: 119945308

GI number: 119945308

Start: 1945662

End: 1947128

Strand: Direct

Name: ygcL [H]

Synonym: Ping_1591

Alternate gene names: 119945308

Gene position: 1945662-1947128 (Clockwise)

Preceding gene: 119945307

Following gene: 119945309

Centisome position: 42.67

GC content: 39.88

Gene sequence:

>1467_bases
ATGAACCTGCTTAAAGACGATTTTATTTCAACCTCACAAGGCAAAATCTCCTTAAAAACAATTTTAACCGGTGAGCAGAA
CTATCAACTGCAATACTATTTTGATGAAATTCAGCTGGCAATGTTACAACTGTTAAGTTCGCTAAGCACTGTTGTATTAC
AACCAACGGTTCAAGAGCTTAAAGATTATTTAAAAAATGGATTAACACCTGAACAATATGAAGCTGCTTTGGACAAAGTA
GAAAGCCAATGGTTTGAAAGCGATTGTTTTATGCAATCTAAACCGCCAACTAATGCTAAATGGCCTGATGCCCCAATTAC
CAAGTTACTATCTGGCATTGAATGTGGAACATCTGCTAATGCGATGGGGCTTTTCTCGGAAATTGAACAAGCAGAAATAA
GCTGTACCGACTGCATGCATGCATTGAATTATAACTTGCACATGAATATCAAGGGTGAATGCTTTGGTCCTACAGGTGCC
ACCGGTATTCGAGGTGGAGGGGCAATTAGTACCTTAATCGCAGGTGAAAATTTAAAACAAACACTTTTGAATAATACCAT
TGCCAAAGATTATTTTAATGATTATGCACAACTTGACAGCGATGCCGAGCAGAGACCGATGTGGGTAGCCCCCTTATCAG
GGAGCGTTTATCAGGCATCAAAAATCGGTATTAATCGTGGTTTATTTGCTTTGGCGTATCACATCGGTTTTAACATTGAA
GATAAACCTTGTCTTTGTGATGTTTGCGGTAGTGAGTCGGAACAATCAGTAAAAACATTTAATCGTGAAAAATATAAAGG
TAATTATGGTTCAACTAAAAATGGACGAGAAGCTGGGGCTGGCTGGTGGCCACATCCTTATACACCGCGAACCATAAAAG
AAGAAGGGGCTTTTGCGGTGTGTGCGCGTGATCAAAACTGGCAAAGTTGGCAAGAACTTGGAAGTTATATCGTGGGCAAA
GAAACGGATAAAGCGACGCTAGAGCCTGCTTATATTATTAAGCAATTTCAATATATGAAAACCCCGCGTCAAACCAATTT
ATTAGTCGGTGGCAATATTGCGGATCAAGGAGGGATTACGGGTCGGGTATATGATTTGTATTCCATGCCCTCATCGTTGA
ATAAACACTTGAGCAAAGTGACTCAGGTACTTGATTCAGGGCTTGATCAAAAAAACCGCTTATCGCAGGCATTTAACAAA
ATGTTTGGCGCAGGCTATGACAAAAATTTTGTTGGGGGAATTAAAGAAAATGCGATGTACCGCTTTACGGCAAATGCTCA
GCAAATTATCCAACGAACCCTGCTTGATGTTGAACGCAAAGAAGCCACTGAATTAAGAAAAACAGCCGTCATTGAACTTA
AGCAAGAAGCACAACGGATCTTTATGGGAGTTCAACGAAAATATCAGCATGATCTTCCTCTTTTTAAAGCATTAGTAAAA
GGAGAGAGCGCACTCTATCGAAAATAA

Upstream 100 bases:

>100_bases
GTGCGCGACTTGATCACCGCAATACCACGCAAATACGCCATGCGGACAGTCTATGTTTGCGGTCAAATAGCAAAAGTACA
GAATGATAAGGAGGAAATGA

Downstream 100 bases:

>100_bases
CAAAGAGAATACCTTATCGAAGGGGTATTGCCATTAACATAAGGAGGTTGAAAGGTGACATTTATTCCCCTTAAACCCAT
CCCAATAAAAGCGCGAACGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 488; Mature: 488

Protein sequence:

>488_residues
MNLLKDDFISTSQGKISLKTILTGEQNYQLQYYFDEIQLAMLQLLSSLSTVVLQPTVQELKDYLKNGLTPEQYEAALDKV
ESQWFESDCFMQSKPPTNAKWPDAPITKLLSGIECGTSANAMGLFSEIEQAEISCTDCMHALNYNLHMNIKGECFGPTGA
TGIRGGGAISTLIAGENLKQTLLNNTIAKDYFNDYAQLDSDAEQRPMWVAPLSGSVYQASKIGINRGLFALAYHIGFNIE
DKPCLCDVCGSESEQSVKTFNREKYKGNYGSTKNGREAGAGWWPHPYTPRTIKEEGAFAVCARDQNWQSWQELGSYIVGK
ETDKATLEPAYIIKQFQYMKTPRQTNLLVGGNIADQGGITGRVYDLYSMPSSLNKHLSKVTQVLDSGLDQKNRLSQAFNK
MFGAGYDKNFVGGIKENAMYRFTANAQQIIQRTLLDVERKEATELRKTAVIELKQEAQRIFMGVQRKYQHDLPLFKALVK
GESALYRK

Sequences:

>Translated_488_residues
MNLLKDDFISTSQGKISLKTILTGEQNYQLQYYFDEIQLAMLQLLSSLSTVVLQPTVQELKDYLKNGLTPEQYEAALDKV
ESQWFESDCFMQSKPPTNAKWPDAPITKLLSGIECGTSANAMGLFSEIEQAEISCTDCMHALNYNLHMNIKGECFGPTGA
TGIRGGGAISTLIAGENLKQTLLNNTIAKDYFNDYAQLDSDAEQRPMWVAPLSGSVYQASKIGINRGLFALAYHIGFNIE
DKPCLCDVCGSESEQSVKTFNREKYKGNYGSTKNGREAGAGWWPHPYTPRTIKEEGAFAVCARDQNWQSWQELGSYIVGK
ETDKATLEPAYIIKQFQYMKTPRQTNLLVGGNIADQGGITGRVYDLYSMPSSLNKHLSKVTQVLDSGLDQKNRLSQAFNK
MFGAGYDKNFVGGIKENAMYRFTANAQQIIQRTLLDVERKEATELRKTAVIELKQEAQRIFMGVQRKYQHDLPLFKALVK
GESALYRK
>Mature_488_residues
MNLLKDDFISTSQGKISLKTILTGEQNYQLQYYFDEIQLAMLQLLSSLSTVVLQPTVQELKDYLKNGLTPEQYEAALDKV
ESQWFESDCFMQSKPPTNAKWPDAPITKLLSGIECGTSANAMGLFSEIEQAEISCTDCMHALNYNLHMNIKGECFGPTGA
TGIRGGGAISTLIAGENLKQTLLNNTIAKDYFNDYAQLDSDAEQRPMWVAPLSGSVYQASKIGINRGLFALAYHIGFNIE
DKPCLCDVCGSESEQSVKTFNREKYKGNYGSTKNGREAGAGWWPHPYTPRTIKEEGAFAVCARDQNWQSWQELGSYIVGK
ETDKATLEPAYIIKQFQYMKTPRQTNLLVGGNIADQGGITGRVYDLYSMPSSLNKHLSKVTQVLDSGLDQKNRLSQAFNK
MFGAGYDKNFVGGIKENAMYRFTANAQQIIQRTLLDVERKEATELRKTAVIELKQEAQRIFMGVQRKYQHDLPLFKALVK
GESALYRK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789118, Length=507, Percent_Identity=24.65483234714, Blast_Score=127, Evalue=1e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013381 [H]

Pfam domain/function: PF09481 CRISPR_Cse1 [H]

EC number: NA

Molecular weight: Translated: 54637; Mature: 54637

Theoretical pI: Translated: 7.05; Mature: 7.05

Prosite motif: PS00136 SUBTILASE_ASP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLLKDDFISTSQGKISLKTILTGEQNYQLQYYFDEIQLAMLQLLSSLSTVVLQPTVQEL
CCCCHHHCCCCCCCCEEEEEEEECCCCCEEEEEHHHHHHHHHHHHHHHHHHHHCHHHHHH
KDYLKNGLTPEQYEAALDKVESQWFESDCFMQSKPPTNAKWPDAPITKLLSGIECGTSAN
HHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCC
AMGLFSEIEQAEISCTDCMHALNYNLHMNIKGECFGPTGATGIRGGGAISTLIAGENLKQ
HHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECCCCCCCCCCCCHHHHHHCCCHHHH
TLLNNTIAKDYFNDYAQLDSDAEQRPMWVAPLSGSVYQASKIGINRGLFALAYHIGFNIE
HHHHHHHHHHHHHHHHHCCCCHHHCCEEEEECCCCEEEHHHHCCCCCHHHHHHHHCCCCC
DKPCLCDVCGSESEQSVKTFNREKYKGNYGSTKNGREAGAGWWPHPYTPRTIKEEGAFAV
CCCCEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEE
CARDQNWQSWQELGSYIVGKETDKATLEPAYIIKQFQYMKTPRQTNLLVGGNIADQGGIT
EECCCCHHHHHHHHHEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCC
GRVYDLYSMPSSLNKHLSKVTQVLDSGLDQKNRLSQAFNKMFGAGYDKNFVGGIKENAMY
EEEEEHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEE
RFTANAQQIIQRTLLDVERKEATELRKTAVIELKQEAQRIFMGVQRKYQHDLPLFKALVK
EEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHC
GESALYRK
CCHHHCCC
>Mature Secondary Structure
MNLLKDDFISTSQGKISLKTILTGEQNYQLQYYFDEIQLAMLQLLSSLSTVVLQPTVQEL
CCCCHHHCCCCCCCCEEEEEEEECCCCCEEEEEHHHHHHHHHHHHHHHHHHHHCHHHHHH
KDYLKNGLTPEQYEAALDKVESQWFESDCFMQSKPPTNAKWPDAPITKLLSGIECGTSAN
HHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCC
AMGLFSEIEQAEISCTDCMHALNYNLHMNIKGECFGPTGATGIRGGGAISTLIAGENLKQ
HHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECCCCCCCCCCCCHHHHHHCCCHHHH
TLLNNTIAKDYFNDYAQLDSDAEQRPMWVAPLSGSVYQASKIGINRGLFALAYHIGFNIE
HHHHHHHHHHHHHHHHHCCCCHHHCCEEEEECCCCEEEHHHHCCCCCHHHHHHHHCCCCC
DKPCLCDVCGSESEQSVKTFNREKYKGNYGSTKNGREAGAGWWPHPYTPRTIKEEGAFAV
CCCCEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEE
CARDQNWQSWQELGSYIVGKETDKATLEPAYIIKQFQYMKTPRQTNLLVGGNIADQGGIT
EECCCCHHHHHHHHHEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCC
GRVYDLYSMPSSLNKHLSKVTQVLDSGLDQKNRLSQAFNKMFGAGYDKNFVGGIKENAMY
EEEEEHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEE
RFTANAQQIIQRTLLDVERKEATELRKTAVIELKQEAQRIFMGVQRKYQHDLPLFKALVK
EEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHC
GESALYRK
CCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]